RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 FAM135AQ9P2D6 1515 aa14.01□□□□□ -0.17
PRPF3-206ENST00000493553 THSD4Q6ZMP0 1018 aa14.01□□□□□ -0.17
PRPF3-206ENST00000493553 FAM198AQ9UFP1 575 aa14.01□□□□□ -0.17
PRPF3-206ENST00000493553 ADGRL1O94910 1474 aa14□□□□□ -0.17
PRPF3-206ENST00000493553 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
PRPF3-206ENST00000493553 KANK1Q14678 1352 aa14□□□□□ -0.17
PRPF3-206ENST00000493553 FAM98CQ17RN3 349 aaKnown RBP14□□□□□ -0.17
PRPF3-206ENST00000493553 SMYD5Q6GMV2 418 aa14□□□□□ -0.17
PRPF3-206ENST00000493553 SEPT9Q9UHD8 586 aaPredicted RBP14□□□□□ -0.17
PRPF3-206ENST00000493553 ATP10AO60312 1499 aa13.99□□□□□ -0.17
PRPF3-206ENST00000493553 TRAPPC8Q9Y2L5 1435 aa13.99□□□□□ -0.17
PRPF3-206ENST00000493553 TTC13Q8NBP0 860 aa13.99□□□□□ -0.17
PRPF3-206ENST00000493553 ANKK1Q8NFD2 765 aa13.99□□□□□ -0.17
PRPF3-206ENST00000493553 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
PRPF3-206ENST00000493553 ZFRQ96KR1 1074 aaKnown RBP13.98□□□□□ -0.17
PRPF3-206ENST00000493553 CCDC144AA2RUR9 1427 aa13.98□□□□□ -0.17
PRPF3-206ENST00000493553 UHRF1BP1Q6BDS2 1440 aa13.98□□□□□ -0.17
PRPF3-206ENST00000493553 CD109Q6YHK3 1445 aa13.98□□□□□ -0.17
PRPF3-206ENST00000493553 ARID4BQ4LE39 1312 aaPredicted RBP13.97□□□□□ -0.17
PRPF3-206ENST00000493553 NBPF26B4DH59 902 aa13.97□□□□□ -0.17
PRPF3-206ENST00000493553 PTGDRQ13258 359 aa13.97□□□□□ -0.17
PRPF3-206ENST00000493553 ZNF518AQ6AHZ1 1483 aa13.97□□□□□ -0.17
PRPF3-206ENST00000493553 IQGAP3Q86VI3 1631 aa13.97□□□□□ -0.17
PRPF3-206ENST00000493553 NEO1Q92859 1461 aa13.96□□□□□ -0.17
PRPF3-206ENST00000493553 DHX29Q7Z478 1369 aaKnown RBP13.96□□□□□ -0.18
PRPF3-206ENST00000493553 ZFYVE16Q7Z3T8 1539 aa13.95□□□□□ -0.18
PRPF3-206ENST00000493553 ANP32CO43423 234 aa13.95□□□□□ -0.18
PRPF3-206ENST00000493553 PADI6Q6TGC4 694 aa13.95□□□□□ -0.18
PRPF3-206ENST00000493553 ATP7AQ04656 1500 aa13.95□□□□□ -0.18
PRPF3-206ENST00000493553 NUTM2FA1L443 756 aa13.94□□□□□ -0.18
PRPF3-206ENST00000493553 CCER2I3L3R5 266 aa13.94□□□□□ -0.18
PRPF3-206ENST00000493553 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
PRPF3-206ENST00000493553 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
PRPF3-206ENST00000493553 AFAP1Q8N556 730 aa13.94□□□□□ -0.18
PRPF3-206ENST00000493553 TATDN2Q93075 761 aa13.93□□□□□ -0.18
PRPF3-206ENST00000493553 SOWAHBA6NEL2 793 aa13.92□□□□□ -0.18
PRPF3-206ENST00000493553 PTPN5P54829 565 aa13.92□□□□□ -0.18
PRPF3-206ENST00000493553 PNMA3Q9UL41 463 aa13.92□□□□□ -0.18
PRPF3-206ENST00000493553 INO80Q9ULG1 1556 aaPredicted RBP13.92□□□□□ -0.18
PRPF3-206ENST00000493553 EIF2AK4Q9P2K8 1649 aaKnown RBP13.91□□□□□ -0.18
PRPF3-206ENST00000493553 C3orf80F5H4A9 247 aa13.91□□□□□ -0.18
PRPF3-206ENST00000493553 MLH3Q9UHC1 1453 aa13.91□□□□□ -0.18
PRPF3-206ENST00000493553 SMAPO00193 183 aa13.9□□□□□ -0.18
PRPF3-206ENST00000493553 FCHSD2O94868 740 aa13.9□□□□□ -0.18
PRPF3-206ENST00000493553 RBM26Q5T8P6 1007 aaKnown RBP13.9□□□□□ -0.18
PRPF3-206ENST00000493553 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
PRPF3-206ENST00000493553 NBPF8Q3BBV2 869 aa13.89□□□□□ -0.19
PRPF3-206ENST00000493553 NUDT18Q6ZVK8 323 aa13.89□□□□□ -0.19
PRPF3-206ENST00000493553 POGZQ7Z3K3 1410 aa13.89□□□□□ -0.19
PRPF3-206ENST00000493553 BCAMP50895 628 aa13.88□□□□□ -0.19
PRPF3-206ENST00000493553 SPATA31E1Q6ZUB1 1445 aa13.88□□□□□ -0.19
PRPF3-206ENST00000493553 GLI2P10070 1586 aa13.88□□□□□ -0.19
PRPF3-206ENST00000493553 LRCH3Q96II8 777 aa13.87□□□□□ -0.19
PRPF3-206ENST00000493553 DEPDC5O75140 1603 aa13.86□□□□□ -0.19
PRPF3-206ENST00000493553 ROCK2O75116 1388 aaKnown RBP13.86□□□□□ -0.19
PRPF3-206ENST00000493553 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.86□□□□□ -0.19
PRPF3-206ENST00000493553 PTPRTO14522 1441 aa13.86□□□□□ -0.19
PRPF3-206ENST00000493553 KDM5CP41229 1560 aa13.86□□□□□ -0.19
PRPF3-206ENST00000493553 KIF3BO15066 747 aa13.85□□□□□ -0.19
PRPF3-206ENST00000493553 DCAF11Q8TEB1 546 aa13.85□□□□□ -0.19
PRPF3-206ENST00000493553 A2MP01023 1474 aa13.85□□□□□ -0.19
PRPF3-206ENST00000493553 USP47Q96K76 1375 aa13.84□□□□□ -0.19
PRPF3-206ENST00000493553 CCDC7Q96M83 1385 aa13.84□□□□□ -0.19
PRPF3-206ENST00000493553 SLC24A1O60721 1099 aa13.84□□□□□ -0.19
PRPF3-206ENST00000493553 CARD11Q9BXL7 1154 aa13.84□□□□□ -0.19
PRPF3-206ENST00000493553 PLA2R1Q13018 1463 aa13.84□□□□□ -0.19
PRPF3-206ENST00000493553 VWDEQ8N2E2 1590 aa13.83□□□□□ -0.19
PRPF3-206ENST00000493553 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.19
PRPF3-206ENST00000493553 TET3O43151 1660 aa13.83□□□□□ -0.2
PRPF3-206ENST00000493553 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
PRPF3-206ENST00000493553 NYAP1Q6ZVC0 841 aa13.83□□□□□ -0.2
PRPF3-206ENST00000493553 EYA1Q99502 592 aa13.83□□□□□ -0.2
PRPF3-206ENST00000493553 PRDM15P57071 1507 aaPredicted RBP13.83□□□□□ -0.2
PRPF3-206ENST00000493553 LMTK2Q8IWU2 1503 aa13.83□□□□□ -0.2
PRPF3-206ENST00000493553 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.2
PRPF3-206ENST00000493553 TRPM2O94759 1503 aa13.82□□□□□ -0.2
PRPF3-206ENST00000493553 HIC1Q14526 733 aa13.82□□□□□ -0.2
PRPF3-206ENST00000493553 GPRASP1Q5JY77 1395 aa13.82□□□□□ -0.2
PRPF3-206ENST00000493553 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
PRPF3-206ENST00000493553 ZNF326Q5BKZ1 582 aaKnown RBP13.81□□□□□ -0.2
PRPF3-206ENST00000493553 SAMD7Q7Z3H4 446 aa13.81□□□□□ -0.2
PRPF3-206ENST00000493553 PLA2G2EQ9NZK7 142 aa13.81□□□□□ -0.2
PRPF3-206ENST00000493553 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
PRPF3-206ENST00000493553 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
PRPF3-206ENST00000493553 HECW2Q9P2P5 1572 aa13.8□□□□□ -0.2
PRPF3-206ENST00000493553 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
PRPF3-206ENST00000493553 GPR37O15354 613 aa13.8□□□□□ -0.2
PRPF3-206ENST00000493553 YTHDC1Q96MU7 727 aaKnown RBP13.8□□□□□ -0.2
PRPF3-206ENST00000493553 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
PRPF3-206ENST00000493553 ADGRG1Q9Y653 693 aa13.8□□□□□ -0.2
PRPF3-206ENST00000493553 WBP1LQ9NX94 342 aa13.79□□□□□ -0.2
PRPF3-206ENST00000493553 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
PRPF3-206ENST00000493553 HDGFP51858 240 aaKnown RBP13.78□□□□□ -0.2
PRPF3-206ENST00000493553 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
PRPF3-206ENST00000493553 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
PRPF3-206ENST00000493553 RNF17Q9BXT8 1623 aaKnown RBP13.78□□□□□ -0.2
PRPF3-206ENST00000493553 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
PRPF3-206ENST00000493553 KIDINS220Q9ULH0 1771 aa13.78□□□□□ -0.2
PRPF3-206ENST00000493553 BCORL1Q5H9F3 1711 aa13.77□□□□□ -0.21
PRPF3-206ENST00000493553 RBM46Q8TBY0 533 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms