RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 CYP4X1Q8N118 509 aa4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 TTC24A2A3L6 582 aaPredicted RBP4.8□□□□□ -1.64
CDC42EP3-205ENST00000494083 NEUROD2Q15784 382 aa4.8□□□□□ -1.64
CDC42EP3-205ENST00000494083 AAASQ9NRG9 546 aa4.8□□□□□ -1.64
CDC42EP3-205ENST00000494083 F12P00748 615 aaPredicted RBP4.8□□□□□ -1.64
CDC42EP3-205ENST00000494083 BRPF1P55201 1214 aaPredicted RBP4.8□□□□□ -1.64
CDC42EP3-205ENST00000494083 SPDYE5A6NIY4 337 aa4.8□□□□□ -1.64
CDC42EP3-205ENST00000494083 CTDSPL2Q05D32 466 aa4.8□□□□□ -1.64
CDC42EP3-205ENST00000494083 HPS1Q92902 700 aa4.8□□□□□ -1.64
CDC42EP3-205ENST00000494083 GJA5P36382 358 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 DIXDC1Q155Q3 683 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 C4orf48Q5BLP8 95 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 DESI1Q6ICB0 168 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 LYPD8Q6UX82 237 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 LRRN4Q8WUT4 740 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 ALDH1A1P00352 501 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 KCNH2Q12809 1159 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 ZNF511Q8NB15 262 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 EHBP1Q8NDI1 1231 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 IL27Q8NEV9 243 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 FOXJ1Q92949 421 aa4.79□□□□□ -1.64
CDC42EP3-205ENST00000494083 PRPF38BQ5VTL8 546 aaKnown RBP4.78□□□□□ -1.64
CDC42EP3-205ENST00000494083 EPS8L1Q8TE68 723 aa4.78□□□□□ -1.64
CDC42EP3-205ENST00000494083 HMX1Q9NP08 348 aaPredicted RBP4.78□□□□□ -1.64
CDC42EP3-205ENST00000494083 SIAH2O43255 324 aa4.77□□□□□ -1.65
CDC42EP3-205ENST00000494083 WNT7BP56706 349 aa4.77□□□□□ -1.65
CDC42EP3-205ENST00000494083 BMP1P13497 986 aa4.77□□□□□ -1.65
CDC42EP3-205ENST00000494083 ATP1B4Q9UN42 357 aaPredicted RBP4.77□□□□□ -1.65
CDC42EP3-205ENST00000494083 DGAT1O75907 488 aa4.76□□□□□ -1.65
CDC42EP3-205ENST00000494083 SH3D19Q5HYK7 790 aa4.76□□□□□ -1.65
CDC42EP3-205ENST00000494083 DDRGK1Q96HY6 314 aa4.76□□□□□ -1.65
CDC42EP3-205ENST00000494083 SNIP1Q8TAD8 396 aaKnown RBP4.76□□□□□ -1.65
CDC42EP3-205ENST00000494083 GMPR2Q9P2T1 348 aaKnown RBP4.76□□□□□ -1.65
CDC42EP3-205ENST00000494083 AXIN1O15169 862 aa4.75□□□□□ -1.65
CDC42EP3-205ENST00000494083 AVPP01185 164 aa4.75□□□□□ -1.65
CDC42EP3-205ENST00000494083 SKIV2LQ15477 1246 aaKnown RBP4.75□□□□□ -1.65
CDC42EP3-205ENST00000494083 ZNF787Q6DD87 383 aa4.75□□□□□ -1.65
CDC42EP3-205ENST00000494083 HELBQ8NG08 1087 aaPredicted RBP4.75□□□□□ -1.65
CDC42EP3-205ENST00000494083 CARD14Q9BXL6 1004 aa4.75□□□□□ -1.65
CDC42EP3-205ENST00000494083 RSPH6AQ9H0K4 717 aa4.75□□□□□ -1.65
CDC42EP3-205ENST00000494083 MAGEB6P1A0A0J9YX57 407 aa4.74□□□□□ -1.65
CDC42EP3-205ENST00000494083 NR6A1Q15406 480 aa4.74□□□□□ -1.65
CDC42EP3-205ENST00000494083 AP1G2O75843 785 aa4.74□□□□□ -1.65
CDC42EP3-205ENST00000494083 ARID5BQ14865 1188 aa4.74□□□□□ -1.65
CDC42EP3-205ENST00000494083 NR3C2P08235 984 aa4.73□□□□□ -1.65
CDC42EP3-205ENST00000494083 AGERQ15109 404 aa4.73□□□□□ -1.65
CDC42EP3-205ENST00000494083 TUSC1Q2TAM9 212 aa4.73□□□□□ -1.65
CDC42EP3-205ENST00000494083 CRIPAKQ8N1N5 446 aa4.73□□□□□ -1.65
CDC42EP3-205ENST00000494083 ZNF775Q96BV0 537 aaPredicted RBP4.73□□□□□ -1.65
CDC42EP3-205ENST00000494083 OCSTAMPQ9BR26 566 aa4.72□□□□□ -1.65
CDC42EP3-205ENST00000494083 USP17L8P0C7I0 530 aa4.72□□□□□ -1.65
CDC42EP3-205ENST00000494083 RFC5P40937 340 aa4.72□□□□□ -1.65
CDC42EP3-205ENST00000494083 SH3RF1Q7Z6J0 888 aa4.72□□□□□ -1.65
CDC42EP3-205ENST00000494083 SNRPBP14678 240 aaKnown RBP4.72□□□□□ -1.65
CDC42EP3-205ENST00000494083 ATP13A2Q9NQ11 1180 aa4.72□□□□□ -1.65
CDC42EP3-205ENST00000494083 PPP2R2DQ66LE6 453 aa4.71□□□□□ -1.65
CDC42EP3-205ENST00000494083 NNTQ13423 1086 aa4.71□□□□□ -1.66
CDC42EP3-205ENST00000494083 WASF2Q9Y6W5 498 aa4.71□□□□□ -1.66
CDC42EP3-205ENST00000494083 SH3BP5LQ7L8J4 393 aa4.71□□□□□ -1.66
CDC42EP3-205ENST00000494083 ZFAND3Q9H8U3 227 aa4.71□□□□□ -1.66
CDC42EP3-205ENST00000494083 FSHRP23945 695 aa4.7□□□□□ -1.66
CDC42EP3-205ENST00000494083 GRM5P41594 1212 aa4.7□□□□□ -1.66
CDC42EP3-205ENST00000494083 TRIM46Q7Z4K8 759 aa4.7□□□□□ -1.66
CDC42EP3-205ENST00000494083 ITPKCQ96DU7 683 aa4.7□□□□□ -1.66
CDC42EP3-205ENST00000494083 C11orf95C9JLR9 678 aaPredicted RBP4.7□□□□□ -1.66
CDC42EP3-205ENST00000494083 VARSP26640 1264 aaKnown RBP4.7□□□□□ -1.66
CDC42EP3-205ENST00000494083 TRIM34Q9BYJ4 488 aa4.7□□□□□ -1.66
CDC42EP3-205ENST00000494083 ADH1CP00326 375 aa4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 SMCPP49901 116 aaPredicted RBP4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 CTC1Q2NKJ3 1217 aa4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 ERFEQ4G0M1 354 aa4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 TIMP2P16035 220 aa4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 KLF16Q9BXK1 252 aaPredicted RBP4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 CAPN5O15484 640 aaPredicted RBP4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 BPHLQ86WA6 291 aaPredicted RBP4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 FKBPLQ9UIM3 349 aa4.69□□□□□ -1.66
CDC42EP3-205ENST00000494083 SOBPA7XYQ1 873 aa4.68□□□□□ -1.66
CDC42EP3-205ENST00000494083 GPR37L1O60883 481 aa4.68□□□□□ -1.66
CDC42EP3-205ENST00000494083 WDR4P57081 412 aaKnown RBP4.68□□□□□ -1.66
CDC42EP3-205ENST00000494083 NBPF14Q5TI25 921 aa4.68□□□□□ -1.66
CDC42EP3-205ENST00000494083 C1QTNF2Q9BXJ5 285 aa4.68□□□□□ -1.66
CDC42EP3-205ENST00000494083 UNC13AQ9UPW8 1703 aa4.68□□□□□ -1.66
CDC42EP3-205ENST00000494083 NACADO15069 1562 aa4.67□□□□□ -1.66
CDC42EP3-205ENST00000494083 FAM174AQ8TBP5 190 aa4.67□□□□□ -1.66
CDC42EP3-205ENST00000494083 GJD4Q96KN9 370 aaPredicted RBP4.67□□□□□ -1.66
CDC42EP3-205ENST00000494083 ZFP42Q96MM3 310 aa4.67□□□□□ -1.66
CDC42EP3-205ENST00000494083 CDK15Q96Q40 435 aa4.67□□□□□ -1.66
CDC42EP3-205ENST00000494083 ZIC2O95409 532 aaPredicted RBP4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 PCMTD1Q96MG8 357 aaPredicted RBP4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 RAB15P59190 212 aa4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 VASH1Q7L8A9 365 aaPredicted RBP4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 ADAM32Q8TC27 787 aa4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 TRIM47Q96LD4 638 aa4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 VEGFBP49765 207 aa4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 MTMR14Q8NCE2 650 aa4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 PURBQ96QR8 312 aaKnown RBP4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 ARHGAP9Q9BRR9 750 aa4.66□□□□□ -1.66
CDC42EP3-205ENST00000494083 GOPCQ9HD26 462 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms