RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 USP6P35125 1406 aa32.91■■■□□ 2.86
CLIC3-203ENST00000494426 TMF1P82094 1093 aa32.9■■■□□ 2.86
CLIC3-203ENST00000494426 CPSF1Q10570 1443 aaKnown RBP32.89■■■□□ 2.86
CLIC3-203ENST00000494426 SSH2Q76I76 1423 aa32.88■■■□□ 2.85
CLIC3-203ENST00000494426 PLEKHG5O94827 1062 aa32.88■■■□□ 2.85
CLIC3-203ENST00000494426 SLC12A5Q9H2X9 1139 aa32.88■■■□□ 2.85
CLIC3-203ENST00000494426 CRYBG1Q9Y4K1 1723 aa32.88■■■□□ 2.85
CLIC3-203ENST00000494426 CD163L1Q9NR16 1453 aa32.87■■■□□ 2.85
CLIC3-203ENST00000494426 HSPA5P11021 654 aaKnown RBP32.87■■■□□ 2.85
CLIC3-203ENST00000494426 EIF4G2P78344 907 aaKnown RBP eCLIP32.87■■■□□ 2.85
CLIC3-203ENST00000494426 C8orf37Q96NL8 207 aa32.87■■■□□ 2.85
CLIC3-203ENST00000494426 ZNF692Q9BU19 519 aaPredicted RBP32.87■■■□□ 2.85
CLIC3-203ENST00000494426 BRD4O60885 1362 aaPredicted RBP32.86■■■□□ 2.85
CLIC3-203ENST00000494426 TMC1Q8TDI8 760 aa32.86■■■□□ 2.85
CLIC3-203ENST00000494426 POTEAQ6S8J7 498 aa32.84■■■□□ 2.85
CLIC3-203ENST00000494426 AFF2P51816 1311 aa32.83■■■□□ 2.85
CLIC3-203ENST00000494426 MON2Q7Z3U7 1717 aa32.83■■■□□ 2.85
CLIC3-203ENST00000494426 NUTM2GQ5VZR2 741 aa32.83■■■□□ 2.85
CLIC3-203ENST00000494426 NRKQ7Z2Y5 1582 aa32.81■■■□□ 2.84
CLIC3-203ENST00000494426 ABTB2Q8N961 1025 aa32.81■■■□□ 2.84
CLIC3-203ENST00000494426 NGLY1Q96IV0 654 aa32.81■■■□□ 2.84
CLIC3-203ENST00000494426 KTN1Q86UP2 1357 aaKnown RBP32.8■■■□□ 2.84
CLIC3-203ENST00000494426 HAP1P54257 671 aaPredicted RBP32.79■■■□□ 2.84
CLIC3-203ENST00000494426 TTC21BQ7Z4L5 1316 aa32.78■■■□□ 2.84
CLIC3-203ENST00000494426 PHRF1Q9P1Y6 1649 aaKnown RBP32.77■■■□□ 2.84
CLIC3-203ENST00000494426 ZNF772Q68DY9 489 aaPredicted RBP32.77■■■□□ 2.84
CLIC3-203ENST00000494426 FNBP4Q8N3X1 1017 aaPredicted RBP32.77■■■□□ 2.84
CLIC3-203ENST00000494426 NINLQ9Y2I6 1382 aa32.77■■■□□ 2.84
CLIC3-203ENST00000494426 PIK3C2AO00443 1686 aa32.77■■■□□ 2.84
CLIC3-203ENST00000494426 CDCA8Q53HL2 280 aa32.76■■■□□ 2.83
CLIC3-203ENST00000494426 A0A1W2PP64 1363 aa32.75■■■□□ 2.83
CLIC3-203ENST00000494426 HDGFL2Q7Z4V5 671 aaPredicted RBP32.74■■■□□ 2.83
CLIC3-203ENST00000494426 TERF2IPQ9NYB0 399 aa32.73■■■□□ 2.83
CLIC3-203ENST00000494426 USP19O94966 1318 aa32.73■■■□□ 2.83
CLIC3-203ENST00000494426 NLRP13Q86W25 1043 aa32.72■■■□□ 2.83
CLIC3-203ENST00000494426 TTC21AQ8NDW8 1320 aa32.72■■■□□ 2.83
CLIC3-203ENST00000494426 FAM83GA6ND36 823 aa32.71■■■□□ 2.83
CLIC3-203ENST00000494426 USP21Q9UK80 565 aa32.71■■■□□ 2.83
CLIC3-203ENST00000494426 MYOM1P52179 1685 aa32.71■■■□□ 2.83
CLIC3-203ENST00000494426 SLIT2O94813 1529 aa32.71■■■□□ 2.83
CLIC3-203ENST00000494426 BCL9LQ86UU0 1499 aa32.7■■■□□ 2.83
CLIC3-203ENST00000494426 NLRP6P59044 892 aa32.7■■■□□ 2.83
CLIC3-203ENST00000494426 EDC4Q6P2E9 1401 aaKnown RBP32.68■■■□□ 2.82
CLIC3-203ENST00000494426 PLCH1Q4KWH8 1693 aa32.67■■■□□ 2.82
CLIC3-203ENST00000494426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.67■■■□□ 2.82
CLIC3-203ENST00000494426 ANKRD36BQ8N2N9 1353 aa32.67■■■□□ 2.82
CLIC3-203ENST00000494426 C11orf95C9JLR9 678 aaPredicted RBP32.66■■■□□ 2.82
CLIC3-203ENST00000494426 QTRT2Q9H974 415 aaKnown RBP32.66■■■□□ 2.82
CLIC3-203ENST00000494426 SLIT3O75094 1523 aa32.65■■■□□ 2.82
CLIC3-203ENST00000494426 GCP02774 474 aa32.64■■■□□ 2.82
CLIC3-203ENST00000494426 COL14A1Q05707 1796 aaKnown RBP32.64■■■□□ 2.82
CLIC3-203ENST00000494426 ZRANB1Q9UGI0 708 aa32.64■■■□□ 2.82
CLIC3-203ENST00000494426 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.63■■■□□ 2.81
CLIC3-203ENST00000494426 NWD2Q9ULI1 1742 aa32.63■■■□□ 2.81
CLIC3-203ENST00000494426 KIAA0232Q92628 1395 aa32.63■■■□□ 2.81
CLIC3-203ENST00000494426 ZC3H6P61129 1189 aaKnown RBP32.63■■■□□ 2.81
CLIC3-203ENST00000494426 NME9Q86XW9 330 aa32.63■■■□□ 2.81
CLIC3-203ENST00000494426 ATRNO75882 1429 aa32.61■■■□□ 2.81
CLIC3-203ENST00000494426 UNC5CLQ8IV45 518 aa32.61■■■□□ 2.81
CLIC3-203ENST00000494426 USP54Q70EL1 1684 aa32.61■■■□□ 2.81
CLIC3-203ENST00000494426 USP31Q70CQ4 1352 aa32.6■■■□□ 2.81
CLIC3-203ENST00000494426 PRDM11Q9NQV5 511 aa32.59■■■□□ 2.81
CLIC3-203ENST00000494426 TRPC5Q9UL62 973 aaPredicted RBP32.59■■■□□ 2.81
CLIC3-203ENST00000494426 NRAPQ86VF7 1730 aa32.58■■■□□ 2.81
CLIC3-203ENST00000494426 RXRBP28702 533 aa32.58■■■□□ 2.81
CLIC3-203ENST00000494426 POLR3GLQ9BT43 218 aa32.58■■■□□ 2.81
CLIC3-203ENST00000494426 CPDO75976 1380 aa32.58■■■□□ 2.81
CLIC3-203ENST00000494426 CHRNA2Q15822 529 aa32.57■■■□□ 2.8
CLIC3-203ENST00000494426 BTG4Q9NY30 223 aa32.56■■■□□ 2.8
CLIC3-203ENST00000494426 RBM6P78332 1123 aaKnown RBP32.55■■■□□ 2.8
CLIC3-203ENST00000494426 CARD14Q9BXL6 1004 aa32.55■■■□□ 2.8
CLIC3-203ENST00000494426 LMO7Q8WWI1 1683 aa32.52■■■□□ 2.8
CLIC3-203ENST00000494426 NFAT5O94916 1531 aa32.51■■■□□ 2.8
CLIC3-203ENST00000494426 KCNH5Q8NCM2 988 aa32.51■■■□□ 2.79
CLIC3-203ENST00000494426 OVOS2A0A0J9YW53 1432 aa32.51■■■□□ 2.79
CLIC3-203ENST00000494426 OVOS2Q6IE36 1432 aa32.51■■■□□ 2.79
CLIC3-203ENST00000494426 VPS72Q15906 364 aa32.49■■■□□ 2.79
CLIC3-203ENST00000494426 GJD4Q96KN9 370 aaPredicted RBP32.49■■■□□ 2.79
CLIC3-203ENST00000494426 CAMTA1Q9Y6Y1 1673 aa32.49■■■□□ 2.79
CLIC3-203ENST00000494426 KIF7Q2M1P5 1343 aa32.49■■■□□ 2.79
CLIC3-203ENST00000494426 COL18A1P39060 1754 aa32.48■■■□□ 2.79
CLIC3-203ENST00000494426 SOX12O15370 315 aa32.48■■■□□ 2.79
CLIC3-203ENST00000494426 GLI3P10071 1580 aa32.48■■■□□ 2.79
CLIC3-203ENST00000494426 CDK12Q9NYV4 1490 aaPredicted RBP32.48■■■□□ 2.79
CLIC3-203ENST00000494426 FYB1O15117 783 aa32.47■■■□□ 2.79
CLIC3-203ENST00000494426 NSD3Q9BZ95 1437 aa32.46■■■□□ 2.79
CLIC3-203ENST00000494426 ARHGEF25Q86VW2 580 aa32.46■■■□□ 2.79
CLIC3-203ENST00000494426 KIF20BQ96Q89 1820 aa32.44■■■□□ 2.78
CLIC3-203ENST00000494426 AATKQ6ZMQ8 1374 aa32.44■■■□□ 2.78
CLIC3-203ENST00000494426 RGS12O14924 1447 aa32.43■■■□□ 2.78
CLIC3-203ENST00000494426 ZBTB7CA1YPR0 619 aa32.43■■■□□ 2.78
CLIC3-203ENST00000494426 GGNBP2Q9H3C7 697 aa32.42■■■□□ 2.78
CLIC3-203ENST00000494426 PANK3Q9H999 370 aa32.42■■■□□ 2.78
CLIC3-203ENST00000494426 COG3Q96JB2 828 aa32.41■■■□□ 2.78
CLIC3-203ENST00000494426 AXIN2Q9Y2T1 843 aa32.4■■■□□ 2.78
CLIC3-203ENST00000494426 RGPD5Q99666 1765 aa32.4■■■□□ 2.78
CLIC3-203ENST00000494426 STRN4Q9NRL3 753 aa32.39■■■□□ 2.78
CLIC3-203ENST00000494426 CCDC9Q9Y3X0 531 aaKnown RBP32.39■■■□□ 2.78
CLIC3-203ENST00000494426 LTN1O94822 1766 aa32.39■■■□□ 2.78
CLIC3-203ENST00000494426 COL5A2P05997 1499 aaPredicted RBP32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms