RNA–Protein interactions for RNA: ENST00000494975.1

PRUNE2-215, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-215ENST00000494975 CDK19Q9BWU1 502 aa10.66□□□□□ -0.7
PRUNE2-215ENST00000494975 ATP7BP35670 1465 aa10.66□□□□□ -0.7
PRUNE2-215ENST00000494975 ARHGEF10O15013 1369 aa10.65□□□□□ -0.7
PRUNE2-215ENST00000494975 ITSN1Q15811 1721 aa10.65□□□□□ -0.7
PRUNE2-215ENST00000494975 SRPK2P78362 688 aaKnown RBP10.65□□□□□ -0.7
PRUNE2-215ENST00000494975 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.7
PRUNE2-215ENST00000494975 QRICH2Q9H0J4 1663 aa10.65□□□□□ -0.7
PRUNE2-215ENST00000494975 SBNO1A3KN83 1393 aa10.65□□□□□ -0.71
PRUNE2-215ENST00000494975 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
PRUNE2-215ENST00000494975 RXRBP28702 533 aa10.64□□□□□ -0.71
PRUNE2-215ENST00000494975 CABLES1Q8TDN4 633 aa10.63□□□□□ -0.71
PRUNE2-215ENST00000494975 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
PRUNE2-215ENST00000494975 USP21Q9UK80 565 aa10.63□□□□□ -0.71
PRUNE2-215ENST00000494975 NBPF8Q3BBV2 869 aa10.62□□□□□ -0.71
PRUNE2-215ENST00000494975 QTRT2Q9H974 415 aaKnown RBP10.62□□□□□ -0.71
PRUNE2-215ENST00000494975 TRPM3Q9HCF6 1732 aaPredicted RBP10.61□□□□□ -0.71
PRUNE2-215ENST00000494975 TOPAZ1Q8N9V7 1692 aa10.61□□□□□ -0.71
PRUNE2-215ENST00000494975 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
PRUNE2-215ENST00000494975 CARD11Q9BXL7 1154 aa10.61□□□□□ -0.71
PRUNE2-215ENST00000494975 CABP2Q9NPB3 220 aa10.61□□□□□ -0.71
PRUNE2-215ENST00000494975 CCDC61Q9Y6R9 512 aa10.61□□□□□ -0.71
PRUNE2-215ENST00000494975 MARF1Q9Y4F3 1742 aaKnown RBP10.61□□□□□ -0.71
PRUNE2-215ENST00000494975 RALGAPBQ86X10 1494 aa10.61□□□□□ -0.71
PRUNE2-215ENST00000494975 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
PRUNE2-215ENST00000494975 PPIP5K1Q6PFW1 1433 aa10.6□□□□□ -0.71
PRUNE2-215ENST00000494975 RBM6P78332 1123 aaKnown RBP10.6□□□□□ -0.71
PRUNE2-215ENST00000494975 FNBP4Q8N3X1 1017 aaPredicted RBP10.6□□□□□ -0.71
PRUNE2-215ENST00000494975 TRPC5Q9UL62 973 aaPredicted RBP10.6□□□□□ -0.71
PRUNE2-215ENST00000494975 ACEP12821 1306 aa10.59□□□□□ -0.71
PRUNE2-215ENST00000494975 ABCA3Q99758 1704 aa10.59□□□□□ -0.71
PRUNE2-215ENST00000494975 ALS2Q96Q42 1657 aa10.59□□□□□ -0.71
PRUNE2-215ENST00000494975 CDK12Q9NYV4 1490 aaPredicted RBP10.58□□□□□ -0.72
PRUNE2-215ENST00000494975 POLR3AO14802 1390 aaPredicted RBP10.58□□□□□ -0.72
PRUNE2-215ENST00000494975 EP400Q96L91 3159 aa10.58□□□□□ -0.72
PRUNE2-215ENST00000494975 RGS12O14924 1447 aa10.58□□□□□ -0.72
PRUNE2-215ENST00000494975 ATRNO75882 1429 aa10.58□□□□□ -0.72
PRUNE2-215ENST00000494975 BCL9LQ86UU0 1499 aa10.57□□□□□ -0.72
PRUNE2-215ENST00000494975 PLEKHG3A1L390 1219 aa10.57□□□□□ -0.72
PRUNE2-215ENST00000494975 NUTM2GQ5VZR2 741 aa10.57□□□□□ -0.72
PRUNE2-215ENST00000494975 UNC5CLQ8IV45 518 aa10.56□□□□□ -0.72
PRUNE2-215ENST00000494975 CABP1Q9NZU7 370 aa10.56□□□□□ -0.72
PRUNE2-215ENST00000494975 CCDC9Q9Y3X0 531 aaKnown RBP10.56□□□□□ -0.72
PRUNE2-215ENST00000494975 SLIT2O94813 1529 aa10.56□□□□□ -0.72
PRUNE2-215ENST00000494975 PLCH1Q4KWH8 1693 aa10.56□□□□□ -0.72
PRUNE2-215ENST00000494975 ABTB2Q8N961 1025 aa10.55□□□□□ -0.72
PRUNE2-215ENST00000494975 PRDM11Q9NQV5 511 aa10.55□□□□□ -0.72
PRUNE2-215ENST00000494975 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.55□□□□□ -0.72
PRUNE2-215ENST00000494975 ATAD2Q6PL18 1390 aa10.54□□□□□ -0.72
PRUNE2-215ENST00000494975 SBNO2Q9Y2G9 1366 aa10.54□□□□□ -0.72
PRUNE2-215ENST00000494975 FAM83GA6ND36 823 aa10.54□□□□□ -0.72
PRUNE2-215ENST00000494975 CCER1Q8TC90 406 aaPredicted RBP10.54□□□□□ -0.72
PRUNE2-215ENST00000494975 GJD4Q96KN9 370 aaPredicted RBP10.54□□□□□ -0.72
PRUNE2-215ENST00000494975 NWD2Q9ULI1 1742 aa10.53□□□□□ -0.72
PRUNE2-215ENST00000494975 USP6P35125 1406 aa10.53□□□□□ -0.72
PRUNE2-215ENST00000494975 CLSPNQ9HAW4 1339 aa10.53□□□□□ -0.72
PRUNE2-215ENST00000494975 CRYBG1Q9Y4K1 1723 aa10.53□□□□□ -0.72
PRUNE2-215ENST00000494975 KIAA0232Q92628 1395 aa10.52□□□□□ -0.72
PRUNE2-215ENST00000494975 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.72
PRUNE2-215ENST00000494975 PHRF1Q9P1Y6 1649 aaKnown RBP10.52□□□□□ -0.73
PRUNE2-215ENST00000494975 A0A0G2JS52 829 aa10.52□□□□□ -0.73
PRUNE2-215ENST00000494975 ZC3H6P61129 1189 aaKnown RBP10.52□□□□□ -0.73
PRUNE2-215ENST00000494975 MYT1Q01538 1121 aa10.52□□□□□ -0.73
PRUNE2-215ENST00000494975 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
PRUNE2-215ENST00000494975 TMC1Q8TDI8 760 aa10.52□□□□□ -0.73
PRUNE2-215ENST00000494975 BTG4Q9NY30 223 aa10.52□□□□□ -0.73
PRUNE2-215ENST00000494975 CHRNA2Q15822 529 aa10.51□□□□□ -0.73
PRUNE2-215ENST00000494975 VPS72Q15906 364 aa10.51□□□□□ -0.73
PRUNE2-215ENST00000494975 NLRP13Q86W25 1043 aa10.51□□□□□ -0.73
PRUNE2-215ENST00000494975 GLI3P10071 1580 aa10.51□□□□□ -0.73
PRUNE2-215ENST00000494975 BRD4O60885 1362 aaPredicted RBP10.51□□□□□ -0.73
PRUNE2-215ENST00000494975 USP47Q96K76 1375 aa10.51□□□□□ -0.73
PRUNE2-215ENST00000494975 ST20-MTHFSA0A0A6YYL1 179 aa10.5□□□□□ -0.73
PRUNE2-215ENST00000494975 ZBTB7CA1YPR0 619 aa10.5□□□□□ -0.73
PRUNE2-215ENST00000494975 NLRP6P59044 892 aa10.5□□□□□ -0.73
PRUNE2-215ENST00000494975 NRKQ7Z2Y5 1582 aa10.5□□□□□ -0.73
PRUNE2-215ENST00000494975 KTN1Q86UP2 1357 aaKnown RBP10.5□□□□□ -0.73
PRUNE2-215ENST00000494975 UPF1Q92900 1129 aaKnown RBP eCLIP10.49□□□□□ -0.73
PRUNE2-215ENST00000494975 STRN4Q9NRL3 753 aa10.49□□□□□ -0.73
PRUNE2-215ENST00000494975 USP19O94966 1318 aa10.49□□□□□ -0.73
PRUNE2-215ENST00000494975 NRAPQ86VF7 1730 aa10.49□□□□□ -0.73
PRUNE2-215ENST00000494975 AKAP12Q02952 1782 aa10.48□□□□□ -0.73
PRUNE2-215ENST00000494975 SOX12O15370 315 aa10.48□□□□□ -0.73
PRUNE2-215ENST00000494975 GCP02774 474 aa10.48□□□□□ -0.73
PRUNE2-215ENST00000494975 ZNF692Q9BU19 519 aaPredicted RBP10.48□□□□□ -0.73
PRUNE2-215ENST00000494975 TIMELESSQ9UNS1 1208 aa10.48□□□□□ -0.73
PRUNE2-215ENST00000494975 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 EVA1CP58658 441 aa10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 FAM98CQ17RN3 349 aaKnown RBP10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 HDGFL2Q7Z4V5 671 aaPredicted RBP10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 SEPT12Q8IYM1 358 aa10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 TESK2Q96S53 571 aa10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 TTC21BQ7Z4L5 1316 aa10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 CPDO75976 1380 aa10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 CPSF1Q10570 1443 aaKnown RBP10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 SSH2Q76I76 1423 aa10.47□□□□□ -0.73
PRUNE2-215ENST00000494975 SLC24A1O60721 1099 aa10.46□□□□□ -0.73
PRUNE2-215ENST00000494975 SLC12A5Q9H2X9 1139 aa10.46□□□□□ -0.73
PRUNE2-215ENST00000494975 TERF2IPQ9NYB0 399 aa10.46□□□□□ -0.73
PRUNE2-215ENST00000494975 TTC21AQ8NDW8 1320 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms