RNA–Protein interactions for RNA: ENST00000494783.1

NOTCH1-203, Transcript of notch 1, humanhuman

TSL 3

Gene NOTCH1, Length 652 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-203ENST00000494783 TRPM3Q9HCF6 1732 aaPredicted RBP25.31■■□□□ 1.64
NOTCH1-203ENST00000494783 QRICH2Q9H0J4 1663 aa25.3■■□□□ 1.64
NOTCH1-203ENST00000494783 SLIT2O94813 1529 aa25.3■■□□□ 1.64
NOTCH1-203ENST00000494783 NUTM2GQ5VZR2 741 aa25.29■■□□□ 1.64
NOTCH1-203ENST00000494783 GJD4Q96KN9 370 aaPredicted RBP25.29■■□□□ 1.64
NOTCH1-203ENST00000494783 ITSN1Q15811 1721 aa25.29■■□□□ 1.64
NOTCH1-203ENST00000494783 RGS12O14924 1447 aa25.29■■□□□ 1.64
NOTCH1-203ENST00000494783 ABTB2Q8N961 1025 aa25.28■■□□□ 1.64
NOTCH1-203ENST00000494783 TOPAZ1Q8N9V7 1692 aa25.26■■□□□ 1.63
NOTCH1-203ENST00000494783 CLSPNQ9HAW4 1339 aa25.26■■□□□ 1.63
NOTCH1-203ENST00000494783 ALS2Q96Q42 1657 aa25.26■■□□□ 1.63
NOTCH1-203ENST00000494783 SBNO2Q9Y2G9 1366 aa25.25■■□□□ 1.63
NOTCH1-203ENST00000494783 VPS72Q15906 364 aa25.23■■□□□ 1.63
NOTCH1-203ENST00000494783 ATAD2Q6PL18 1390 aa25.22■■□□□ 1.63
NOTCH1-203ENST00000494783 UPF1Q92900 1129 aaKnown RBP eCLIP25.22■■□□□ 1.63
NOTCH1-203ENST00000494783 PRDM11Q9NQV5 511 aa25.22■■□□□ 1.63
NOTCH1-203ENST00000494783 BTG4Q9NY30 223 aa25.22■■□□□ 1.63
NOTCH1-203ENST00000494783 TIMELESSQ9UNS1 1208 aa25.22■■□□□ 1.63
NOTCH1-203ENST00000494783 BRD4O60885 1362 aaPredicted RBP25.21■■□□□ 1.63
NOTCH1-203ENST00000494783 MARF1Q9Y4F3 1742 aaKnown RBP25.21■■□□□ 1.63
NOTCH1-203ENST00000494783 NLRP13Q86W25 1043 aa25.2■■□□□ 1.62
NOTCH1-203ENST00000494783 ZNF692Q9BU19 519 aaPredicted RBP25.2■■□□□ 1.62
NOTCH1-203ENST00000494783 CCDC9Q9Y3X0 531 aaKnown RBP25.2■■□□□ 1.62
NOTCH1-203ENST00000494783 USP6P35125 1406 aa25.2■■□□□ 1.62
NOTCH1-203ENST00000494783 KIAA0232Q92628 1395 aa25.18■■□□□ 1.62
NOTCH1-203ENST00000494783 ST20-MTHFSA0A0A6YYL1 179 aa25.18■■□□□ 1.62
NOTCH1-203ENST00000494783 ZC3H6P61129 1189 aaKnown RBP25.18■■□□□ 1.62
NOTCH1-203ENST00000494783 ABCA3Q99758 1704 aa25.17■■□□□ 1.62
NOTCH1-203ENST00000494783 USP19O94966 1318 aa25.16■■□□□ 1.62
NOTCH1-203ENST00000494783 CHRNA2Q15822 529 aa25.16■■□□□ 1.62
NOTCH1-203ENST00000494783 NLRP6P59044 892 aa25.15■■□□□ 1.62
NOTCH1-203ENST00000494783 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
NOTCH1-203ENST00000494783 TESK2Q96S53 571 aa25.15■■□□□ 1.62
NOTCH1-203ENST00000494783 SSH2Q76I76 1423 aa25.14■■□□□ 1.62
NOTCH1-203ENST00000494783 GCP02774 474 aa25.14■■□□□ 1.62
NOTCH1-203ENST00000494783 TMC1Q8TDI8 760 aa25.14■■□□□ 1.62
NOTCH1-203ENST00000494783 TTC21BQ7Z4L5 1316 aa25.12■■□□□ 1.61
NOTCH1-203ENST00000494783 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.12■■□□□ 1.61
NOTCH1-203ENST00000494783 SLC24A1O60721 1099 aa25.12■■□□□ 1.61
NOTCH1-203ENST00000494783 PUS7Q96PZ0 661 aaKnown RBP25.12■■□□□ 1.61
NOTCH1-203ENST00000494783 CPSF1Q10570 1443 aaKnown RBP25.12■■□□□ 1.61
NOTCH1-203ENST00000494783 ONECUT3O60422 494 aaPredicted RBP25.11■■□□□ 1.61
NOTCH1-203ENST00000494783 SEPT12Q8IYM1 358 aa25.11■■□□□ 1.61
NOTCH1-203ENST00000494783 GLI3P10071 1580 aa25.1■■□□□ 1.61
NOTCH1-203ENST00000494783 KTN1Q86UP2 1357 aaKnown RBP25.1■■□□□ 1.61
NOTCH1-203ENST00000494783 SLC12A5Q9H2X9 1139 aa25.1■■□□□ 1.61
NOTCH1-203ENST00000494783 CPDO75976 1380 aa25.09■■□□□ 1.61
NOTCH1-203ENST00000494783 COL14A1Q05707 1796 aaKnown RBP25.09■■□□□ 1.61
NOTCH1-203ENST00000494783 PLCH1Q4KWH8 1693 aa25.09■■□□□ 1.61
NOTCH1-203ENST00000494783 TTC21AQ8NDW8 1320 aa25.09■■□□□ 1.61
NOTCH1-203ENST00000494783 NWD2Q9ULI1 1742 aa25.09■■□□□ 1.61
NOTCH1-203ENST00000494783 CRYBG1Q9Y4K1 1723 aa25.09■■□□□ 1.61
NOTCH1-203ENST00000494783 USP47Q96K76 1375 aa25.08■■□□□ 1.61
NOTCH1-203ENST00000494783 STRN4Q9NRL3 753 aa25.08■■□□□ 1.61
NOTCH1-203ENST00000494783 SPATA31A5Q5VU36 1347 aa25.08■■□□□ 1.6
NOTCH1-203ENST00000494783 SPATA31A7Q8IWB4 1347 aa25.08■■□□□ 1.6
NOTCH1-203ENST00000494783 FAM98CQ17RN3 349 aaKnown RBP25.07■■□□□ 1.6
NOTCH1-203ENST00000494783 EP400Q96L91 3159 aa25.07■■□□□ 1.6
NOTCH1-203ENST00000494783 EVA1CP58658 441 aa25.06■■□□□ 1.6
NOTCH1-203ENST00000494783 HDGFL2Q7Z4V5 671 aaPredicted RBP25.06■■□□□ 1.6
NOTCH1-203ENST00000494783 A0A0G2JS52 829 aa25.05■■□□□ 1.6
NOTCH1-203ENST00000494783 MYT1Q01538 1121 aa25.05■■□□□ 1.6
NOTCH1-203ENST00000494783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.05■■□□□ 1.6
NOTCH1-203ENST00000494783 TERF2IPQ9NYB0 399 aa25.05■■□□□ 1.6
NOTCH1-203ENST00000494783 PHRF1Q9P1Y6 1649 aaKnown RBP25.04■■□□□ 1.6
NOTCH1-203ENST00000494783 NRKQ7Z2Y5 1582 aa25.03■■□□□ 1.6
NOTCH1-203ENST00000494783 ZBTB7CA1YPR0 619 aa25.03■■□□□ 1.6
NOTCH1-203ENST00000494783 CD163L1Q9NR16 1453 aa25.02■■□□□ 1.6
NOTCH1-203ENST00000494783 TMF1P82094 1093 aa25.02■■□□□ 1.6
NOTCH1-203ENST00000494783 KRT27Q7Z3Y8 459 aa25.01■■□□□ 1.59
NOTCH1-203ENST00000494783 KCNH5Q8NCM2 988 aa25.01■■□□□ 1.59
NOTCH1-203ENST00000494783 SPATA31A1Q5TZJ5 1347 aa25.01■■□□□ 1.59
NOTCH1-203ENST00000494783 NRAPQ86VF7 1730 aa25■■□□□ 1.59
NOTCH1-203ENST00000494783 SOX12O15370 315 aa24.99■■□□□ 1.59
NOTCH1-203ENST00000494783 LARP1Q6PKG0 1096 aaKnown RBP24.99■■□□□ 1.59
NOTCH1-203ENST00000494783 ZRANB1Q9UGI0 708 aa24.99■■□□□ 1.59
NOTCH1-203ENST00000494783 SLIT3O75094 1523 aa24.98■■□□□ 1.59
NOTCH1-203ENST00000494783 A0A1W2PP64 1363 aa24.98■■□□□ 1.59
NOTCH1-203ENST00000494783 AATKQ6ZMQ8 1374 aa24.98■■□□□ 1.59
NOTCH1-203ENST00000494783 NINLQ9Y2I6 1382 aa24.98■■□□□ 1.59
NOTCH1-203ENST00000494783 NME9Q86XW9 330 aa24.98■■□□□ 1.59
NOTCH1-203ENST00000494783 USP35Q9P2H5 1018 aa24.98■■□□□ 1.59
NOTCH1-203ENST00000494783 CAMTA1Q9Y6Y1 1673 aa24.97■■□□□ 1.59
NOTCH1-203ENST00000494783 ARHGEF25Q86VW2 580 aa24.97■■□□□ 1.59
NOTCH1-203ENST00000494783 CCDC125Q86Z20 511 aa24.97■■□□□ 1.59
NOTCH1-203ENST00000494783 PIK3C2AO00443 1686 aa24.97■■□□□ 1.59
NOTCH1-203ENST00000494783 EDC4Q6P2E9 1401 aaKnown RBP24.95■■□□□ 1.59
NOTCH1-203ENST00000494783 USP31Q70CQ4 1352 aa24.95■■□□□ 1.59
NOTCH1-203ENST00000494783 CDCA8Q53HL2 280 aa24.95■■□□□ 1.58
NOTCH1-203ENST00000494783 AKAP12Q02952 1782 aa24.94■■□□□ 1.58
NOTCH1-203ENST00000494783 AXIN2Q9Y2T1 843 aa24.93■■□□□ 1.58
NOTCH1-203ENST00000494783 BARGINQ6ZT62 677 aa24.92■■□□□ 1.58
NOTCH1-203ENST00000494783 TCP11L2Q8N4U5 519 aa24.92■■□□□ 1.58
NOTCH1-203ENST00000494783 COL5A2P05997 1499 aaPredicted RBP24.91■■□□□ 1.58
NOTCH1-203ENST00000494783 LMO7Q8WWI1 1683 aa24.9■■□□□ 1.58
NOTCH1-203ENST00000494783 THRAP3Q9Y2W1 955 aaKnown RBP24.89■■□□□ 1.58
NOTCH1-203ENST00000494783 ANKRD36BQ8N2N9 1353 aa24.88■■□□□ 1.57
NOTCH1-203ENST00000494783 BLMP54132 1417 aaPredicted RBP24.87■■□□□ 1.57
NOTCH1-203ENST00000494783 MON2Q7Z3U7 1717 aa24.87■■□□□ 1.57
NOTCH1-203ENST00000494783 FAM182BQ5T319 152 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms