RNA–Protein interactions for RNA: ENST00000495221.1

PDE1C-211, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-211ENST00000495221 CENPJQ9HC77 1338 aaPredicted RBP31.2■■■□□ 2.58
PDE1C-211ENST00000495221 PHRF1Q9P1Y6 1649 aaKnown RBP31.2■■■□□ 2.58
PDE1C-211ENST00000495221 CCDC61Q9Y6R9 512 aa31.19■■■□□ 2.58
PDE1C-211ENST00000495221 VPS72Q15906 364 aa31.18■■■□□ 2.58
PDE1C-211ENST00000495221 SIN3AQ96ST3 1273 aa31.18■■■□□ 2.58
PDE1C-211ENST00000495221 PLEKHG5O94827 1062 aa31.17■■■□□ 2.58
PDE1C-211ENST00000495221 PAK3O75914 559 aaPredicted RBP31.15■■■□□ 2.58
PDE1C-211ENST00000495221 PLEKHG3A1L390 1219 aa31.14■■■□□ 2.58
PDE1C-211ENST00000495221 FAM83GA6ND36 823 aa31.13■■■□□ 2.57
PDE1C-211ENST00000495221 EP400Q96L91 3159 aa31.13■■■□□ 2.57
PDE1C-211ENST00000495221 ACEP12821 1306 aa31.12■■■□□ 2.57
PDE1C-211ENST00000495221 PPIP5K1Q6PFW1 1433 aa31.09■■■□□ 2.57
PDE1C-211ENST00000495221 NEUROD1Q13562 356 aa31.09■■■□□ 2.57
PDE1C-211ENST00000495221 NBPF8Q3BBV2 869 aa31.09■■■□□ 2.57
PDE1C-211ENST00000495221 SRPK2P78362 688 aaKnown RBP31.08■■■□□ 2.57
PDE1C-211ENST00000495221 ROCK2O75116 1388 aaKnown RBP31.07■■■□□ 2.56
PDE1C-211ENST00000495221 ONECUT3O60422 494 aaPredicted RBP31.05■■■□□ 2.56
PDE1C-211ENST00000495221 CCDC125Q86Z20 511 aa31.05■■■□□ 2.56
PDE1C-211ENST00000495221 BTG4Q9NY30 223 aa31.05■■■□□ 2.56
PDE1C-211ENST00000495221 CCDC9Q9Y3X0 531 aaKnown RBP31.05■■■□□ 2.56
PDE1C-211ENST00000495221 NRKQ7Z2Y5 1582 aa31.05■■■□□ 2.56
PDE1C-211ENST00000495221 BRD4O60885 1362 aaPredicted RBP31.05■■■□□ 2.56
PDE1C-211ENST00000495221 SEPT12Q8IYM1 358 aa31.02■■■□□ 2.56
PDE1C-211ENST00000495221 CABP2Q9NPB3 220 aa31.02■■■□□ 2.56
PDE1C-211ENST00000495221 PRDM11Q9NQV5 511 aa31.02■■■□□ 2.56
PDE1C-211ENST00000495221 KIAA0232Q92628 1395 aa31■■■□□ 2.55
PDE1C-211ENST00000495221 EVC2Q86UK5 1308 aa30.99■■■□□ 2.55
PDE1C-211ENST00000495221 AKAP12Q02952 1782 aa30.97■■■□□ 2.55
PDE1C-211ENST00000495221 BLMP54132 1417 aaPredicted RBP30.97■■■□□ 2.55
PDE1C-211ENST00000495221 USP19O94966 1318 aa30.97■■■□□ 2.55
PDE1C-211ENST00000495221 THSD7AQ9UPZ6 1657 aa30.97■■■□□ 2.55
PDE1C-211ENST00000495221 ABTB2Q8N961 1025 aa30.96■■■□□ 2.55
PDE1C-211ENST00000495221 USP6P35125 1406 aa30.96■■■□□ 2.55
PDE1C-211ENST00000495221 SPATA31A5Q5VU36 1347 aa30.95■■■□□ 2.54
PDE1C-211ENST00000495221 SPATA31A7Q8IWB4 1347 aa30.95■■■□□ 2.54
PDE1C-211ENST00000495221 LMO7Q8WWI1 1683 aa30.94■■■□□ 2.54
PDE1C-211ENST00000495221 NUTM2GQ5VZR2 741 aa30.94■■■□□ 2.54
PDE1C-211ENST00000495221 CPDO75976 1380 aa30.92■■■□□ 2.54
PDE1C-211ENST00000495221 SBNO2Q9Y2G9 1366 aa30.92■■■□□ 2.54
PDE1C-211ENST00000495221 KRT27Q7Z3Y8 459 aa30.92■■■□□ 2.54
PDE1C-211ENST00000495221 CABP1Q9NZU7 370 aa30.92■■■□□ 2.54
PDE1C-211ENST00000495221 TONSLQ96HA7 1378 aa30.92■■■□□ 2.54
PDE1C-211ENST00000495221 TRIM26Q12899 539 aaPredicted RBP30.91■■■□□ 2.54
PDE1C-211ENST00000495221 FAM98CQ17RN3 349 aaKnown RBP30.91■■■□□ 2.54
PDE1C-211ENST00000495221 NLRP13Q86W25 1043 aa30.91■■■□□ 2.54
PDE1C-211ENST00000495221 PIK3C2AO00443 1686 aa30.9■■■□□ 2.54
PDE1C-211ENST00000495221 ZC3H6P61129 1189 aaKnown RBP30.89■■■□□ 2.54
PDE1C-211ENST00000495221 SSH2Q76I76 1423 aa30.89■■■□□ 2.53
PDE1C-211ENST00000495221 A0A0G2JS52 829 aa30.88■■■□□ 2.53
PDE1C-211ENST00000495221 MYT1Q01538 1121 aa30.88■■■□□ 2.53
PDE1C-211ENST00000495221 CHRNA2Q15822 529 aa30.88■■■□□ 2.53
PDE1C-211ENST00000495221 SLIT3O75094 1523 aa30.88■■■□□ 2.53
PDE1C-211ENST00000495221 CAMTA1Q9Y6Y1 1673 aa30.86■■■□□ 2.53
PDE1C-211ENST00000495221 MON2Q7Z3U7 1717 aa30.85■■■□□ 2.53
PDE1C-211ENST00000495221 SPATA31A1Q5TZJ5 1347 aa30.85■■■□□ 2.53
PDE1C-211ENST00000495221 RGPD1P0DJD0 1748 aa30.84■■■□□ 2.53
PDE1C-211ENST00000495221 GCP02774 474 aa30.83■■■□□ 2.53
PDE1C-211ENST00000495221 CARD11Q9BXL7 1154 aa30.83■■■□□ 2.53
PDE1C-211ENST00000495221 SF3B2Q13435 895 aaKnown RBP30.82■■■□□ 2.52
PDE1C-211ENST00000495221 ZNF692Q9BU19 519 aaPredicted RBP30.82■■■□□ 2.52
PDE1C-211ENST00000495221 STRN4Q9NRL3 753 aa30.81■■■□□ 2.52
PDE1C-211ENST00000495221 CPSF1Q10570 1443 aaKnown RBP30.8■■■□□ 2.52
PDE1C-211ENST00000495221 NLRP6P59044 892 aa30.79■■■□□ 2.52
PDE1C-211ENST00000495221 ZRANB1Q9UGI0 708 aa30.78■■■□□ 2.52
PDE1C-211ENST00000495221 COL5A2P05997 1499 aaPredicted RBP30.77■■■□□ 2.52
PDE1C-211ENST00000495221 COL18A1P39060 1754 aa30.77■■■□□ 2.52
PDE1C-211ENST00000495221 EVA1CP58658 441 aa30.77■■■□□ 2.52
PDE1C-211ENST00000495221 TTC21AQ8NDW8 1320 aa30.76■■■□□ 2.52
PDE1C-211ENST00000495221 TNS1Q9HBL0 1735 aaKnown RBP30.76■■■□□ 2.51
PDE1C-211ENST00000495221 USP54Q70EL1 1684 aa30.75■■■□□ 2.51
PDE1C-211ENST00000495221 TTC21BQ7Z4L5 1316 aa30.74■■■□□ 2.51
PDE1C-211ENST00000495221 BARGINQ6ZT62 677 aa30.74■■■□□ 2.51
PDE1C-211ENST00000495221 PARP4Q9UKK3 1724 aaKnown RBP30.73■■■□□ 2.51
PDE1C-211ENST00000495221 AATKQ6ZMQ8 1374 aa30.73■■■□□ 2.51
PDE1C-211ENST00000495221 KTN1Q86UP2 1357 aaKnown RBP30.72■■■□□ 2.51
PDE1C-211ENST00000495221 DEFB132Q7Z7B7 95 aa30.72■■■□□ 2.51
PDE1C-211ENST00000495221 LARP1Q6PKG0 1096 aaKnown RBP30.71■■■□□ 2.51
PDE1C-211ENST00000495221 THRAP3Q9Y2W1 955 aaKnown RBP30.7■■■□□ 2.51
PDE1C-211ENST00000495221 RGPD5Q99666 1765 aa30.69■■■□□ 2.5
PDE1C-211ENST00000495221 WNK3Q9BYP7 1800 aa30.69■■■□□ 2.5
PDE1C-211ENST00000495221 CRB1P82279 1406 aa30.68■■■□□ 2.5
PDE1C-211ENST00000495221 BAG6P46379 1132 aa30.68■■■□□ 2.5
PDE1C-211ENST00000495221 TCP11L2Q8N4U5 519 aa30.68■■■□□ 2.5
PDE1C-211ENST00000495221 USP35Q9P2H5 1018 aa30.68■■■□□ 2.5
PDE1C-211ENST00000495221 CD163L1Q9NR16 1453 aa30.68■■■□□ 2.5
PDE1C-211ENST00000495221 KCNH5Q8NCM2 988 aa30.67■■■□□ 2.5
PDE1C-211ENST00000495221 NFAT5O94916 1531 aa30.67■■■□□ 2.5
PDE1C-211ENST00000495221 ABCC6O95255 1503 aa30.67■■■□□ 2.5
PDE1C-211ENST00000495221 DISP2A7MBM2 1401 aa30.66■■■□□ 2.5
PDE1C-211ENST00000495221 PUS7Q96PZ0 661 aaKnown RBP30.66■■■□□ 2.5
PDE1C-211ENST00000495221 SRCAPQ6ZRS2 3230 aa30.64■■■□□ 2.5
PDE1C-211ENST00000495221 FAM182BQ5T319 152 aa30.64■■■□□ 2.5
PDE1C-211ENST00000495221 FAM196AQ6ZSG2 479 aa30.63■■■□□ 2.49
PDE1C-211ENST00000495221 ZBTB7CA1YPR0 619 aa30.61■■■□□ 2.49
PDE1C-211ENST00000495221 ARHGEF25Q86VW2 580 aa30.61■■■□□ 2.49
PDE1C-211ENST00000495221 USP31Q70CQ4 1352 aa30.61■■■□□ 2.49
PDE1C-211ENST00000495221 LRRC37A3O60309 1634 aa30.6■■■□□ 2.49
PDE1C-211ENST00000495221 SLC24A1O60721 1099 aa30.6■■■□□ 2.49
PDE1C-211ENST00000495221 LTN1O94822 1766 aa30.6■■■□□ 2.49
PDE1C-211ENST00000495221 EDC4Q6P2E9 1401 aaKnown RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms