RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 R3HDM1Q15032 1099 aaKnown RBP17.27■□□□□ 0.36
CSNK1E-212ENST00000494610 ANKARQ7Z5J8 1434 aa17.27■□□□□ 0.35
CSNK1E-212ENST00000494610 CRYBG1Q9Y4K1 1723 aa17.27■□□□□ 0.35
CSNK1E-212ENST00000494610 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
CSNK1E-212ENST00000494610 SPATA31A5Q5VU36 1347 aa17.26■□□□□ 0.35
CSNK1E-212ENST00000494610 SPATA31A7Q8IWB4 1347 aa17.26■□□□□ 0.35
CSNK1E-212ENST00000494610 COL14A1Q05707 1796 aaKnown RBP17.26■□□□□ 0.35
CSNK1E-212ENST00000494610 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
CSNK1E-212ENST00000494610 PCGF6Q9BYE7 350 aa17.26■□□□□ 0.35
CSNK1E-212ENST00000494610 ADGRB2O60241 1585 aa17.26■□□□□ 0.35
CSNK1E-212ENST00000494610 EZH2Q15910 746 aaKnown RBP17.25■□□□□ 0.35
CSNK1E-212ENST00000494610 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
CSNK1E-212ENST00000494610 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
CSNK1E-212ENST00000494610 WASLO00401 505 aaPredicted RBP17.23■□□□□ 0.35
CSNK1E-212ENST00000494610 NGDNQ8NEJ9 315 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-212ENST00000494610 TNS1Q9HBL0 1735 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-212ENST00000494610 THSD7AQ9UPZ6 1657 aa17.23■□□□□ 0.35
CSNK1E-212ENST00000494610 TULP4Q9NRJ4 1543 aa17.22■□□□□ 0.35
CSNK1E-212ENST00000494610 RGPD1P0DJD0 1748 aa17.22■□□□□ 0.35
CSNK1E-212ENST00000494610 DCAF11Q8TEB1 546 aa17.22■□□□□ 0.35
CSNK1E-212ENST00000494610 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
CSNK1E-212ENST00000494610 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
CSNK1E-212ENST00000494610 KIAA0232Q92628 1395 aa17.21■□□□□ 0.35
CSNK1E-212ENST00000494610 TRIM37O94972 964 aa17.21■□□□□ 0.35
CSNK1E-212ENST00000494610 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.35
CSNK1E-212ENST00000494610 USP35Q9P2H5 1018 aa17.21■□□□□ 0.35
CSNK1E-212ENST00000494610 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
CSNK1E-212ENST00000494610 SPATA31A1Q5TZJ5 1347 aa17.19■□□□□ 0.34
CSNK1E-212ENST00000494610 NUDT16Q96DE0 195 aaKnown RBP17.18■□□□□ 0.34
CSNK1E-212ENST00000494610 CAMKK2Q96RR4 588 aa17.17■□□□□ 0.34
CSNK1E-212ENST00000494610 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-212ENST00000494610 ATP7BP35670 1465 aa17.17■□□□□ 0.34
CSNK1E-212ENST00000494610 ARHGEF28Q8N1W1 1705 aaKnown RBP17.16■□□□□ 0.34
CSNK1E-212ENST00000494610 APBA3O96018 575 aa17.15■□□□□ 0.34
CSNK1E-212ENST00000494610 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
CSNK1E-212ENST00000494610 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
CSNK1E-212ENST00000494610 LARP1Q6PKG0 1096 aaKnown RBP17.13■□□□□ 0.33
CSNK1E-212ENST00000494610 EIF3AQ14152 1382 aaKnown RBP17.13■□□□□ 0.33
CSNK1E-212ENST00000494610 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
CSNK1E-212ENST00000494610 ACEP12821 1306 aa17.12■□□□□ 0.33
CSNK1E-212ENST00000494610 ITSN1Q15811 1721 aa17.11■□□□□ 0.33
CSNK1E-212ENST00000494610 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
CSNK1E-212ENST00000494610 EVA1CP58658 441 aa17.1■□□□□ 0.33
CSNK1E-212ENST00000494610 NBPF8Q3BBV2 869 aa17.1■□□□□ 0.33
CSNK1E-212ENST00000494610 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
CSNK1E-212ENST00000494610 NRKQ7Z2Y5 1582 aa17.09■□□□□ 0.33
CSNK1E-212ENST00000494610 NUP188Q5SRE5 1749 aa17.08■□□□□ 0.32
CSNK1E-212ENST00000494610 TOPAZ1Q8N9V7 1692 aa17.08■□□□□ 0.32
CSNK1E-212ENST00000494610 RREB1Q92766 1687 aa17.07■□□□□ 0.32
CSNK1E-212ENST00000494610 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
CSNK1E-212ENST00000494610 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
CSNK1E-212ENST00000494610 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
CSNK1E-212ENST00000494610 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
CSNK1E-212ENST00000494610 UTRNP46939 3433 aa17.06■□□□□ 0.32
CSNK1E-212ENST00000494610 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
CSNK1E-212ENST00000494610 PTF1AQ7RTS3 328 aa17.06■□□□□ 0.32
CSNK1E-212ENST00000494610 LMO7Q8WWI1 1683 aa17.05■□□□□ 0.32
CSNK1E-212ENST00000494610 BARGINQ6ZT62 677 aa17.05■□□□□ 0.32
CSNK1E-212ENST00000494610 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
CSNK1E-212ENST00000494610 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
CSNK1E-212ENST00000494610 PLEKHG3A1L390 1219 aa17.03■□□□□ 0.32
CSNK1E-212ENST00000494610 CABP2Q9NPB3 220 aa17.03■□□□□ 0.32
CSNK1E-212ENST00000494610 USP19O94966 1318 aa17.02■□□□□ 0.32
CSNK1E-212ENST00000494610 GCP02774 474 aa17.02■□□□□ 0.32
CSNK1E-212ENST00000494610 PDGFDQ9GZP0 370 aaPredicted RBP17.01■□□□□ 0.31
CSNK1E-212ENST00000494610 PPIP5K1Q6PFW1 1433 aa17■□□□□ 0.31
CSNK1E-212ENST00000494610 CPDO75976 1380 aa17■□□□□ 0.31
CSNK1E-212ENST00000494610 COL5A2P05997 1499 aaPredicted RBP16.99■□□□□ 0.31
CSNK1E-212ENST00000494610 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
CSNK1E-212ENST00000494610 PARD3Q8TEW0 1356 aa16.99■□□□□ 0.31
CSNK1E-212ENST00000494610 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
CSNK1E-212ENST00000494610 YY1P25490 414 aa16.98■□□□□ 0.31
CSNK1E-212ENST00000494610 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
CSNK1E-212ENST00000494610 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
CSNK1E-212ENST00000494610 PEAK1Q9H792 1746 aa16.98■□□□□ 0.31
CSNK1E-212ENST00000494610 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
CSNK1E-212ENST00000494610 CABP1Q9NZU7 370 aa16.97■□□□□ 0.31
CSNK1E-212ENST00000494610 SBF2Q86WG5 1849 aa16.96■□□□□ 0.31
CSNK1E-212ENST00000494610 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.31
CSNK1E-212ENST00000494610 KCNQ2O43526 872 aa16.95■□□□□ 0.3
CSNK1E-212ENST00000494610 NLRP6P59044 892 aa16.95■□□□□ 0.3
CSNK1E-212ENST00000494610 STAC3Q96MF2 364 aa16.95■□□□□ 0.3
CSNK1E-212ENST00000494610 PPP1R1BQ9UD71 204 aaPredicted RBP16.95■□□□□ 0.3
CSNK1E-212ENST00000494610 LRRC37A3O60309 1634 aa16.95■□□□□ 0.3
CSNK1E-212ENST00000494610 CRB1P82279 1406 aa16.95■□□□□ 0.3
CSNK1E-212ENST00000494610 SOX12O15370 315 aa16.94■□□□□ 0.3
CSNK1E-212ENST00000494610 PROM2Q8N271 834 aa16.94■□□□□ 0.3
CSNK1E-212ENST00000494610 SPON1Q9HCB6 807 aa16.94■□□□□ 0.3
CSNK1E-212ENST00000494610 THRAP3Q9Y2W1 955 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-212ENST00000494610 KIAA1210Q9ULL0 1709 aa16.93■□□□□ 0.3
CSNK1E-212ENST00000494610 COL18A1P39060 1754 aa16.93■□□□□ 0.3
CSNK1E-212ENST00000494610 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
CSNK1E-212ENST00000494610 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
CSNK1E-212ENST00000494610 QRICH2Q9H0J4 1663 aa16.92■□□□□ 0.3
CSNK1E-212ENST00000494610 TOM1L2Q6ZVM7 507 aa16.92■□□□□ 0.3
CSNK1E-212ENST00000494610 MARCH10Q8NA82 808 aaPredicted RBP16.92■□□□□ 0.3
CSNK1E-212ENST00000494610 USP6P35125 1406 aa16.92■□□□□ 0.3
CSNK1E-212ENST00000494610 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
CSNK1E-212ENST00000494610 OVOS2A0A0G2JMS6 1433 aa16.91■□□□□ 0.3
CSNK1E-212ENST00000494610 OVOS2A0A0J9YW53 1432 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms