RNA–Protein interactions for RNA: ENST00000495198.6

SREK1IP1-201, Transcript of SREK1 interacting protein 1, humanhuman

TSL 3

Gene SREK1IP1, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-201ENST00000495198 MRPL14Q6P1L8 145 aaKnown RBP12.92□□□□□ -0.34
SREK1IP1-201ENST00000495198 MPNDQ8N594 471 aa12.92□□□□□ -0.34
SREK1IP1-201ENST00000495198 KRTAP4-6Q9BYQ5 205 aa12.92□□□□□ -0.34
SREK1IP1-201ENST00000495198 PURBQ96QR8 312 aaKnown RBP12.91□□□□□ -0.34
SREK1IP1-201ENST00000495198 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
SREK1IP1-201ENST00000495198 VARSP26640 1264 aaKnown RBP12.89□□□□□ -0.35
SREK1IP1-201ENST00000495198 VSIG8P0DPA2 414 aa12.88□□□□□ -0.35
SREK1IP1-201ENST00000495198 WDR4P57081 412 aaKnown RBP12.88□□□□□ -0.35
SREK1IP1-201ENST00000495198 DESI1Q6ICB0 168 aa12.87□□□□□ -0.35
SREK1IP1-201ENST00000495198 FAM181BA6NEQ2 426 aa12.86□□□□□ -0.35
SREK1IP1-201ENST00000495198 ADH1CP00326 375 aa12.86□□□□□ -0.35
SREK1IP1-201ENST00000495198 FOXJ1Q92949 421 aa12.86□□□□□ -0.35
SREK1IP1-201ENST00000495198 CFAP99D6REC4 459 aa12.85□□□□□ -0.35
SREK1IP1-201ENST00000495198 MTMR2Q13614 643 aa12.85□□□□□ -0.35
SREK1IP1-201ENST00000495198 C4orf48Q5BLP8 95 aa12.85□□□□□ -0.35
SREK1IP1-201ENST00000495198 ZFAND3Q9H8U3 227 aa12.85□□□□□ -0.35
SREK1IP1-201ENST00000495198 NR3C2P08235 984 aa12.84□□□□□ -0.35
SREK1IP1-201ENST00000495198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.84□□□□□ -0.35
SREK1IP1-201ENST00000495198 MAP10Q9P2G4 905 aa12.83□□□□□ -0.36
SREK1IP1-201ENST00000495198 PCDHB15Q9Y5E8 787 aa12.83□□□□□ -0.36
SREK1IP1-201ENST00000495198 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
SREK1IP1-201ENST00000495198 F12P00748 615 aaPredicted RBP12.82□□□□□ -0.36
SREK1IP1-201ENST00000495198 GSK3AP49840 483 aa12.82□□□□□ -0.36
SREK1IP1-201ENST00000495198 LYPD8Q6UX82 237 aa12.82□□□□□ -0.36
SREK1IP1-201ENST00000495198 KRI1Q8N9T8 703 aaKnown RBP12.82□□□□□ -0.36
SREK1IP1-201ENST00000495198 CDK15Q96Q40 435 aa12.82□□□□□ -0.36
SREK1IP1-201ENST00000495198 AMHR2Q16671 573 aa12.81□□□□□ -0.36
SREK1IP1-201ENST00000495198 ITPKCQ96DU7 683 aa12.81□□□□□ -0.36
SREK1IP1-201ENST00000495198 GIGYF2Q6Y7W6 1299 aaKnown RBP12.8□□□□□ -0.36
SREK1IP1-201ENST00000495198 RSBN1LQ6PCB5 846 aaPredicted RBP12.79□□□□□ -0.36
SREK1IP1-201ENST00000495198 TULP1O00294 542 aaPredicted RBP12.78□□□□□ -0.36
SREK1IP1-201ENST00000495198 GRM5P41594 1212 aa12.78□□□□□ -0.36
SREK1IP1-201ENST00000495198 SCARF1Q14162 830 aa12.78□□□□□ -0.36
SREK1IP1-201ENST00000495198 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
SREK1IP1-201ENST00000495198 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
SREK1IP1-201ENST00000495198 SPDYE5A6NIY4 337 aa12.77□□□□□ -0.37
SREK1IP1-201ENST00000495198 ZIC2O95409 532 aaPredicted RBP12.77□□□□□ -0.37
SREK1IP1-201ENST00000495198 CTHP32929 405 aa12.77□□□□□ -0.37
SREK1IP1-201ENST00000495198 TTLL12Q14166 644 aaPredicted RBP12.77□□□□□ -0.37
SREK1IP1-201ENST00000495198 FAM174AQ8TBP5 190 aa12.77□□□□□ -0.37
SREK1IP1-201ENST00000495198 BARGINQ6ZT62 677 aa12.76□□□□□ -0.37
SREK1IP1-201ENST00000495198 C6orf118Q5T5N4 469 aa12.75□□□□□ -0.37
SREK1IP1-201ENST00000495198 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
SREK1IP1-201ENST00000495198 HRCP23327 699 aa12.74□□□□□ -0.37
SREK1IP1-201ENST00000495198 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
SREK1IP1-201ENST00000495198 ZMYND10O75800 440 aa12.73□□□□□ -0.37
SREK1IP1-201ENST00000495198 GJA5P36382 358 aa12.73□□□□□ -0.37
SREK1IP1-201ENST00000495198 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
SREK1IP1-201ENST00000495198 SPTLC1O15269 473 aa12.72□□□□□ -0.37
SREK1IP1-201ENST00000495198 KRT76Q01546 638 aa12.72□□□□□ -0.37
SREK1IP1-201ENST00000495198 ARID5BQ14865 1188 aa12.72□□□□□ -0.37
SREK1IP1-201ENST00000495198 PARP9Q8IXQ6 854 aa12.71□□□□□ -0.37
SREK1IP1-201ENST00000495198 MEIOBQ8N635 442 aa12.71□□□□□ -0.37
SREK1IP1-201ENST00000495198 DNMT3LQ9UJW3 386 aa12.71□□□□□ -0.37
SREK1IP1-201ENST00000495198 C1QTNF2Q9BXJ5 285 aa12.69□□□□□ -0.38
SREK1IP1-201ENST00000495198 SOS2Q07890 1332 aaPredicted RBP12.68□□□□□ -0.38
SREK1IP1-201ENST00000495198 MAN1A2O60476 641 aa12.68□□□□□ -0.38
SREK1IP1-201ENST00000495198 NR5A1Q13285 461 aa12.68□□□□□ -0.38
SREK1IP1-201ENST00000495198 LINC00528Q8N1L1 170 aa12.68□□□□□ -0.38
SREK1IP1-201ENST00000495198 GPR161Q8N6U8 529 aaKnown RBP12.68□□□□□ -0.38
SREK1IP1-201ENST00000495198 RB1CC1Q8TDY2 1594 aa12.66□□□□□ -0.38
SREK1IP1-201ENST00000495198 SH3RF1Q7Z6J0 888 aa12.66□□□□□ -0.38
SREK1IP1-201ENST00000495198 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
SREK1IP1-201ENST00000495198 SUZ12Q15022 739 aaKnown RBP12.65□□□□□ -0.38
SREK1IP1-201ENST00000495198 ZC3H15Q8WU90 426 aaKnown RBP12.65□□□□□ -0.38
SREK1IP1-201ENST00000495198 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
SREK1IP1-201ENST00000495198 BMP2P12643 396 aa12.64□□□□□ -0.39
SREK1IP1-201ENST00000495198 QPCTQ16769 361 aa12.63□□□□□ -0.39
SREK1IP1-201ENST00000495198 LIMD1Q9UGP4 676 aa12.63□□□□□ -0.39
SREK1IP1-201ENST00000495198 FSHRP23945 695 aa12.62□□□□□ -0.39
SREK1IP1-201ENST00000495198 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
SREK1IP1-201ENST00000495198 KCTD17Q8N5Z5 321 aa12.62□□□□□ -0.39
SREK1IP1-201ENST00000495198 BCANQ96GW7 911 aa12.62□□□□□ -0.39
SREK1IP1-201ENST00000495198 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
SREK1IP1-201ENST00000495198 PRPF38BQ5VTL8 546 aaKnown RBP12.61□□□□□ -0.39
SREK1IP1-201ENST00000495198 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
SREK1IP1-201ENST00000495198 BPHLQ86WA6 291 aaPredicted RBP12.6□□□□□ -0.39
SREK1IP1-201ENST00000495198 TRIM66O15016 1216 aa12.59□□□□□ -0.39
SREK1IP1-201ENST00000495198 AGERQ15109 404 aa12.59□□□□□ -0.39
SREK1IP1-201ENST00000495198 MAP4K5Q9Y4K4 846 aa12.58□□□□□ -0.4
SREK1IP1-201ENST00000495198 TRMT44Q8IYL2 757 aaKnown RBP12.57□□□□□ -0.4
SREK1IP1-201ENST00000495198 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
SREK1IP1-201ENST00000495198 RNFT1Q5M7Z0 435 aa12.55□□□□□ -0.4
SREK1IP1-201ENST00000495198 MYSM1Q5VVJ2 828 aa12.55□□□□□ -0.4
SREK1IP1-201ENST00000495198 CNTNAP3BQ96NU0 1288 aa12.55□□□□□ -0.4
SREK1IP1-201ENST00000495198 CNTNAP3Q9BZ76 1288 aa12.55□□□□□ -0.4
SREK1IP1-201ENST00000495198 LILRB3O75022 631 aa12.54□□□□□ -0.4
SREK1IP1-201ENST00000495198 PTSQ03393 145 aa12.54□□□□□ -0.4
SREK1IP1-201ENST00000495198 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
SREK1IP1-201ENST00000495198 CBLBQ13191 982 aa12.52□□□□□ -0.41
SREK1IP1-201ENST00000495198 VASH1Q7L8A9 365 aaPredicted RBP12.52□□□□□ -0.41
SREK1IP1-201ENST00000495198 TTLL8A6PVC2 850 aa12.51□□□□□ -0.41
SREK1IP1-201ENST00000495198 UPP2O95045 317 aa12.51□□□□□ -0.41
SREK1IP1-201ENST00000495198 RASSF7Q02833 373 aa12.51□□□□□ -0.41
SREK1IP1-201ENST00000495198 ZNF385CQ66K41 422 aaPredicted RBP12.51□□□□□ -0.41
SREK1IP1-201ENST00000495198 CCDC116Q8IYX3 515 aa12.51□□□□□ -0.41
SREK1IP1-201ENST00000495198 TSC1Q92574 1164 aa12.51□□□□□ -0.41
SREK1IP1-201ENST00000495198 TSEN34Q9BSV6 310 aaKnown RBP12.51□□□□□ -0.41
SREK1IP1-201ENST00000495198 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
SREK1IP1-201ENST00000495198 WHAMMQ8TF30 809 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms