RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 NGDNQ8NEJ9 315 aaKnown RBP25.49■■□□□ 1.67
NECTIN3-211ENST00000493615 AKAP12Q02952 1782 aa25.49■■□□□ 1.67
NECTIN3-211ENST00000493615 ITSN1Q15811 1721 aa25.49■■□□□ 1.67
NECTIN3-211ENST00000493615 MON2Q7Z3U7 1717 aa25.48■■□□□ 1.67
NECTIN3-211ENST00000493615 USP6P35125 1406 aa25.48■■□□□ 1.67
NECTIN3-211ENST00000493615 SCAF1Q9H7N4 1312 aaKnown RBP25.48■■□□□ 1.67
NECTIN3-211ENST00000493615 FAM9BQ8IZU0 186 aa25.48■■□□□ 1.67
NECTIN3-211ENST00000493615 MST1RQ04912 1400 aa25.47■■□□□ 1.67
NECTIN3-211ENST00000493615 NME9Q86XW9 330 aa25.47■■□□□ 1.67
NECTIN3-211ENST00000493615 ESCO1Q5FWF5 840 aa25.47■■□□□ 1.67
NECTIN3-211ENST00000493615 PNISRQ8TF01 805 aaKnown RBP25.47■■□□□ 1.67
NECTIN3-211ENST00000493615 PHF8Q9UPP1 1060 aa25.47■■□□□ 1.67
NECTIN3-211ENST00000493615 ORAI2Q96SN7 254 aa25.46■■□□□ 1.67
NECTIN3-211ENST00000493615 ZRANB1Q9UGI0 708 aa25.46■■□□□ 1.67
NECTIN3-211ENST00000493615 TTC21BQ7Z4L5 1316 aa25.45■■□□□ 1.67
NECTIN3-211ENST00000493615 SSH2Q76I76 1423 aa25.45■■□□□ 1.66
NECTIN3-211ENST00000493615 C1orf167Q5SNV9 1468 aa25.45■■□□□ 1.66
NECTIN3-211ENST00000493615 NRKQ7Z2Y5 1582 aa25.42■■□□□ 1.66
NECTIN3-211ENST00000493615 KIF20BQ96Q89 1820 aa25.41■■□□□ 1.66
NECTIN3-211ENST00000493615 BRINP3Q76B58 766 aa25.38■■□□□ 1.65
NECTIN3-211ENST00000493615 ROBO1Q9Y6N7 1651 aa25.37■■□□□ 1.65
NECTIN3-211ENST00000493615 ANKRD26Q9UPS8 1709 aa25.37■■□□□ 1.65
NECTIN3-211ENST00000493615 FBLN1P23142 703 aa25.37■■□□□ 1.65
NECTIN3-211ENST00000493615 MTHFSP49914 203 aa25.37■■□□□ 1.65
NECTIN3-211ENST00000493615 FOXO3O43524 673 aa25.36■■□□□ 1.65
NECTIN3-211ENST00000493615 DDX17Q92841 729 aaKnown RBP25.35■■□□□ 1.65
NECTIN3-211ENST00000493615 COG3Q96JB2 828 aa25.35■■□□□ 1.65
NECTIN3-211ENST00000493615 TTC21AQ8NDW8 1320 aa25.35■■□□□ 1.65
NECTIN3-211ENST00000493615 PSME1Q06323 249 aa25.33■■□□□ 1.65
NECTIN3-211ENST00000493615 XPCQ01831 940 aaPredicted RBP25.32■■□□□ 1.64
NECTIN3-211ENST00000493615 OVOS2A0A0J9YW53 1432 aa25.31■■□□□ 1.64
NECTIN3-211ENST00000493615 OVOS2Q6IE36 1432 aa25.31■■□□□ 1.64
NECTIN3-211ENST00000493615 FBXO41Q8TF61 875 aa25.31■■□□□ 1.64
NECTIN3-211ENST00000493615 PAK3O75914 559 aaPredicted RBP25.3■■□□□ 1.64
NECTIN3-211ENST00000493615 HNRNPUQ00839 825 aaKnown RBP eCLIP25.29■■□□□ 1.64
NECTIN3-211ENST00000493615 POLKQ9UBT6 870 aa25.28■■□□□ 1.64
NECTIN3-211ENST00000493615 NUTM2GQ5VZR2 741 aa25.28■■□□□ 1.64
NECTIN3-211ENST00000493615 USP31Q70CQ4 1352 aa25.27■■□□□ 1.64
NECTIN3-211ENST00000493615 ABTB2Q8N961 1025 aa25.27■■□□□ 1.64
NECTIN3-211ENST00000493615 ADAMTS8Q9UP79 889 aa25.27■■□□□ 1.64
NECTIN3-211ENST00000493615 PIK3C2AO00443 1686 aa25.26■■□□□ 1.63
NECTIN3-211ENST00000493615 KIF1AQ12756 1690 aa25.26■■□□□ 1.63
NECTIN3-211ENST00000493615 NLRP6P59044 892 aa25.26■■□□□ 1.63
NECTIN3-211ENST00000493615 KRT28Q7Z3Y7 464 aa25.26■■□□□ 1.63
NECTIN3-211ENST00000493615 AATKQ6ZMQ8 1374 aa25.25■■□□□ 1.63
NECTIN3-211ENST00000493615 EMILIN1Q9Y6C2 1016 aa25.25■■□□□ 1.63
NECTIN3-211ENST00000493615 RRS1Q15050 365 aaKnown RBP25.24■■□□□ 1.63
NECTIN3-211ENST00000493615 WDR43Q15061 677 aaKnown RBP eCLIP25.23■■□□□ 1.63
NECTIN3-211ENST00000493615 CFAP53Q96M91 514 aa25.23■■□□□ 1.63
NECTIN3-211ENST00000493615 NPHP3Q7Z494 1330 aa25.22■■□□□ 1.63
NECTIN3-211ENST00000493615 SENP3-EIF4A1A0A087X0R7 540 aa25.22■■□□□ 1.63
NECTIN3-211ENST00000493615 PPM1GO15355 546 aaPredicted RBP25.22■■□□□ 1.63
NECTIN3-211ENST00000493615 NHSL1Q5SYE7 1610 aa25.22■■□□□ 1.63
NECTIN3-211ENST00000493615 SOX12O15370 315 aa25.21■■□□□ 1.63
NECTIN3-211ENST00000493615 CENPBP07199 599 aaPredicted RBP25.21■■□□□ 1.63
NECTIN3-211ENST00000493615 HSPA1LP34931 641 aa25.21■■□□□ 1.63
NECTIN3-211ENST00000493615 PHLPP1O60346 1717 aa25.21■■□□□ 1.63
NECTIN3-211ENST00000493615 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
NECTIN3-211ENST00000493615 COL3A1P02461 1466 aaPredicted RBP25.19■■□□□ 1.62
NECTIN3-211ENST00000493615 MAP2P11137 1827 aaKnown RBP25.18■■□□□ 1.62
NECTIN3-211ENST00000493615 AHDC1Q5TGY3 1603 aaPredicted RBP25.18■■□□□ 1.62
NECTIN3-211ENST00000493615 SMG6Q86US8 1419 aaKnown RBP25.18■■□□□ 1.62
NECTIN3-211ENST00000493615 SHPRHQ149N8 1683 aa25.17■■□□□ 1.62
NECTIN3-211ENST00000493615 TRPM3Q9HCF6 1732 aaPredicted RBP25.17■■□□□ 1.62
NECTIN3-211ENST00000493615 MARF1Q9Y4F3 1742 aaKnown RBP25.17■■□□□ 1.62
NECTIN3-211ENST00000493615 SOS2Q07890 1332 aaPredicted RBP25.17■■□□□ 1.62
NECTIN3-211ENST00000493615 INSRP06213 1382 aa25.17■■□□□ 1.62
NECTIN3-211ENST00000493615 BLMP54132 1417 aaPredicted RBP25.16■■□□□ 1.62
NECTIN3-211ENST00000493615 PXDNQ92626 1479 aa25.16■■□□□ 1.62
NECTIN3-211ENST00000493615 LMOD2Q6P5Q4 547 aa25.15■■□□□ 1.62
NECTIN3-211ENST00000493615 USP54Q70EL1 1684 aa25.14■■□□□ 1.61
NECTIN3-211ENST00000493615 MAP3K19Q56UN5 1328 aa25.13■■□□□ 1.61
NECTIN3-211ENST00000493615 COL16A1Q07092 1604 aaPredicted RBP25.13■■□□□ 1.61
NECTIN3-211ENST00000493615 DIAPH1O60610 1272 aaKnown RBP25.13■■□□□ 1.61
NECTIN3-211ENST00000493615 CDK12Q9NYV4 1490 aaPredicted RBP25.12■■□□□ 1.61
NECTIN3-211ENST00000493615 CCDC146Q8IYE0 955 aa25.11■■□□□ 1.61
NECTIN3-211ENST00000493615 SBNO1A3KN83 1393 aa25.11■■□□□ 1.61
NECTIN3-211ENST00000493615 ZBED9Q6R2W3 1325 aa25.11■■□□□ 1.61
NECTIN3-211ENST00000493615 ILDR1Q86SU0 546 aaPredicted RBP25.11■■□□□ 1.61
NECTIN3-211ENST00000493615 LRRC59Q96AG4 307 aaKnown RBP25.11■■□□□ 1.61
NECTIN3-211ENST00000493615 PLEKHG5O94827 1062 aa25.1■■□□□ 1.61
NECTIN3-211ENST00000493615 U2SURPO15042 1029 aaKnown RBP25.09■■□□□ 1.61
NECTIN3-211ENST00000493615 U2AF1L5P0DN76 240 aaPredicted RBP25.09■■□□□ 1.61
NECTIN3-211ENST00000493615 U2AF1Q01081 240 aaKnown RBP eCLIP25.09■■□□□ 1.61
NECTIN3-211ENST00000493615 NUDCQ9Y266 331 aa25.09■■□□□ 1.61
NECTIN3-211ENST00000493615 SPATA31A3Q5VYP0 1347 aa25.08■■□□□ 1.61
NECTIN3-211ENST00000493615 PEAK1Q9H792 1746 aa25.08■■□□□ 1.61
NECTIN3-211ENST00000493615 IL13P35225 146 aa25.08■■□□□ 1.61
NECTIN3-211ENST00000493615 HSP90AB2PQ58FF8 381 aa25.08■■□□□ 1.61
NECTIN3-211ENST00000493615 ALS2Q96Q42 1657 aa25.07■■□□□ 1.6
NECTIN3-211ENST00000493615 USP19O94966 1318 aa25.07■■□□□ 1.6
NECTIN3-211ENST00000493615 SALL2Q9Y467 1007 aaPredicted RBP25.06■■□□□ 1.6
NECTIN3-211ENST00000493615 GCP02774 474 aa25.06■■□□□ 1.6
NECTIN3-211ENST00000493615 TNS3Q68CZ2 1445 aa25.05■■□□□ 1.6
NECTIN3-211ENST00000493615 NFAT5O94916 1531 aa25.05■■□□□ 1.6
NECTIN3-211ENST00000493615 KCNH5Q8NCM2 988 aa25.04■■□□□ 1.6
NECTIN3-211ENST00000493615 AMPHP49418 695 aa25.04■■□□□ 1.6
NECTIN3-211ENST00000493615 SLIT3O75094 1523 aa25.03■■□□□ 1.6
NECTIN3-211ENST00000493615 EIF4A2Q14240 407 aaKnown RBP25.03■■□□□ 1.6
NECTIN3-211ENST00000493615 FLT4P35916 1363 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms