RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 PNMA1Q8ND90 353 aa9.48□□□□□ -0.89
SNX13-210ENST00000494402 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
SNX13-210ENST00000494402 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
SNX13-210ENST00000494402 SUGT1Q9Y2Z0 365 aa9.48□□□□□ -0.89
SNX13-210ENST00000494402 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
SNX13-210ENST00000494402 TPD52L2O43399 206 aaKnown RBP9.47□□□□□ -0.89
SNX13-210ENST00000494402 SLC34A2O95436 690 aa9.47□□□□□ -0.89
SNX13-210ENST00000494402 ATP2B4P23634 1241 aa9.47□□□□□ -0.89
SNX13-210ENST00000494402 FOSBP53539 338 aa9.47□□□□□ -0.89
SNX13-210ENST00000494402 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNX13-210ENST00000494402 COL19A1Q14993 1142 aa9.47□□□□□ -0.89
SNX13-210ENST00000494402 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
SNX13-210ENST00000494402 CDCA7Q9BWT1 371 aaPredicted RBP9.47□□□□□ -0.89
SNX13-210ENST00000494402 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
SNX13-210ENST00000494402 IGBP1P78318 339 aa9.46□□□□□ -0.9
SNX13-210ENST00000494402 SDE2Q6IQ49 451 aa9.46□□□□□ -0.9
SNX13-210ENST00000494402 PADI6Q6TGC4 694 aa9.46□□□□□ -0.9
SNX13-210ENST00000494402 RBM33Q96EV2 1170 aaKnown RBP9.46□□□□□ -0.9
SNX13-210ENST00000494402 SLAIN2Q9P270 581 aa9.46□□□□□ -0.9
SNX13-210ENST00000494402 hCG_2014768A0A024R1R8 64 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 EXOC8Q8IYI6 725 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 LARGE2Q8N3Y3 721 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 NFATC2IPQ8NCF5 419 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 CERKQ8TCT0 537 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 ARMC5Q96C12 935 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 ASB16Q96NS5 453 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 EGFL7Q9UHF1 273 aa9.45□□□□□ -0.9
SNX13-210ENST00000494402 USP17L15C9J2P7 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L10C9JJH3 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L13C9JLJ4 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L12C9JPN9 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L11C9JVI0 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L21D6R901 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L18D6R9N7 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L22D6RA61 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L17D6RBQ6 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L19D6RCP7 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L20D6RJB6 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 ATP2B1P20020 1258 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 MAPK1P28482 360 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 EGFLAMQ63HQ2 1017 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 ZSCAN29Q8IWY8 852 aaPredicted RBP9.44□□□□□ -0.9
SNX13-210ENST00000494402 HELBQ8NG08 1087 aaPredicted RBP9.44□□□□□ -0.9
SNX13-210ENST00000494402 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 PRKAG2Q9UGJ0 569 aa9.44□□□□□ -0.9
SNX13-210ENST00000494402 USP17L3A6NCW0 530 aa9.43□□□□□ -0.9
SNX13-210ENST00000494402 USP17L4A6NCW7 530 aa9.43□□□□□ -0.9
SNX13-210ENST00000494402 IBSPP21815 317 aaPredicted RBP9.43□□□□□ -0.9
SNX13-210ENST00000494402 PTPROQ16827 1216 aa9.43□□□□□ -0.9
SNX13-210ENST00000494402 CCDC144BQ3MJ40 725 aa9.43□□□□□ -0.9
SNX13-210ENST00000494402 EAPPQ56P03 285 aaPredicted RBP9.43□□□□□ -0.9
SNX13-210ENST00000494402 USP17L2Q6R6M4 530 aa9.43□□□□□ -0.9
SNX13-210ENST00000494402 USP17L1Q7RTZ2 530 aa9.43□□□□□ -0.9
SNX13-210ENST00000494402 SLC43A3Q8NBI5 491 aa9.43□□□□□ -0.9
SNX13-210ENST00000494402 NLRP2Q9NX02 1062 aa9.43□□□□□ -0.9
SNX13-210ENST00000494402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
SNX13-210ENST00000494402 FAM69CQ0P6D2 419 aa9.42□□□□□ -0.9
SNX13-210ENST00000494402 C9orf131Q5VYM1 1079 aa9.42□□□□□ -0.9
SNX13-210ENST00000494402 PLEKHM2Q8IWE5 1019 aa9.42□□□□□ -0.9
SNX13-210ENST00000494402 C1orf216Q8TAB5 229 aa9.42□□□□□ -0.9
SNX13-210ENST00000494402 GPATCH3Q96I76 525 aa9.42□□□□□ -0.9
SNX13-210ENST00000494402 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
SNX13-210ENST00000494402 RAD51AP2Q09MP3 1159 aa9.41□□□□□ -0.9
SNX13-210ENST00000494402 MRPL58Q14197 206 aaKnown RBP9.41□□□□□ -0.9
SNX13-210ENST00000494402 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
SNX13-210ENST00000494402 DHX38Q92620 1227 aaKnown RBP9.41□□□□□ -0.9
SNX13-210ENST00000494402 KCNB2Q92953 911 aa9.41□□□□□ -0.9
SNX13-210ENST00000494402 TINF2Q9BSI4 451 aa9.41□□□□□ -0.9
SNX13-210ENST00000494402 H3BRB1 525 aa9.4□□□□□ -0.9
SNX13-210ENST00000494402 GTF2F1P35269 517 aaKnown RBP eCLIP9.4□□□□□ -0.9
SNX13-210ENST00000494402 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
SNX13-210ENST00000494402 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
SNX13-210ENST00000494402 DCTN4Q9UJW0 460 aa9.4□□□□□ -0.9
SNX13-210ENST00000494402 TBX22Q9Y458 520 aa9.4□□□□□ -0.9
SNX13-210ENST00000494402 SWI5Q1ZZU3 235 aa9.39□□□□□ -0.91
SNX13-210ENST00000494402 CRTC2Q53ET0 693 aaPredicted RBP9.39□□□□□ -0.91
SNX13-210ENST00000494402 LRRN4Q8WUT4 740 aa9.39□□□□□ -0.91
SNX13-210ENST00000494402 SLC52A1Q9NWF4 448 aa9.39□□□□□ -0.91
SNX13-210ENST00000494402 KLHL42Q9P2K6 505 aa9.39□□□□□ -0.91
SNX13-210ENST00000494402 PCDHGA4Q9Y5G9 962 aa9.39□□□□□ -0.91
SNX13-210ENST00000494402 USP17L5A8MUK1 530 aa9.38□□□□□ -0.91
SNX13-210ENST00000494402 ABL1P00519 1130 aa9.38□□□□□ -0.91
SNX13-210ENST00000494402 ANAPC15P60006 121 aa9.38□□□□□ -0.91
SNX13-210ENST00000494402 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
SNX13-210ENST00000494402 NT5DC4Q86YG4 428 aa9.38□□□□□ -0.91
SNX13-210ENST00000494402 GLYCTKQ8IVS8 523 aa9.38□□□□□ -0.91
SNX13-210ENST00000494402 TTC13Q8NBP0 860 aa9.38□□□□□ -0.91
SNX13-210ENST00000494402 MAGEC2Q9UBF1 373 aaPredicted RBP9.38□□□□□ -0.91
SNX13-210ENST00000494402 ICMTO60725 284 aa9.37□□□□□ -0.91
SNX13-210ENST00000494402 SKIP12755 728 aa9.37□□□□□ -0.91
SNX13-210ENST00000494402 ITGAEP38570 1179 aa9.37□□□□□ -0.91
SNX13-210ENST00000494402 PTK7Q13308 1070 aa9.37□□□□□ -0.91
SNX13-210ENST00000494402 DOK7Q18PE1 504 aa9.37□□□□□ -0.91
SNX13-210ENST00000494402 ZCRB1Q8TBF4 217 aaKnown RBP9.37□□□□□ -0.91
SNX13-210ENST00000494402 MORC4Q8TE76 937 aa9.37□□□□□ -0.91
SNX13-210ENST00000494402 BRINP2Q9C0B6 783 aa9.37□□□□□ -0.91
SNX13-210ENST00000494402 CCSER2Q9H7U1 834 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms