RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ANKRD26Q9UPS8 1709 aa15.51■□□□□ 0.07
MCF2L-231ENST00000494043 FYB1O15117 783 aa15.51■□□□□ 0.07
MCF2L-231ENST00000494043 TTC21AQ8NDW8 1320 aa15.5■□□□□ 0.07
MCF2L-231ENST00000494043 BRINP3Q76B58 766 aa15.5■□□□□ 0.07
MCF2L-231ENST00000494043 IQSEC2Q5JU85 1478 aa15.5■□□□□ 0.07
MCF2L-231ENST00000494043 MYBBP1AQ9BQG0 1328 aaKnown RBP15.49■□□□□ 0.07
MCF2L-231ENST00000494043 FOXO3O43524 673 aa15.49■□□□□ 0.07
MCF2L-231ENST00000494043 NME9Q86XW9 330 aa15.49■□□□□ 0.07
MCF2L-231ENST00000494043 GGNBP2Q9H3C7 697 aa15.49■□□□□ 0.07
MCF2L-231ENST00000494043 CCER2I3L3R5 266 aa15.48■□□□□ 0.07
MCF2L-231ENST00000494043 PSME1Q06323 249 aa15.48■□□□□ 0.07
MCF2L-231ENST00000494043 MORC1Q86VD1 984 aa15.48■□□□□ 0.07
MCF2L-231ENST00000494043 NPHP3Q7Z494 1330 aa15.47■□□□□ 0.07
MCF2L-231ENST00000494043 TRPM3Q9HCF6 1732 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-231ENST00000494043 PIK3C2AO00443 1686 aa15.47■□□□□ 0.07
MCF2L-231ENST00000494043 PXDNQ92626 1479 aa15.46■□□□□ 0.07
MCF2L-231ENST00000494043 OVOS2A0A0J9YW53 1432 aa15.46■□□□□ 0.07
MCF2L-231ENST00000494043 OVOS2Q6IE36 1432 aa15.46■□□□□ 0.07
MCF2L-231ENST00000494043 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
MCF2L-231ENST00000494043 USP54Q70EL1 1684 aa15.45■□□□□ 0.06
MCF2L-231ENST00000494043 XPCQ01831 940 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-231ENST00000494043 KRT28Q7Z3Y7 464 aa15.45■□□□□ 0.06
MCF2L-231ENST00000494043 ZRANB1Q9UGI0 708 aa15.45■□□□□ 0.06
MCF2L-231ENST00000494043 NHSL1Q5SYE7 1610 aa15.44■□□□□ 0.06
MCF2L-231ENST00000494043 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-231ENST00000494043 PPP2R1AP30153 589 aa15.44■□□□□ 0.06
MCF2L-231ENST00000494043 NLRP13Q86W25 1043 aa15.44■□□□□ 0.06
MCF2L-231ENST00000494043 COG3Q96JB2 828 aa15.44■□□□□ 0.06
MCF2L-231ENST00000494043 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
MCF2L-231ENST00000494043 CERKQ8TCT0 537 aa15.43■□□□□ 0.06
MCF2L-231ENST00000494043 DDX17Q92841 729 aaKnown RBP15.43■□□□□ 0.06
MCF2L-231ENST00000494043 SBNO1A3KN83 1393 aa15.43■□□□□ 0.06
MCF2L-231ENST00000494043 ROBO1Q9Y6N7 1651 aa15.43■□□□□ 0.06
MCF2L-231ENST00000494043 TOM1O60784 492 aa15.42■□□□□ 0.06
MCF2L-231ENST00000494043 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
MCF2L-231ENST00000494043 ALS2Q96Q42 1657 aa15.41■□□□□ 0.06
MCF2L-231ENST00000494043 MARF1Q9Y4F3 1742 aaKnown RBP15.41■□□□□ 0.06
MCF2L-231ENST00000494043 TNNT2P45379 298 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-231ENST00000494043 CCDC184Q52MB2 194 aa15.41■□□□□ 0.06
MCF2L-231ENST00000494043 ABTB2Q8N961 1025 aa15.41■□□□□ 0.06
MCF2L-231ENST00000494043 SOS2Q07890 1332 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-231ENST00000494043 AHDC1Q5TGY3 1603 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-231ENST00000494043 AATKQ6ZMQ8 1374 aa15.4■□□□□ 0.06
MCF2L-231ENST00000494043 NLRP6P59044 892 aa15.4■□□□□ 0.06
MCF2L-231ENST00000494043 MRS2Q9HD23 443 aa15.4■□□□□ 0.06
MCF2L-231ENST00000494043 UBAP1LF5GYI3 381 aa15.38■□□□□ 0.05
MCF2L-231ENST00000494043 NUTM2GQ5VZR2 741 aa15.38■□□□□ 0.05
MCF2L-231ENST00000494043 SPATA31A3Q5VYP0 1347 aa15.38■□□□□ 0.05
MCF2L-231ENST00000494043 ARHGEF10O15013 1369 aa15.37■□□□□ 0.05
MCF2L-231ENST00000494043 SMG6Q86US8 1419 aaKnown RBP15.37■□□□□ 0.05
MCF2L-231ENST00000494043 USP19O94966 1318 aa15.37■□□□□ 0.05
MCF2L-231ENST00000494043 SLIT3O75094 1523 aa15.37■□□□□ 0.05
MCF2L-231ENST00000494043 MED1Q15648 1581 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-231ENST00000494043 LMOD2Q6P5Q4 547 aa15.36■□□□□ 0.05
MCF2L-231ENST00000494043 NFAT5O94916 1531 aa15.35■□□□□ 0.05
MCF2L-231ENST00000494043 MTHFSP49914 203 aa15.35■□□□□ 0.05
MCF2L-231ENST00000494043 FBLN1P23142 703 aa15.34■□□□□ 0.05
MCF2L-231ENST00000494043 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
MCF2L-231ENST00000494043 POLKQ9UBT6 870 aa15.34■□□□□ 0.05
MCF2L-231ENST00000494043 CDK12Q9NYV4 1490 aaPredicted RBP15.33■□□□□ 0.05
MCF2L-231ENST00000494043 SOX12O15370 315 aa15.33■□□□□ 0.04
MCF2L-231ENST00000494043 COL3A1P02461 1466 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-231ENST00000494043 COL16A1Q07092 1604 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-231ENST00000494043 RRS1Q15050 365 aaKnown RBP15.32■□□□□ 0.04
MCF2L-231ENST00000494043 KCNH5Q8NCM2 988 aa15.32■□□□□ 0.04
MCF2L-231ENST00000494043 CFAP53Q96M91 514 aa15.32■□□□□ 0.04
MCF2L-231ENST00000494043 EMILIN1Q9Y6C2 1016 aa15.32■□□□□ 0.04
MCF2L-231ENST00000494043 INSRP06213 1382 aa15.32■□□□□ 0.04
MCF2L-231ENST00000494043 PNPLA6Q8IY17 1366 aa15.32■□□□□ 0.04
MCF2L-231ENST00000494043 PHRF1Q9P1Y6 1649 aaKnown RBP15.32■□□□□ 0.04
MCF2L-231ENST00000494043 PHLPP1O60346 1717 aa15.31■□□□□ 0.04
MCF2L-231ENST00000494043 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
MCF2L-231ENST00000494043 MAP2P11137 1827 aaKnown RBP15.31■□□□□ 0.04
MCF2L-231ENST00000494043 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
MCF2L-231ENST00000494043 GCP02774 474 aa15.3■□□□□ 0.04
MCF2L-231ENST00000494043 MAP3K19Q56UN5 1328 aa15.3■□□□□ 0.04
MCF2L-231ENST00000494043 PEAK1Q9H792 1746 aa15.3■□□□□ 0.04
MCF2L-231ENST00000494043 RTL1A6NKG5 1358 aa15.29■□□□□ 0.04
MCF2L-231ENST00000494043 KIF24Q5T7B8 1368 aa15.29■□□□□ 0.04
MCF2L-231ENST00000494043 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-231ENST00000494043 LRRC59Q96AG4 307 aaKnown RBP15.29■□□□□ 0.04
MCF2L-231ENST00000494043 SHPRHQ149N8 1683 aa15.28■□□□□ 0.04
MCF2L-231ENST00000494043 FLT4P35916 1363 aa15.28■□□□□ 0.04
MCF2L-231ENST00000494043 ABCA3Q99758 1704 aa15.28■□□□□ 0.04
MCF2L-231ENST00000494043 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-231ENST00000494043 PLEKHG5O94827 1062 aa15.27■□□□□ 0.04
MCF2L-231ENST00000494043 FAM9BQ8IZU0 186 aa15.27■□□□□ 0.04
MCF2L-231ENST00000494043 LTN1O94822 1766 aa15.26■□□□□ 0.03
MCF2L-231ENST00000494043 AMPHP49418 695 aa15.26■□□□□ 0.03
MCF2L-231ENST00000494043 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
MCF2L-231ENST00000494043 CABLES1Q8TDN4 633 aa15.26■□□□□ 0.03
MCF2L-231ENST00000494043 DIAPH1O60610 1272 aaKnown RBP15.25■□□□□ 0.03
MCF2L-231ENST00000494043 ARHGEF25Q86VW2 580 aa15.25■□□□□ 0.03
MCF2L-231ENST00000494043 CPDO75976 1380 aa15.24■□□□□ 0.03
MCF2L-231ENST00000494043 HOXC9P31274 260 aa15.24■□□□□ 0.03
MCF2L-231ENST00000494043 ABCC6O95255 1503 aa15.23■□□□□ 0.03
MCF2L-231ENST00000494043 HSP90AB2PQ58FF8 381 aa15.23■□□□□ 0.03
MCF2L-231ENST00000494043 IP6K1Q92551 441 aa15.23■□□□□ 0.03
MCF2L-231ENST00000494043 NUDCQ9Y266 331 aa15.23■□□□□ 0.03
MCF2L-231ENST00000494043 ZBTB7CA1YPR0 619 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms