RNA–Protein interactions for RNA: ENST00000495176.5

CYTH3-211, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-211ENST00000495176 PLEKHG3A1L390 1219 aa25.77■■□□□ 1.72
CYTH3-211ENST00000495176 CCDC9Q9Y3X0 531 aaKnown RBP25.77■■□□□ 1.72
CYTH3-211ENST00000495176 RGS12O14924 1447 aa25.77■■□□□ 1.72
CYTH3-211ENST00000495176 ATRNO75882 1429 aa25.77■■□□□ 1.72
CYTH3-211ENST00000495176 FAM83GA6ND36 823 aa25.76■■□□□ 1.71
CYTH3-211ENST00000495176 CABP1Q9NZU7 370 aa25.76■■□□□ 1.71
CYTH3-211ENST00000495176 EVC2Q86UK5 1308 aa25.76■■□□□ 1.71
CYTH3-211ENST00000495176 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.76■■□□□ 1.71
CYTH3-211ENST00000495176 PPIP5K1Q6PFW1 1433 aa25.75■■□□□ 1.71
CYTH3-211ENST00000495176 GJD4Q96KN9 370 aaPredicted RBP25.75■■□□□ 1.71
CYTH3-211ENST00000495176 UPF1Q92900 1129 aaKnown RBP eCLIP25.73■■□□□ 1.71
CYTH3-211ENST00000495176 ABTB2Q8N961 1025 aa25.72■■□□□ 1.71
CYTH3-211ENST00000495176 SLIT2O94813 1529 aa25.72■■□□□ 1.71
CYTH3-211ENST00000495176 NWD2Q9ULI1 1742 aa25.71■■□□□ 1.71
CYTH3-211ENST00000495176 POLR3AO14802 1390 aaPredicted RBP25.71■■□□□ 1.71
CYTH3-211ENST00000495176 PLCH1Q4KWH8 1693 aa25.71■■□□□ 1.71
CYTH3-211ENST00000495176 BTG4Q9NY30 223 aa25.69■■□□□ 1.7
CYTH3-211ENST00000495176 ZC3H6P61129 1189 aaKnown RBP25.68■■□□□ 1.7
CYTH3-211ENST00000495176 PRDM11Q9NQV5 511 aa25.68■■□□□ 1.7
CYTH3-211ENST00000495176 CHRNA2Q15822 529 aa25.65■■□□□ 1.7
CYTH3-211ENST00000495176 VPS72Q15906 364 aa25.65■■□□□ 1.7
CYTH3-211ENST00000495176 CRYBG1Q9Y4K1 1723 aa25.65■■□□□ 1.7
CYTH3-211ENST00000495176 COL14A1Q05707 1796 aaKnown RBP25.64■■□□□ 1.7
CYTH3-211ENST00000495176 RALGAPBQ86X10 1494 aa25.64■■□□□ 1.69
CYTH3-211ENST00000495176 A0A0G2JS52 829 aa25.63■■□□□ 1.69
CYTH3-211ENST00000495176 MYT1Q01538 1121 aa25.63■■□□□ 1.69
CYTH3-211ENST00000495176 KIAA0232Q92628 1395 aa25.62■■□□□ 1.69
CYTH3-211ENST00000495176 ZBTB7CA1YPR0 619 aa25.61■■□□□ 1.69
CYTH3-211ENST00000495176 NLRP13Q86W25 1043 aa25.61■■□□□ 1.69
CYTH3-211ENST00000495176 BRD4O60885 1362 aaPredicted RBP25.6■■□□□ 1.69
CYTH3-211ENST00000495176 ATAD2Q6PL18 1390 aa25.6■■□□□ 1.69
CYTH3-211ENST00000495176 PHRF1Q9P1Y6 1649 aaKnown RBP25.6■■□□□ 1.69
CYTH3-211ENST00000495176 NLRP6P59044 892 aa25.59■■□□□ 1.69
CYTH3-211ENST00000495176 SEPT12Q8IYM1 358 aa25.59■■□□□ 1.69
CYTH3-211ENST00000495176 TMC1Q8TDI8 760 aa25.59■■□□□ 1.69
CYTH3-211ENST00000495176 STRN4Q9NRL3 753 aa25.59■■□□□ 1.69
CYTH3-211ENST00000495176 GLI3P10071 1580 aa25.59■■□□□ 1.69
CYTH3-211ENST00000495176 USP6P35125 1406 aa25.56■■□□□ 1.68
CYTH3-211ENST00000495176 FAM98CQ17RN3 349 aaKnown RBP25.56■■□□□ 1.68
CYTH3-211ENST00000495176 ZNF692Q9BU19 519 aaPredicted RBP25.56■■□□□ 1.68
CYTH3-211ENST00000495176 NRAPQ86VF7 1730 aa25.56■■□□□ 1.68
CYTH3-211ENST00000495176 BRWD3Q6RI45 1802 aa25.56■■□□□ 1.68
CYTH3-211ENST00000495176 ST20-MTHFSA0A0A6YYL1 179 aa25.55■■□□□ 1.68
CYTH3-211ENST00000495176 GCP02774 474 aa25.55■■□□□ 1.68
CYTH3-211ENST00000495176 EVA1CP58658 441 aa25.55■■□□□ 1.68
CYTH3-211ENST00000495176 SBNO2Q9Y2G9 1366 aa25.55■■□□□ 1.68
CYTH3-211ENST00000495176 AKAP12Q02952 1782 aa25.54■■□□□ 1.68
CYTH3-211ENST00000495176 SOX12O15370 315 aa25.52■■□□□ 1.68
CYTH3-211ENST00000495176 CCER1Q8TC90 406 aaPredicted RBP25.52■■□□□ 1.68
CYTH3-211ENST00000495176 USP35Q9P2H5 1018 aa25.52■■□□□ 1.68
CYTH3-211ENST00000495176 TTC21BQ7Z4L5 1316 aa25.52■■□□□ 1.68
CYTH3-211ENST00000495176 USP19O94966 1318 aa25.51■■□□□ 1.67
CYTH3-211ENST00000495176 KTN1Q86UP2 1357 aaKnown RBP25.51■■□□□ 1.67
CYTH3-211ENST00000495176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.5■■□□□ 1.67
CYTH3-211ENST00000495176 SLC12A5Q9H2X9 1139 aa25.5■■□□□ 1.67
CYTH3-211ENST00000495176 SPATA31A5Q5VU36 1347 aa25.49■■□□□ 1.67
CYTH3-211ENST00000495176 SPATA31A7Q8IWB4 1347 aa25.49■■□□□ 1.67
CYTH3-211ENST00000495176 ONECUT3O60422 494 aaPredicted RBP25.49■■□□□ 1.67
CYTH3-211ENST00000495176 NRKQ7Z2Y5 1582 aa25.48■■□□□ 1.67
CYTH3-211ENST00000495176 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
CYTH3-211ENST00000495176 SLC24A1O60721 1099 aa25.47■■□□□ 1.67
CYTH3-211ENST00000495176 KRT27Q7Z3Y8 459 aa25.47■■□□□ 1.67
CYTH3-211ENST00000495176 SSH2Q76I76 1423 aa25.46■■□□□ 1.67
CYTH3-211ENST00000495176 HDGFL2Q7Z4V5 671 aaPredicted RBP25.46■■□□□ 1.67
CYTH3-211ENST00000495176 TIMELESSQ9UNS1 1208 aa25.46■■□□□ 1.67
CYTH3-211ENST00000495176 EP400Q96L91 3159 aa25.46■■□□□ 1.67
CYTH3-211ENST00000495176 LARP1Q6PKG0 1096 aaKnown RBP25.45■■□□□ 1.66
CYTH3-211ENST00000495176 CCDC125Q86Z20 511 aa25.45■■□□□ 1.66
CYTH3-211ENST00000495176 TESK2Q96S53 571 aa25.45■■□□□ 1.66
CYTH3-211ENST00000495176 CPDO75976 1380 aa25.44■■□□□ 1.66
CYTH3-211ENST00000495176 ZRANB1Q9UGI0 708 aa25.44■■□□□ 1.66
CYTH3-211ENST00000495176 PIK3C2AO00443 1686 aa25.44■■□□□ 1.66
CYTH3-211ENST00000495176 CPSF1Q10570 1443 aaKnown RBP25.44■■□□□ 1.66
CYTH3-211ENST00000495176 TTC21AQ8NDW8 1320 aa25.43■■□□□ 1.66
CYTH3-211ENST00000495176 USP47Q96K76 1375 aa25.43■■□□□ 1.66
CYTH3-211ENST00000495176 SPATA31A1Q5TZJ5 1347 aa25.42■■□□□ 1.66
CYTH3-211ENST00000495176 FAM182BQ5T319 152 aa25.42■■□□□ 1.66
CYTH3-211ENST00000495176 PUS7Q96PZ0 661 aaKnown RBP25.42■■□□□ 1.66
CYTH3-211ENST00000495176 MON2Q7Z3U7 1717 aa25.42■■□□□ 1.66
CYTH3-211ENST00000495176 TERF2IPQ9NYB0 399 aa25.41■■□□□ 1.66
CYTH3-211ENST00000495176 NME9Q86XW9 330 aa25.4■■□□□ 1.66
CYTH3-211ENST00000495176 CAMTA1Q9Y6Y1 1673 aa25.39■■□□□ 1.66
CYTH3-211ENST00000495176 KCNH5Q8NCM2 988 aa25.39■■□□□ 1.66
CYTH3-211ENST00000495176 SLIT3O75094 1523 aa25.38■■□□□ 1.65
CYTH3-211ENST00000495176 TMF1P82094 1093 aa25.38■■□□□ 1.65
CYTH3-211ENST00000495176 SF3B2Q13435 895 aaKnown RBP25.38■■□□□ 1.65
CYTH3-211ENST00000495176 LMO7Q8WWI1 1683 aa25.37■■□□□ 1.65
CYTH3-211ENST00000495176 CD163L1Q9NR16 1453 aa25.36■■□□□ 1.65
CYTH3-211ENST00000495176 TCP11L2Q8N4U5 519 aa25.35■■□□□ 1.65
CYTH3-211ENST00000495176 AXIN2Q9Y2T1 843 aa25.35■■□□□ 1.65
CYTH3-211ENST00000495176 A0A1W2PP64 1363 aa25.34■■□□□ 1.65
CYTH3-211ENST00000495176 TOM1L2Q6ZVM7 507 aa25.34■■□□□ 1.65
CYTH3-211ENST00000495176 AATKQ6ZMQ8 1374 aa25.33■■□□□ 1.65
CYTH3-211ENST00000495176 BLMP54132 1417 aaPredicted RBP25.33■■□□□ 1.65
CYTH3-211ENST00000495176 DEFB132Q7Z7B7 95 aa25.33■■□□□ 1.65
CYTH3-211ENST00000495176 ARHGEF25Q86VW2 580 aa25.33■■□□□ 1.65
CYTH3-211ENST00000495176 CSB-PGBD3P0DP91 1061 aa25.32■■□□□ 1.64
CYTH3-211ENST00000495176 THSD7AQ9UPZ6 1657 aa25.32■■□□□ 1.64
CYTH3-211ENST00000495176 NINLQ9Y2I6 1382 aa25.31■■□□□ 1.64
CYTH3-211ENST00000495176 RGPD5Q99666 1765 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms