RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 KCNA6P17658 529 aa9.17□□□□□ -0.94
MSH5-217ENST00000494458 NWD1Q149M9 1564 aa9.16□□□□□ -0.94
MSH5-217ENST00000494458 BLMP54132 1417 aaPredicted RBP9.16□□□□□ -0.94
MSH5-217ENST00000494458 ANKARQ7Z5J8 1434 aa9.16□□□□□ -0.94
MSH5-217ENST00000494458 FAM9BQ8IZU0 186 aa9.16□□□□□ -0.94
MSH5-217ENST00000494458 BCANQ96GW7 911 aa9.16□□□□□ -0.94
MSH5-217ENST00000494458 TOPAZ1Q8N9V7 1692 aa9.16□□□□□ -0.94
MSH5-217ENST00000494458 EDC4Q6P2E9 1401 aaKnown RBP9.15□□□□□ -0.94
MSH5-217ENST00000494458 PPIP5K1Q6PFW1 1433 aa9.15□□□□□ -0.94
MSH5-217ENST00000494458 PNPLA6Q8IY17 1366 aa9.15□□□□□ -0.94
MSH5-217ENST00000494458 HDGFL2Q7Z4V5 671 aaPredicted RBP9.15□□□□□ -0.94
MSH5-217ENST00000494458 NCOA3Q9Y6Q9 1424 aa9.14□□□□□ -0.95
MSH5-217ENST00000494458 HNRNPUQ00839 825 aaKnown RBP eCLIP9.14□□□□□ -0.95
MSH5-217ENST00000494458 AATKQ6ZMQ8 1374 aa9.13□□□□□ -0.95
MSH5-217ENST00000494458 MORC1Q86VD1 984 aa9.13□□□□□ -0.95
MSH5-217ENST00000494458 AKAP12Q02952 1782 aa9.12□□□□□ -0.95
MSH5-217ENST00000494458 NCKAP5LQ9HCH0 1330 aa9.12□□□□□ -0.95
MSH5-217ENST00000494458 MON2Q7Z3U7 1717 aa9.12□□□□□ -0.95
MSH5-217ENST00000494458 ANKRD26Q9UPS8 1709 aa9.12□□□□□ -0.95
MSH5-217ENST00000494458 NGEFQ8N5V2 710 aa9.12□□□□□ -0.95
MSH5-217ENST00000494458 ADAMTS8Q9UP79 889 aa9.12□□□□□ -0.95
MSH5-217ENST00000494458 LMTK3Q96Q04 1460 aa9.12□□□□□ -0.95
MSH5-217ENST00000494458 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
MSH5-217ENST00000494458 NKTRP30414 1462 aaKnown RBP9.11□□□□□ -0.95
MSH5-217ENST00000494458 SMG6Q86US8 1419 aaKnown RBP9.11□□□□□ -0.95
MSH5-217ENST00000494458 NRKQ7Z2Y5 1582 aa9.11□□□□□ -0.95
MSH5-217ENST00000494458 USP31Q70CQ4 1352 aa9.11□□□□□ -0.95
MSH5-217ENST00000494458 ACEP12821 1306 aa9.1□□□□□ -0.95
MSH5-217ENST00000494458 ZNF521Q96K83 1311 aa9.1□□□□□ -0.95
MSH5-217ENST00000494458 COL3A1P02461 1466 aaPredicted RBP9.1□□□□□ -0.95
MSH5-217ENST00000494458 MTHFSP49914 203 aa9.1□□□□□ -0.95
MSH5-217ENST00000494458 PDE3BQ13370 1112 aa9.1□□□□□ -0.95
MSH5-217ENST00000494458 LHX8Q68G74 356 aa9.1□□□□□ -0.95
MSH5-217ENST00000494458 USP6P35125 1406 aa9.1□□□□□ -0.95
MSH5-217ENST00000494458 FMN2Q9NZ56 1722 aa9.1□□□□□ -0.95
MSH5-217ENST00000494458 TTC21BQ7Z4L5 1316 aa9.09□□□□□ -0.95
MSH5-217ENST00000494458 CNGB1Q14028 1251 aaPredicted RBP9.09□□□□□ -0.95
MSH5-217ENST00000494458 GGNBP2Q9H3C7 697 aa9.09□□□□□ -0.95
MSH5-217ENST00000494458 TTC21AQ8NDW8 1320 aa9.08□□□□□ -0.96
MSH5-217ENST00000494458 OVOS2A0A0J9YW53 1432 aa9.08□□□□□ -0.96
MSH5-217ENST00000494458 OVOS2Q6IE36 1432 aa9.08□□□□□ -0.96
MSH5-217ENST00000494458 SHPRHQ149N8 1683 aa9.08□□□□□ -0.96
MSH5-217ENST00000494458 C19orf67A6NJJ6 358 aa9.08□□□□□ -0.96
MSH5-217ENST00000494458 POLKQ9UBT6 870 aa9.08□□□□□ -0.96
MSH5-217ENST00000494458 RNF123Q5XPI4 1314 aa9.07□□□□□ -0.96
MSH5-217ENST00000494458 DCCP43146 1447 aa9.07□□□□□ -0.96
MSH5-217ENST00000494458 MST1RQ04912 1400 aa9.07□□□□□ -0.96
MSH5-217ENST00000494458 LRRC7Q96NW7 1537 aa9.07□□□□□ -0.96
MSH5-217ENST00000494458 TRMT2AQ8IZ69 625 aaKnown RBP9.07□□□□□ -0.96
MSH5-217ENST00000494458 GTF3C3Q9Y5Q9 886 aa9.07□□□□□ -0.96
MSH5-217ENST00000494458 ITSN1Q15811 1721 aa9.07□□□□□ -0.96
MSH5-217ENST00000494458 NALCNQ8IZF0 1738 aa9.07□□□□□ -0.96
MSH5-217ENST00000494458 KIF20BQ96Q89 1820 aa9.07□□□□□ -0.96
MSH5-217ENST00000494458 USP54Q70EL1 1684 aa9.07□□□□□ -0.96
MSH5-217ENST00000494458 NME9Q86XW9 330 aa9.06□□□□□ -0.96
MSH5-217ENST00000494458 C19orf44Q9H6X5 657 aa9.06□□□□□ -0.96
MSH5-217ENST00000494458 STRCQ7RTU9 1775 aa9.06□□□□□ -0.96
MSH5-217ENST00000494458 GABBR2O75899 941 aa9.05□□□□□ -0.96
MSH5-217ENST00000494458 WDR43Q15061 677 aaKnown RBP eCLIP9.05□□□□□ -0.96
MSH5-217ENST00000494458 CFAP53Q96M91 514 aa9.05□□□□□ -0.96
MSH5-217ENST00000494458 PLEKHF1Q96S99 279 aa9.05□□□□□ -0.96
MSH5-217ENST00000494458 CCDC27Q2M243 656 aa9.04□□□□□ -0.96
MSH5-217ENST00000494458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
MSH5-217ENST00000494458 COG3Q96JB2 828 aa9.04□□□□□ -0.96
MSH5-217ENST00000494458 NUDCQ9Y266 331 aa9.04□□□□□ -0.96
MSH5-217ENST00000494458 STRCP1A6NGW2 1772 aa9.04□□□□□ -0.96
MSH5-217ENST00000494458 IQSEC2Q5JU85 1478 aa9.03□□□□□ -0.96
MSH5-217ENST00000494458 CDK12Q9NYV4 1490 aaPredicted RBP9.03□□□□□ -0.96
MSH5-217ENST00000494458 KIF24Q5T7B8 1368 aa9.03□□□□□ -0.96
MSH5-217ENST00000494458 PRKAR2AP13861 404 aaKnown RBP9.03□□□□□ -0.96
MSH5-217ENST00000494458 IL13P35225 146 aa9.03□□□□□ -0.96
MSH5-217ENST00000494458 HSPA2P54652 639 aa9.03□□□□□ -0.96
MSH5-217ENST00000494458 PROSER2Q86WR7 435 aaPredicted RBP9.03□□□□□ -0.96
MSH5-217ENST00000494458 RUNDC1Q96C34 613 aa9.03□□□□□ -0.96
MSH5-217ENST00000494458 ZRANB1Q9UGI0 708 aa9.03□□□□□ -0.96
MSH5-217ENST00000494458 PHF8Q9UPP1 1060 aa9.03□□□□□ -0.96
MSH5-217ENST00000494458 RGPD8O14715 1765 aaPredicted RBP9.03□□□□□ -0.96
MSH5-217ENST00000494458 FCHSD2O94868 740 aa9.02□□□□□ -0.97
MSH5-217ENST00000494458 TNNT2P45379 298 aaPredicted RBP9.02□□□□□ -0.97
MSH5-217ENST00000494458 PMFBP1Q8TBY8 1022 aa9.02□□□□□ -0.97
MSH5-217ENST00000494458 C1orf167Q5SNV9 1468 aa9.02□□□□□ -0.97
MSH5-217ENST00000494458 TMEM94Q12767 1356 aa9.01□□□□□ -0.97
MSH5-217ENST00000494458 APAF1O14727 1248 aa9.01□□□□□ -0.97
MSH5-217ENST00000494458 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
MSH5-217ENST00000494458 ERICH6BQ5W0A0 696 aa9.01□□□□□ -0.97
MSH5-217ENST00000494458 NGDNQ8NEJ9 315 aaKnown RBP9.01□□□□□ -0.97
MSH5-217ENST00000494458 MARF1Q9Y4F3 1742 aaKnown RBP9□□□□□ -0.97
MSH5-217ENST00000494458 NUTM2FA1L443 756 aa9□□□□□ -0.97
MSH5-217ENST00000494458 FBLN1P23142 703 aa9□□□□□ -0.97
MSH5-217ENST00000494458 FOXD4L1Q9NU39 408 aa9□□□□□ -0.97
MSH5-217ENST00000494458 EMILIN1Q9Y6C2 1016 aa9□□□□□ -0.97
MSH5-217ENST00000494458 MAP2P11137 1827 aaKnown RBP9□□□□□ -0.97
MSH5-217ENST00000494458 PIK3C2AO00443 1686 aa9□□□□□ -0.97
MSH5-217ENST00000494458 SLFN5Q08AF3 891 aa8.99□□□□□ -0.97
MSH5-217ENST00000494458 DUSP27Q5VZP5 1158 aa8.99□□□□□ -0.97
MSH5-217ENST00000494458 WDR63Q8IWG1 891 aa8.99□□□□□ -0.97
MSH5-217ENST00000494458 WWC1Q8IX03 1113 aa8.99□□□□□ -0.97
MSH5-217ENST00000494458 TCP11L2Q8N4U5 519 aa8.99□□□□□ -0.97
MSH5-217ENST00000494458 RBM33Q96EV2 1170 aaKnown RBP8.99□□□□□ -0.97
MSH5-217ENST00000494458 RSPH6AQ9H0K4 717 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms