RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 QRICH2Q9H0J4 1663 aa34.11■■■■□ 3.05
RHBDD3-206ENST00000493894 POLR3AO14802 1390 aaPredicted RBP34.11■■■■□ 3.05
RHBDD3-206ENST00000493894 NRAPQ86VF7 1730 aa34.1■■■■□ 3.05
RHBDD3-206ENST00000493894 CCDC61Q9Y6R9 512 aa34.1■■■■□ 3.05
RHBDD3-206ENST00000493894 SIN3AQ96ST3 1273 aa34.09■■■■□ 3.05
RHBDD3-206ENST00000493894 CCDC9Q9Y3X0 531 aaKnown RBP34.09■■■■□ 3.05
RHBDD3-206ENST00000493894 TRPM1Q7Z4N2 1603 aa34.08■■■■□ 3.05
RHBDD3-206ENST00000493894 EP400Q96L91 3159 aa34.06■■■■□ 3.04
RHBDD3-206ENST00000493894 ACEP12821 1306 aa34.05■■■■□ 3.04
RHBDD3-206ENST00000493894 SRPK2P78362 688 aaKnown RBP34.05■■■■□ 3.04
RHBDD3-206ENST00000493894 PHRF1Q9P1Y6 1649 aaKnown RBP34.04■■■■□ 3.04
RHBDD3-206ENST00000493894 NEUROD1Q13562 356 aa34.04■■■■□ 3.04
RHBDD3-206ENST00000493894 BTG4Q9NY30 223 aa34.04■■■■□ 3.04
RHBDD3-206ENST00000493894 BRWD3Q6RI45 1802 aa34.03■■■■□ 3.04
RHBDD3-206ENST00000493894 PLEKHG3A1L390 1219 aa34.03■■■■□ 3.04
RHBDD3-206ENST00000493894 PPIP5K1Q6PFW1 1433 aa34.02■■■■□ 3.04
RHBDD3-206ENST00000493894 NBPF8Q3BBV2 869 aa34.01■■■■□ 3.03
RHBDD3-206ENST00000493894 CCDC125Q86Z20 511 aa34.01■■■■□ 3.03
RHBDD3-206ENST00000493894 SEPT12Q8IYM1 358 aa34.01■■■■□ 3.03
RHBDD3-206ENST00000493894 PRDM11Q9NQV5 511 aa34■■■■□ 3.03
RHBDD3-206ENST00000493894 ROCK2O75116 1388 aaKnown RBP33.98■■■■□ 3.03
RHBDD3-206ENST00000493894 ONECUT3O60422 494 aaPredicted RBP33.97■■■■□ 3.03
RHBDD3-206ENST00000493894 CABP2Q9NPB3 220 aa33.97■■■■□ 3.03
RHBDD3-206ENST00000493894 KIAA0232Q92628 1395 aa33.95■■■■□ 3.02
RHBDD3-206ENST00000493894 A0A0G2JS52 829 aa33.94■■■■□ 3.02
RHBDD3-206ENST00000493894 MYT1Q01538 1121 aa33.94■■■■□ 3.02
RHBDD3-206ENST00000493894 NUTM2GQ5VZR2 741 aa33.94■■■■□ 3.02
RHBDD3-206ENST00000493894 BLMP54132 1417 aaPredicted RBP33.94■■■■□ 3.02
RHBDD3-206ENST00000493894 NRKQ7Z2Y5 1582 aa33.93■■■■□ 3.02
RHBDD3-206ENST00000493894 ABTB2Q8N961 1025 aa33.91■■■■□ 3.02
RHBDD3-206ENST00000493894 EVC2Q86UK5 1308 aa33.9■■■■□ 3.02
RHBDD3-206ENST00000493894 FAM98CQ17RN3 349 aaKnown RBP33.9■■■■□ 3.02
RHBDD3-206ENST00000493894 KRT27Q7Z3Y8 459 aa33.9■■■■□ 3.02
RHBDD3-206ENST00000493894 BRD4O60885 1362 aaPredicted RBP33.89■■■■□ 3.02
RHBDD3-206ENST00000493894 SPATA31A5Q5VU36 1347 aa33.88■■■■□ 3.01
RHBDD3-206ENST00000493894 SPATA31A7Q8IWB4 1347 aa33.88■■■■□ 3.01
RHBDD3-206ENST00000493894 ZC3H6P61129 1189 aaKnown RBP33.87■■■■□ 3.01
RHBDD3-206ENST00000493894 CHRNA2Q15822 529 aa33.87■■■■□ 3.01
RHBDD3-206ENST00000493894 USP19O94966 1318 aa33.86■■■■□ 3.01
RHBDD3-206ENST00000493894 CABP1Q9NZU7 370 aa33.85■■■■□ 3.01
RHBDD3-206ENST00000493894 USP6P35125 1406 aa33.85■■■■□ 3.01
RHBDD3-206ENST00000493894 THSD7AQ9UPZ6 1657 aa33.84■■■■□ 3.01
RHBDD3-206ENST00000493894 NLRP13Q86W25 1043 aa33.83■■■■□ 3.01
RHBDD3-206ENST00000493894 SF3B2Q13435 895 aaKnown RBP33.82■■■■□ 3
RHBDD3-206ENST00000493894 CPDO75976 1380 aa33.82■■■■□ 3
RHBDD3-206ENST00000493894 STRN4Q9NRL3 753 aa33.81■■■■□ 3
RHBDD3-206ENST00000493894 TONSLQ96HA7 1378 aa33.8■■■■□ 3
RHBDD3-206ENST00000493894 ZRANB1Q9UGI0 708 aa33.79■■■■□ 3
RHBDD3-206ENST00000493894 SPATA31A1Q5TZJ5 1347 aa33.79■■■■□ 3
RHBDD3-206ENST00000493894 LMO7Q8WWI1 1683 aa33.78■■■■□ 3
RHBDD3-206ENST00000493894 SSH2Q76I76 1423 aa33.77■■■■□ 3
RHBDD3-206ENST00000493894 CAMTA1Q9Y6Y1 1673 aa33.75■■■□□ 2.99
RHBDD3-206ENST00000493894 GCP02774 474 aa33.75■■■□□ 2.99
RHBDD3-206ENST00000493894 PIK3C2AO00443 1686 aa33.74■■■□□ 2.99
RHBDD3-206ENST00000493894 SLIT3O75094 1523 aa33.74■■■□□ 2.99
RHBDD3-206ENST00000493894 SBNO2Q9Y2G9 1366 aa33.73■■■□□ 2.99
RHBDD3-206ENST00000493894 EVA1CP58658 441 aa33.73■■■□□ 2.99
RHBDD3-206ENST00000493894 DEFB132Q7Z7B7 95 aa33.73■■■□□ 2.99
RHBDD3-206ENST00000493894 NLRP6P59044 892 aa33.72■■■□□ 2.99
RHBDD3-206ENST00000493894 CARD11Q9BXL7 1154 aa33.72■■■□□ 2.99
RHBDD3-206ENST00000493894 AKAP12Q02952 1782 aa33.72■■■□□ 2.99
RHBDD3-206ENST00000493894 TRIM26Q12899 539 aaPredicted RBP33.7■■■□□ 2.99
RHBDD3-206ENST00000493894 RGPD1P0DJD0 1748 aa33.68■■■□□ 2.98
RHBDD3-206ENST00000493894 ZNF692Q9BU19 519 aaPredicted RBP33.68■■■□□ 2.98
RHBDD3-206ENST00000493894 USP35Q9P2H5 1018 aa33.68■■■□□ 2.98
RHBDD3-206ENST00000493894 COL5A2P05997 1499 aaPredicted RBP33.66■■■□□ 2.98
RHBDD3-206ENST00000493894 LARP1Q6PKG0 1096 aaKnown RBP33.66■■■□□ 2.98
RHBDD3-206ENST00000493894 BAG6P46379 1132 aa33.65■■■□□ 2.98
RHBDD3-206ENST00000493894 FAM182BQ5T319 152 aa33.65■■■□□ 2.98
RHBDD3-206ENST00000493894 BARGINQ6ZT62 677 aa33.64■■■□□ 2.98
RHBDD3-206ENST00000493894 CPSF1Q10570 1443 aaKnown RBP33.63■■■□□ 2.97
RHBDD3-206ENST00000493894 TTC21BQ7Z4L5 1316 aa33.63■■■□□ 2.97
RHBDD3-206ENST00000493894 ZBTB7CA1YPR0 619 aa33.63■■■□□ 2.97
RHBDD3-206ENST00000493894 TTC21AQ8NDW8 1320 aa33.62■■■□□ 2.97
RHBDD3-206ENST00000493894 AATKQ6ZMQ8 1374 aa33.61■■■□□ 2.97
RHBDD3-206ENST00000493894 KTN1Q86UP2 1357 aaKnown RBP33.61■■■□□ 2.97
RHBDD3-206ENST00000493894 TCP11L2Q8N4U5 519 aa33.61■■■□□ 2.97
RHBDD3-206ENST00000493894 MON2Q7Z3U7 1717 aa33.61■■■□□ 2.97
RHBDD3-206ENST00000493894 TNS1Q9HBL0 1735 aaKnown RBP33.59■■■□□ 2.97
RHBDD3-206ENST00000493894 THRAP3Q9Y2W1 955 aaKnown RBP33.58■■■□□ 2.97
RHBDD3-206ENST00000493894 CRB1P82279 1406 aa33.58■■■□□ 2.97
RHBDD3-206ENST00000493894 KCNH5Q8NCM2 988 aa33.56■■■□□ 2.96
RHBDD3-206ENST00000493894 FAM196AQ6ZSG2 479 aa33.55■■■□□ 2.96
RHBDD3-206ENST00000493894 PDE3BQ13370 1112 aa33.54■■■□□ 2.96
RHBDD3-206ENST00000493894 COL18A1P39060 1754 aa33.54■■■□□ 2.96
RHBDD3-206ENST00000493894 DISP2A7MBM2 1401 aa33.53■■■□□ 2.96
RHBDD3-206ENST00000493894 PARP4Q9UKK3 1724 aaKnown RBP33.53■■■□□ 2.96
RHBDD3-206ENST00000493894 SRCAPQ6ZRS2 3230 aa33.51■■■□□ 2.96
RHBDD3-206ENST00000493894 CD163L1Q9NR16 1453 aa33.51■■■□□ 2.96
RHBDD3-206ENST00000493894 NFAT5O94916 1531 aa33.5■■■□□ 2.95
RHBDD3-206ENST00000493894 SOX12O15370 315 aa33.5■■■□□ 2.95
RHBDD3-206ENST00000493894 EN1Q05925 392 aaPredicted RBP33.49■■■□□ 2.95
RHBDD3-206ENST00000493894 TMC1Q8TDI8 760 aa33.49■■■□□ 2.95
RHBDD3-206ENST00000493894 ARHGEF25Q86VW2 580 aa33.48■■■□□ 2.95
RHBDD3-206ENST00000493894 TRIM37O94972 964 aa33.47■■■□□ 2.95
RHBDD3-206ENST00000493894 USP54Q70EL1 1684 aa33.47■■■□□ 2.95
RHBDD3-206ENST00000493894 TOM1L2Q6ZVM7 507 aa33.46■■■□□ 2.95
RHBDD3-206ENST00000493894 HDGFL2Q7Z4V5 671 aaPredicted RBP33.46■■■□□ 2.95
RHBDD3-206ENST00000493894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.46■■■□□ 2.95
RHBDD3-206ENST00000493894 WDR17Q8IZU2 1322 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms