RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 TULP4Q9NRJ4 1543 aa16.96■□□□□ 0.31
RAPGEF3-213ENST00000494764 ABCA3Q99758 1704 aa16.96■□□□□ 0.31
RAPGEF3-213ENST00000494764 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.31
RAPGEF3-213ENST00000494764 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.3
RAPGEF3-213ENST00000494764 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
RAPGEF3-213ENST00000494764 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
RAPGEF3-213ENST00000494764 PRDM11Q9NQV5 511 aa16.93■□□□□ 0.3
RAPGEF3-213ENST00000494764 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
RAPGEF3-213ENST00000494764 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
RAPGEF3-213ENST00000494764 ARHGEF28Q8N1W1 1705 aaKnown RBP16.9■□□□□ 0.3
RAPGEF3-213ENST00000494764 BAG6P46379 1132 aa16.9■□□□□ 0.3
RAPGEF3-213ENST00000494764 NBPF8Q3BBV2 869 aa16.9■□□□□ 0.3
RAPGEF3-213ENST00000494764 SPATA31A5Q5VU36 1347 aa16.9■□□□□ 0.3
RAPGEF3-213ENST00000494764 SPATA31A7Q8IWB4 1347 aa16.9■□□□□ 0.3
RAPGEF3-213ENST00000494764 ITSN1Q15811 1721 aa16.9■□□□□ 0.3
RAPGEF3-213ENST00000494764 ZC3H6P61129 1189 aaKnown RBP16.89■□□□□ 0.29
RAPGEF3-213ENST00000494764 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
RAPGEF3-213ENST00000494764 ACEP12821 1306 aa16.89■□□□□ 0.29
RAPGEF3-213ENST00000494764 NRAPQ86VF7 1730 aa16.88■□□□□ 0.29
RAPGEF3-213ENST00000494764 EVA1CP58658 441 aa16.88■□□□□ 0.29
RAPGEF3-213ENST00000494764 CHRNA2Q15822 529 aa16.88■□□□□ 0.29
RAPGEF3-213ENST00000494764 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
RAPGEF3-213ENST00000494764 PLEKHG3A1L390 1219 aa16.87■□□□□ 0.29
RAPGEF3-213ENST00000494764 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
RAPGEF3-213ENST00000494764 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
RAPGEF3-213ENST00000494764 ABTB2Q8N961 1025 aa16.87■□□□□ 0.29
RAPGEF3-213ENST00000494764 KIAA0232Q92628 1395 aa16.87■□□□□ 0.29
RAPGEF3-213ENST00000494764 ATP7BP35670 1465 aa16.86■□□□□ 0.29
RAPGEF3-213ENST00000494764 SRPK2P78362 688 aaKnown RBP16.85■□□□□ 0.29
RAPGEF3-213ENST00000494764 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
RAPGEF3-213ENST00000494764 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
RAPGEF3-213ENST00000494764 SPATA31A1Q5TZJ5 1347 aa16.84■□□□□ 0.29
RAPGEF3-213ENST00000494764 CRYBG1Q9Y4K1 1723 aa16.84■□□□□ 0.29
RAPGEF3-213ENST00000494764 POLR3AO14802 1390 aaPredicted RBP16.83■□□□□ 0.28
RAPGEF3-213ENST00000494764 USP35Q9P2H5 1018 aa16.83■□□□□ 0.28
RAPGEF3-213ENST00000494764 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
RAPGEF3-213ENST00000494764 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF3-213ENST00000494764 PSDA5PKW4 1024 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF3-213ENST00000494764 FAM196AQ6ZSG2 479 aa16.81■□□□□ 0.28
RAPGEF3-213ENST00000494764 CABP2Q9NPB3 220 aa16.81■□□□□ 0.28
RAPGEF3-213ENST00000494764 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
RAPGEF3-213ENST00000494764 PHRF1Q9P1Y6 1649 aaKnown RBP16.79■□□□□ 0.28
RAPGEF3-213ENST00000494764 RGPD1P0DJD0 1748 aa16.79■□□□□ 0.28
RAPGEF3-213ENST00000494764 TRIM37O94972 964 aa16.78■□□□□ 0.28
RAPGEF3-213ENST00000494764 GCP02774 474 aa16.78■□□□□ 0.28
RAPGEF3-213ENST00000494764 CABP1Q9NZU7 370 aa16.78■□□□□ 0.28
RAPGEF3-213ENST00000494764 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
RAPGEF3-213ENST00000494764 PPIP5K1Q6PFW1 1433 aa16.78■□□□□ 0.28
RAPGEF3-213ENST00000494764 LARP1Q6PKG0 1096 aaKnown RBP16.77■□□□□ 0.28
RAPGEF3-213ENST00000494764 BARGINQ6ZT62 677 aa16.77■□□□□ 0.28
RAPGEF3-213ENST00000494764 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
RAPGEF3-213ENST00000494764 THSD7AQ9UPZ6 1657 aa16.76■□□□□ 0.27
RAPGEF3-213ENST00000494764 APBA3O96018 575 aa16.76■□□□□ 0.27
RAPGEF3-213ENST00000494764 NLRP6P59044 892 aa16.76■□□□□ 0.27
RAPGEF3-213ENST00000494764 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
RAPGEF3-213ENST00000494764 TCP11L2Q8N4U5 519 aa16.76■□□□□ 0.27
RAPGEF3-213ENST00000494764 ZBTB7CA1YPR0 619 aa16.75■□□□□ 0.27
RAPGEF3-213ENST00000494764 THRAP3Q9Y2W1 955 aaKnown RBP16.75■□□□□ 0.27
RAPGEF3-213ENST00000494764 SSH2Q76I76 1423 aa16.75■□□□□ 0.27
RAPGEF3-213ENST00000494764 BRD4O60885 1362 aaPredicted RBP16.75■□□□□ 0.27
RAPGEF3-213ENST00000494764 CPDO75976 1380 aa16.75■□□□□ 0.27
RAPGEF3-213ENST00000494764 USP19O94966 1318 aa16.74■□□□□ 0.27
RAPGEF3-213ENST00000494764 R3HDM1Q15032 1099 aaKnown RBP16.74■□□□□ 0.27
RAPGEF3-213ENST00000494764 CAMTA1Q9Y6Y1 1673 aa16.74■□□□□ 0.27
RAPGEF3-213ENST00000494764 EVC2Q86UK5 1308 aa16.73■□□□□ 0.27
RAPGEF3-213ENST00000494764 NEUROD1Q13562 356 aa16.73■□□□□ 0.27
RAPGEF3-213ENST00000494764 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
RAPGEF3-213ENST00000494764 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
RAPGEF3-213ENST00000494764 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
RAPGEF3-213ENST00000494764 NRKQ7Z2Y5 1582 aa16.71■□□□□ 0.27
RAPGEF3-213ENST00000494764 QRICH2Q9H0J4 1663 aa16.71■□□□□ 0.27
RAPGEF3-213ENST00000494764 DISP2A7MBM2 1401 aa16.7■□□□□ 0.26
RAPGEF3-213ENST00000494764 TNS1Q9HBL0 1735 aaKnown RBP16.7■□□□□ 0.26
RAPGEF3-213ENST00000494764 NBPF14Q5TI25 921 aa16.69■□□□□ 0.26
RAPGEF3-213ENST00000494764 LRP5O75197 1615 aa16.69■□□□□ 0.26
RAPGEF3-213ENST00000494764 C11orf95C9JLR9 678 aaPredicted RBP16.68■□□□□ 0.26
RAPGEF3-213ENST00000494764 USP6P35125 1406 aa16.68■□□□□ 0.26
RAPGEF3-213ENST00000494764 LMO7Q8WWI1 1683 aa16.68■□□□□ 0.26
RAPGEF3-213ENST00000494764 TOM1L2Q6ZVM7 507 aa16.67■□□□□ 0.26
RAPGEF3-213ENST00000494764 ROCK2O75116 1388 aaKnown RBP16.66■□□□□ 0.26
RAPGEF3-213ENST00000494764 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
RAPGEF3-213ENST00000494764 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
RAPGEF3-213ENST00000494764 CRB1P82279 1406 aa16.66■□□□□ 0.26
RAPGEF3-213ENST00000494764 COL5A2P05997 1499 aaPredicted RBP16.66■□□□□ 0.26
RAPGEF3-213ENST00000494764 DDB1Q16531 1140 aa16.65■□□□□ 0.26
RAPGEF3-213ENST00000494764 KCNH5Q8NCM2 988 aa16.65■□□□□ 0.26
RAPGEF3-213ENST00000494764 TTC21BQ7Z4L5 1316 aa16.65■□□□□ 0.26
RAPGEF3-213ENST00000494764 AXIN2Q9Y2T1 843 aa16.64■□□□□ 0.25
RAPGEF3-213ENST00000494764 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
RAPGEF3-213ENST00000494764 SOX12O15370 315 aa16.63■□□□□ 0.25
RAPGEF3-213ENST00000494764 PARP4Q9UKK3 1724 aaKnown RBP16.62■□□□□ 0.25
RAPGEF3-213ENST00000494764 SLIT3O75094 1523 aa16.61■□□□□ 0.25
RAPGEF3-213ENST00000494764 CSB-PGBD3P0DP91 1061 aa16.61■□□□□ 0.25
RAPGEF3-213ENST00000494764 ARHGEF25Q86VW2 580 aa16.61■□□□□ 0.25
RAPGEF3-213ENST00000494764 WDR17Q8IZU2 1322 aa16.61■□□□□ 0.25
RAPGEF3-213ENST00000494764 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
RAPGEF3-213ENST00000494764 CDCA7Q9BWT1 371 aaPredicted RBP16.6■□□□□ 0.25
RAPGEF3-213ENST00000494764 KTN1Q86UP2 1357 aaKnown RBP16.6■□□□□ 0.25
RAPGEF3-213ENST00000494764 PIK3C2AO00443 1686 aa16.59■□□□□ 0.25
RAPGEF3-213ENST00000494764 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms