RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SBNO1	A3KN83	1393 aa		18.45	■□□□□ 0.54
APTX-231	ENST00000494973	TTC21B	Q7Z4L5	1316 aa		18.45	■□□□□ 0.54
APTX-231	ENST00000494973	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.45	■□□□□ 0.54
APTX-231	ENST00000494973	UBAP1L	F5GYI3	381 aa		18.44	■□□□□ 0.54
APTX-231	ENST00000494973	FOXO3	O43524	673 aa		18.44	■□□□□ 0.54
APTX-231	ENST00000494973	RALBP1	Q15311	655 aa		18.44	■□□□□ 0.54
APTX-231	ENST00000494973	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.44	■□□□□ 0.54
APTX-231	ENST00000494973	TRPM3	Q9HCF6	1732 aa	Predicted RBP	18.43	■□□□□ 0.54
APTX-231	ENST00000494973	USP54	Q70EL1	1684 aa		18.42	■□□□□ 0.54
APTX-231	ENST00000494973	PXDN	Q92626	1479 aa		18.42	■□□□□ 0.54
APTX-231	ENST00000494973	KRT28	Q7Z3Y7	464 aa		18.42	■□□□□ 0.54
APTX-231	ENST00000494973	ARHGEF10	O15013	1369 aa		18.42	■□□□□ 0.54
APTX-231	ENST00000494973	USP31	Q70CQ4	1352 aa		18.41	■□□□□ 0.54
APTX-231	ENST00000494973	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.4	■□□□□ 0.54	2e-6	■■■□□ 17.9
APTX-231	ENST00000494973	SOS2	Q07890	1332 aa	Predicted RBP	18.4	■□□□□ 0.54
APTX-231	ENST00000494973	PARD3	Q8TEW0	1356 aa		18.4	■□□□□ 0.54
APTX-231	ENST00000494973	TNS3	Q68CZ2	1445 aa		18.4	■□□□□ 0.54
APTX-231	ENST00000494973	PAK3	O75914	559 aa	Predicted RBP	18.39	■□□□□ 0.53
APTX-231	ENST00000494973	COG3	Q96JB2	828 aa		18.39	■□□□□ 0.53
APTX-231	ENST00000494973	PIK3C2A	O00443	1686 aa		18.38	■□□□□ 0.53
APTX-231	ENST00000494973	FYB1	O15117	783 aa		18.38	■□□□□ 0.53
APTX-231	ENST00000494973	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.38	■□□□□ 0.53
APTX-231	ENST00000494973	SCAF1	Q9H7N4	1312 aa	Known RBP	18.38	■□□□□ 0.53
APTX-231	ENST00000494973	ALS2	Q96Q42	1657 aa		18.38	■□□□□ 0.53
APTX-231	ENST00000494973	CC2D1B	Q5T0F9	858 aa	Known RBP	18.37	■□□□□ 0.53
APTX-231	ENST00000494973	MORC1	Q86VD1	984 aa		18.37	■□□□□ 0.53
APTX-231	ENST00000494973	ABTB2	Q8N961	1025 aa		18.37	■□□□□ 0.53
APTX-231	ENST00000494973	OVOS2	A0A0J9YW53	1432 aa		18.37	■□□□□ 0.53
APTX-231	ENST00000494973	OVOS2	Q6IE36	1432 aa		18.37	■□□□□ 0.53
APTX-231	ENST00000494973	NLRP13	Q86W25	1043 aa		18.36	■□□□□ 0.53
APTX-231	ENST00000494973	SPATA31A3	Q5VYP0	1347 aa		18.35	■□□□□ 0.53
APTX-231	ENST00000494973	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.35	■□□□□ 0.53
APTX-231	ENST00000494973	NME9	Q86XW9	330 aa		18.35	■□□□□ 0.53
APTX-231	ENST00000494973	GGNBP2	Q9H3C7	697 aa		18.35	■□□□□ 0.53
APTX-231	ENST00000494973	PHLPP1	O60346	1717 aa		18.35	■□□□□ 0.53
APTX-231	ENST00000494973	MED1	Q15648	1581 aa	Predicted RBP	18.34	■□□□□ 0.53
APTX-231	ENST00000494973	PIP4K2B	P78356	416 aa		18.34	■□□□□ 0.53
APTX-231	ENST00000494973	LRRC59	Q96AG4	307 aa	Known RBP	18.34	■□□□□ 0.53
APTX-231	ENST00000494973	NLRP6	P59044	892 aa		18.33	■□□□□ 0.52
APTX-231	ENST00000494973	XPC	Q01831	940 aa	Predicted RBP	18.33	■□□□□ 0.52
APTX-231	ENST00000494973	AATK	Q6ZMQ8	1374 aa		18.32	■□□□□ 0.52
APTX-231	ENST00000494973	KCNH5	Q8NCM2	988 aa		18.32	■□□□□ 0.52
APTX-231	ENST00000494973	COL16A1	Q07092	1604 aa	Predicted RBP	18.31	■□□□□ 0.52
APTX-231	ENST00000494973	USP19	O94966	1318 aa		18.3	■□□□□ 0.52
APTX-231	ENST00000494973	SLIT3	O75094	1523 aa		18.3	■□□□□ 0.52
APTX-231	ENST00000494973	CCER2	I3L3R5	266 aa		18.3	■□□□□ 0.52
APTX-231	ENST00000494973	LMOD2	Q6P5Q4	547 aa		18.3	■□□□□ 0.52
APTX-231	ENST00000494973	DDX17	Q92841	729 aa	Known RBP	18.29	■□□□□ 0.52
APTX-231	ENST00000494973	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.28	■□□□□ 0.52
APTX-231	ENST00000494973	CNGB1	Q14028	1251 aa	Predicted RBP	18.28	■□□□□ 0.52
APTX-231	ENST00000494973	MARF1	Q9Y4F3	1742 aa	Known RBP	18.28	■□□□□ 0.52
APTX-231	ENST00000494973	KIF24	Q5T7B8	1368 aa		18.28	■□□□□ 0.52
APTX-231	ENST00000494973	SMG6	Q86US8	1419 aa	Known RBP	18.26	■□□□□ 0.51
APTX-231	ENST00000494973	PPP2R1A	P30153	589 aa		18.26	■□□□□ 0.51
APTX-231	ENST00000494973	PHRF1	Q9P1Y6	1649 aa	Known RBP	18.26	■□□□□ 0.51
APTX-231	ENST00000494973	CFAP53	Q96M91	514 aa		18.25	■□□□□ 0.51
APTX-231	ENST00000494973	ABCC6	O95255	1503 aa		18.24	■□□□□ 0.51
APTX-231	ENST00000494973	CRYBG1	Q9Y4K1	1723 aa		18.24	■□□□□ 0.51
APTX-231	ENST00000494973	MIER1	Q8N108	512 aa		18.24	■□□□□ 0.51
APTX-231	ENST00000494973	RTL1	A6NKG5	1358 aa		18.24	■□□□□ 0.51
APTX-231	ENST00000494973	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.24	■□□□□ 0.51
APTX-231	ENST00000494973	SHPRH	Q149N8	1683 aa		18.24	■□□□□ 0.51
APTX-231	ENST00000494973	NFAT5	O94916	1531 aa		18.23	■□□□□ 0.51
APTX-231	ENST00000494973	PNPLA6	Q8IY17	1366 aa		18.23	■□□□□ 0.51
APTX-231	ENST00000494973	JCAD	Q9P266	1359 aa		18.23	■□□□□ 0.51
APTX-231	ENST00000494973	NUTM2G	Q5VZR2	741 aa		18.23	■□□□□ 0.51
APTX-231	ENST00000494973	ZRANB1	Q9UGI0	708 aa		18.23	■□□□□ 0.51
APTX-231	ENST00000494973	TNNT2	P45379	298 aa	Predicted RBP	18.22	■□□□□ 0.51
APTX-231	ENST00000494973	HAP1	P54257	671 aa	Predicted RBP	18.22	■□□□□ 0.51
APTX-231	ENST00000494973	ABCA3	Q99758	1704 aa		18.22	■□□□□ 0.51
APTX-231	ENST00000494973	MAP2	P11137	1827 aa	Known RBP	18.21	■□□□□ 0.51
APTX-231	ENST00000494973	GC	P02774	474 aa		18.21	■□□□□ 0.51
APTX-231	ENST00000494973	CPD	O75976	1380 aa		18.2	■□□□□ 0.5
APTX-231	ENST00000494973	FLT4	P35916	1363 aa		18.2	■□□□□ 0.5
APTX-231	ENST00000494973	MRS2	Q9HD23	443 aa		18.19	■□□□□ 0.5
APTX-231	ENST00000494973	LTN1	O94822	1766 aa		18.19	■□□□□ 0.5
APTX-231	ENST00000494973	INSR	P06213	1382 aa		18.18	■□□□□ 0.5
APTX-231	ENST00000494973	MTHFS	P49914	203 aa		18.18	■□□□□ 0.5
APTX-231	ENST00000494973	POLK	Q9UBT6	870 aa		18.18	■□□□□ 0.5
APTX-231	ENST00000494973	AMPH	P49418	695 aa		18.17	■□□□□ 0.5
APTX-231	ENST00000494973	MAP3K19	Q56UN5	1328 aa		18.17	■□□□□ 0.5
APTX-231	ENST00000494973	SPATA31A6	Q5VVP1	1343 aa		18.17	■□□□□ 0.5
APTX-231	ENST00000494973	BLM	P54132	1417 aa	Predicted RBP	18.16	■□□□□ 0.5
APTX-231	ENST00000494973	SOX12	O15370	315 aa		18.16	■□□□□ 0.5
APTX-231	ENST00000494973	FBXO41	Q8TF61	875 aa		18.16	■□□□□ 0.5
APTX-231	ENST00000494973	ARHGEF25	Q86VW2	580 aa		18.15	■□□□□ 0.5
APTX-231	ENST00000494973	NUDC	Q9Y266	331 aa		18.15	■□□□□ 0.5
APTX-231	ENST00000494973	PPM1G	O15355	546 aa	Predicted RBP	18.14	■□□□□ 0.49
APTX-231	ENST00000494973	RRS1	Q15050	365 aa	Known RBP	18.14	■□□□□ 0.49
APTX-231	ENST00000494973	HSPA1L	P34931	641 aa		18.13	■□□□□ 0.49
APTX-231	ENST00000494973	EMILIN1	Q9Y6C2	1016 aa		18.13	■□□□□ 0.49
APTX-231	ENST00000494973	CABLES1	Q8TDN4	633 aa		18.12	■□□□□ 0.49
APTX-231	ENST00000494973	IP6K1	Q92551	441 aa		18.12	■□□□□ 0.49
APTX-231	ENST00000494973	PRDM11	Q9NQV5	511 aa		18.12	■□□□□ 0.49
APTX-231	ENST00000494973	KIAA0232	Q92628	1395 aa		18.12	■□□□□ 0.49
APTX-231	ENST00000494973	COL3A1	P02461	1466 aa	Predicted RBP	18.12	■□□□□ 0.49
APTX-231	ENST00000494973	PEAK1	Q9H792	1746 aa		18.12	■□□□□ 0.49
APTX-231	ENST00000494973	DIAPH1	O60610	1272 aa	Known RBP	18.11	■□□□□ 0.49
APTX-231	ENST00000494973	HOXC9	P31274	260 aa		18.11	■□□□□ 0.49
APTX-231	ENST00000494973	WDR43	Q15061	677 aa	Known RBP eCLIP	18.11	■□□□□ 0.49

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