RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 PXDNQ92626 1479 aa12.63□□□□□ -0.39
ABCA1-204ENST00000494467 AHDC1Q5TGY3 1603 aaPredicted RBP12.62□□□□□ -0.39
ABCA1-204ENST00000494467 SBNO1A3KN83 1393 aa12.62□□□□□ -0.39
ABCA1-204ENST00000494467 FYB1O15117 783 aa12.62□□□□□ -0.39
ABCA1-204ENST00000494467 ANP32CO43423 234 aa12.62□□□□□ -0.39
ABCA1-204ENST00000494467 ORAI2Q96SN7 254 aa12.62□□□□□ -0.39
ABCA1-204ENST00000494467 TTC21BQ7Z4L5 1316 aa12.62□□□□□ -0.39
ABCA1-204ENST00000494467 MAP2P11137 1827 aaKnown RBP12.61□□□□□ -0.39
ABCA1-204ENST00000494467 CCER2I3L3R5 266 aa12.61□□□□□ -0.39
ABCA1-204ENST00000494467 ESCO1Q5FWF5 840 aa12.61□□□□□ -0.39
ABCA1-204ENST00000494467 OVOS2A0A0J9YW53 1432 aa12.61□□□□□ -0.39
ABCA1-204ENST00000494467 OVOS2Q6IE36 1432 aa12.61□□□□□ -0.39
ABCA1-204ENST00000494467 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
ABCA1-204ENST00000494467 ROBO1Q9Y6N7 1651 aa12.61□□□□□ -0.39
ABCA1-204ENST00000494467 CRYBG1Q9Y4K1 1723 aa12.6□□□□□ -0.39
ABCA1-204ENST00000494467 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
ABCA1-204ENST00000494467 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
ABCA1-204ENST00000494467 NGDNQ8NEJ9 315 aaKnown RBP12.6□□□□□ -0.39
ABCA1-204ENST00000494467 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
ABCA1-204ENST00000494467 PHRF1Q9P1Y6 1649 aaKnown RBP12.59□□□□□ -0.39
ABCA1-204ENST00000494467 AATKQ6ZMQ8 1374 aa12.59□□□□□ -0.39
ABCA1-204ENST00000494467 PMFBP1Q8TBY8 1022 aa12.59□□□□□ -0.39
ABCA1-204ENST00000494467 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
ABCA1-204ENST00000494467 SMG6Q86US8 1419 aaKnown RBP12.58□□□□□ -0.4
ABCA1-204ENST00000494467 MIER1Q8N108 512 aa12.58□□□□□ -0.4
ABCA1-204ENST00000494467 MYBBP1AQ9BQG0 1328 aaKnown RBP12.58□□□□□ -0.4
ABCA1-204ENST00000494467 SLIT3O75094 1523 aa12.57□□□□□ -0.4
ABCA1-204ENST00000494467 PSME1Q06323 249 aa12.57□□□□□ -0.4
ABCA1-204ENST00000494467 CERKQ8TCT0 537 aa12.57□□□□□ -0.4
ABCA1-204ENST00000494467 INSRP06213 1382 aa12.56□□□□□ -0.4
ABCA1-204ENST00000494467 COL22A1Q8NFW1 1626 aaPredicted RBP12.56□□□□□ -0.4
ABCA1-204ENST00000494467 FOXO3O43524 673 aa12.56□□□□□ -0.4
ABCA1-204ENST00000494467 TOM1O60784 492 aa12.56□□□□□ -0.4
ABCA1-204ENST00000494467 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
ABCA1-204ENST00000494467 KRT28Q7Z3Y7 464 aa12.55□□□□□ -0.4
ABCA1-204ENST00000494467 NLRP13Q86W25 1043 aa12.55□□□□□ -0.4
ABCA1-204ENST00000494467 USP19O94966 1318 aa12.55□□□□□ -0.4
ABCA1-204ENST00000494467 KIF24Q5T7B8 1368 aa12.55□□□□□ -0.4
ABCA1-204ENST00000494467 NFAT5O94916 1531 aa12.54□□□□□ -0.4
ABCA1-204ENST00000494467 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
ABCA1-204ENST00000494467 NME9Q86XW9 330 aa12.54□□□□□ -0.4
ABCA1-204ENST00000494467 FBXO41Q8TF61 875 aa12.54□□□□□ -0.4
ABCA1-204ENST00000494467 SPATA31A3Q5VYP0 1347 aa12.54□□□□□ -0.4
ABCA1-204ENST00000494467 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
ABCA1-204ENST00000494467 ARHGEF10O15013 1369 aa12.54□□□□□ -0.4
ABCA1-204ENST00000494467 PNPLA6Q8IY17 1366 aa12.54□□□□□ -0.4
ABCA1-204ENST00000494467 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
ABCA1-204ENST00000494467 ABCC6O95255 1503 aa12.53□□□□□ -0.4
ABCA1-204ENST00000494467 PPP2R1AP30153 589 aa12.53□□□□□ -0.4
ABCA1-204ENST00000494467 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
ABCA1-204ENST00000494467 PHLPP1O60346 1717 aa12.53□□□□□ -0.4
ABCA1-204ENST00000494467 LTN1O94822 1766 aa12.52□□□□□ -0.41
ABCA1-204ENST00000494467 SOCS7O14512 581 aa12.52□□□□□ -0.41
ABCA1-204ENST00000494467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.41
ABCA1-204ENST00000494467 COG3Q96JB2 828 aa12.52□□□□□ -0.41
ABCA1-204ENST00000494467 GGNBP2Q9H3C7 697 aa12.52□□□□□ -0.41
ABCA1-204ENST00000494467 CDK12Q9NYV4 1490 aaPredicted RBP12.51□□□□□ -0.41
ABCA1-204ENST00000494467 ABTB2Q8N961 1025 aa12.5□□□□□ -0.41
ABCA1-204ENST00000494467 COL3A1P02461 1466 aaPredicted RBP12.5□□□□□ -0.41
ABCA1-204ENST00000494467 SHPRHQ149N8 1683 aa12.5□□□□□ -0.41
ABCA1-204ENST00000494467 COL18A1P39060 1754 aa12.49□□□□□ -0.41
ABCA1-204ENST00000494467 PEAK1Q9H792 1746 aa12.49□□□□□ -0.41
ABCA1-204ENST00000494467 KCNH5Q8NCM2 988 aa12.49□□□□□ -0.41
ABCA1-204ENST00000494467 RTL1A6NKG5 1358 aa12.48□□□□□ -0.41
ABCA1-204ENST00000494467 NLRP6P59044 892 aa12.48□□□□□ -0.41
ABCA1-204ENST00000494467 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
ABCA1-204ENST00000494467 CPDO75976 1380 aa12.47□□□□□ -0.41
ABCA1-204ENST00000494467 LRRC59Q96AG4 307 aaKnown RBP12.47□□□□□ -0.41
ABCA1-204ENST00000494467 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
ABCA1-204ENST00000494467 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
ABCA1-204ENST00000494467 UBAP1LF5GYI3 381 aa12.46□□□□□ -0.41
ABCA1-204ENST00000494467 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
ABCA1-204ENST00000494467 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
ABCA1-204ENST00000494467 GCP02774 474 aa12.45□□□□□ -0.42
ABCA1-204ENST00000494467 MTHFSP49914 203 aa12.45□□□□□ -0.42
ABCA1-204ENST00000494467 CCDC184Q52MB2 194 aa12.45□□□□□ -0.42
ABCA1-204ENST00000494467 ILDR2Q71H61 639 aa12.45□□□□□ -0.42
ABCA1-204ENST00000494467 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
ABCA1-204ENST00000494467 XPCQ01831 940 aaPredicted RBP12.44□□□□□ -0.42
ABCA1-204ENST00000494467 LMO7Q8WWI1 1683 aa12.44□□□□□ -0.42
ABCA1-204ENST00000494467 FAM208AQ9UK61 1670 aaKnown RBP12.44□□□□□ -0.42
ABCA1-204ENST00000494467 FLT4P35916 1363 aa12.43□□□□□ -0.42
ABCA1-204ENST00000494467 CAMTA1Q9Y6Y1 1673 aa12.43□□□□□ -0.42
ABCA1-204ENST00000494467 ARHGEF25Q86VW2 580 aa12.43□□□□□ -0.42
ABCA1-204ENST00000494467 MRS2Q9HD23 443 aa12.43□□□□□ -0.42
ABCA1-204ENST00000494467 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
ABCA1-204ENST00000494467 MAP3K19Q56UN5 1328 aa12.42□□□□□ -0.42
ABCA1-204ENST00000494467 CFAP53Q96M91 514 aa12.42□□□□□ -0.42
ABCA1-204ENST00000494467 BLMP54132 1417 aaPredicted RBP12.42□□□□□ -0.42
ABCA1-204ENST00000494467 COL14A1Q05707 1796 aaKnown RBP12.41□□□□□ -0.42
ABCA1-204ENST00000494467 NCAPD2Q15021 1401 aa12.4□□□□□ -0.42
ABCA1-204ENST00000494467 IP6K1Q92551 441 aa12.4□□□□□ -0.42
ABCA1-204ENST00000494467 EMILIN1Q9Y6C2 1016 aa12.4□□□□□ -0.42
ABCA1-204ENST00000494467 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
ABCA1-204ENST00000494467 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
ABCA1-204ENST00000494467 NWD2Q9ULI1 1742 aa12.39□□□□□ -0.43
ABCA1-204ENST00000494467 FBLN1P23142 703 aa12.38□□□□□ -0.43
ABCA1-204ENST00000494467 HOXC9P31274 260 aa12.38□□□□□ -0.43
ABCA1-204ENST00000494467 IL13P35225 146 aa12.38□□□□□ -0.43
ABCA1-204ENST00000494467 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms