RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 VPS72Q15906 364 aa16.38■□□□□ 0.21
CTSA-209ENST00000493522 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
CTSA-209ENST00000493522 ATP7BP35670 1465 aa16.37■□□□□ 0.21
CTSA-209ENST00000493522 CABLES1Q8TDN4 633 aa16.37■□□□□ 0.21
CTSA-209ENST00000493522 CCDC9Q9Y3X0 531 aaKnown RBP16.37■□□□□ 0.21
CTSA-209ENST00000493522 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
CTSA-209ENST00000493522 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
CTSA-209ENST00000493522 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
CTSA-209ENST00000493522 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
CTSA-209ENST00000493522 PLCH1Q4KWH8 1693 aa16.35■□□□□ 0.21
CTSA-209ENST00000493522 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
CTSA-209ENST00000493522 ABCA3Q99758 1704 aa16.33■□□□□ 0.21
CTSA-209ENST00000493522 ONECUT3O60422 494 aaPredicted RBP16.33■□□□□ 0.2
CTSA-209ENST00000493522 KRT27Q7Z3Y8 459 aa16.33■□□□□ 0.2
CTSA-209ENST00000493522 PMFBP1Q8TBY8 1022 aa16.33■□□□□ 0.2
CTSA-209ENST00000493522 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.2
CTSA-209ENST00000493522 A0A0G2JS52 829 aa16.32■□□□□ 0.2
CTSA-209ENST00000493522 MYT1Q01538 1121 aa16.32■□□□□ 0.2
CTSA-209ENST00000493522 AKAP12Q02952 1782 aa16.32■□□□□ 0.2
CTSA-209ENST00000493522 DEFB132Q7Z7B7 95 aa16.32■□□□□ 0.2
CTSA-209ENST00000493522 CDK19Q9BWU1 502 aa16.32■□□□□ 0.2
CTSA-209ENST00000493522 PRR36Q9H6K5 1346 aa16.32■□□□□ 0.2
CTSA-209ENST00000493522 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
CTSA-209ENST00000493522 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
CTSA-209ENST00000493522 TRPM3Q9HCF6 1732 aaPredicted RBP16.31■□□□□ 0.2
CTSA-209ENST00000493522 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
CTSA-209ENST00000493522 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
CTSA-209ENST00000493522 NUDT16Q96DE0 195 aaKnown RBP16.28■□□□□ 0.2
CTSA-209ENST00000493522 CABP2Q9NPB3 220 aa16.28■□□□□ 0.2
CTSA-209ENST00000493522 BTG4Q9NY30 223 aa16.28■□□□□ 0.2
CTSA-209ENST00000493522 MON2Q7Z3U7 1717 aa16.28■□□□□ 0.2
CTSA-209ENST00000493522 PPIP5K1Q6PFW1 1433 aa16.28■□□□□ 0.2
CTSA-209ENST00000493522 BAG6P46379 1132 aa16.27■□□□□ 0.2
CTSA-209ENST00000493522 FAM98CQ17RN3 349 aaKnown RBP16.27■□□□□ 0.2
CTSA-209ENST00000493522 NRAPQ86VF7 1730 aa16.27■□□□□ 0.19
CTSA-209ENST00000493522 MYOM1P52179 1685 aa16.27■□□□□ 0.19
CTSA-209ENST00000493522 COL14A1Q05707 1796 aaKnown RBP16.26■□□□□ 0.19
CTSA-209ENST00000493522 ALS2Q96Q42 1657 aa16.25■□□□□ 0.19
CTSA-209ENST00000493522 NGDNQ8NEJ9 315 aaKnown RBP16.25■□□□□ 0.19
CTSA-209ENST00000493522 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.19
CTSA-209ENST00000493522 TESK2Q96S53 571 aa16.24■□□□□ 0.19
CTSA-209ENST00000493522 NRKQ7Z2Y5 1582 aa16.23■□□□□ 0.19
CTSA-209ENST00000493522 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
CTSA-209ENST00000493522 LRP5O75197 1615 aa16.23■□□□□ 0.19
CTSA-209ENST00000493522 HSPA5P11021 654 aaKnown RBP16.22■□□□□ 0.19
CTSA-209ENST00000493522 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
CTSA-209ENST00000493522 CCDC61Q9Y6R9 512 aa16.22■□□□□ 0.19
CTSA-209ENST00000493522 SPATA31A5Q5VU36 1347 aa16.21■□□□□ 0.19
CTSA-209ENST00000493522 SPATA31A7Q8IWB4 1347 aa16.21■□□□□ 0.19
CTSA-209ENST00000493522 TMF1P82094 1093 aa16.21■□□□□ 0.19
CTSA-209ENST00000493522 CRYBG1Q9Y4K1 1723 aa16.2■□□□□ 0.18
CTSA-209ENST00000493522 SLC24A1O60721 1099 aa16.2■□□□□ 0.18
CTSA-209ENST00000493522 POLR3AO14802 1390 aaPredicted RBP16.2■□□□□ 0.18
CTSA-209ENST00000493522 PSDA5PKW4 1024 aaPredicted RBP16.19■□□□□ 0.18
CTSA-209ENST00000493522 RGPD1P0DJD0 1748 aa16.19■□□□□ 0.18
CTSA-209ENST00000493522 ACEP12821 1306 aa16.19■□□□□ 0.18
CTSA-209ENST00000493522 PHRF1Q9P1Y6 1649 aaKnown RBP16.18■□□□□ 0.18
CTSA-209ENST00000493522 THSD7AQ9UPZ6 1657 aa16.18■□□□□ 0.18
CTSA-209ENST00000493522 KIAA0232Q92628 1395 aa16.17■□□□□ 0.18
CTSA-209ENST00000493522 PLEKHG3A1L390 1219 aa16.17■□□□□ 0.18
CTSA-209ENST00000493522 EN1Q05925 392 aaPredicted RBP16.17■□□□□ 0.18
CTSA-209ENST00000493522 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
CTSA-209ENST00000493522 DISP2A7MBM2 1401 aa16.17■□□□□ 0.18
CTSA-209ENST00000493522 PIK3C2AO00443 1686 aa16.17■□□□□ 0.18
CTSA-209ENST00000493522 KIF20BQ96Q89 1820 aa16.17■□□□□ 0.18
CTSA-209ENST00000493522 FAM182BQ5T319 152 aa16.16■□□□□ 0.18
CTSA-209ENST00000493522 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
CTSA-209ENST00000493522 USP6P35125 1406 aa16.16■□□□□ 0.18
CTSA-209ENST00000493522 NINLQ9Y2I6 1382 aa16.15■□□□□ 0.18
CTSA-209ENST00000493522 CDCA8Q53HL2 280 aa16.15■□□□□ 0.18
CTSA-209ENST00000493522 SPATA31A1Q5TZJ5 1347 aa16.15■□□□□ 0.18
CTSA-209ENST00000493522 PUS7Q96PZ0 661 aaKnown RBP16.14■□□□□ 0.17
CTSA-209ENST00000493522 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
CTSA-209ENST00000493522 CD163L1Q9NR16 1453 aa16.14■□□□□ 0.17
CTSA-209ENST00000493522 ZEB1P37275 1124 aaPredicted RBP16.13■□□□□ 0.17
CTSA-209ENST00000493522 CHRNA2Q15822 529 aa16.13■□□□□ 0.17
CTSA-209ENST00000493522 FAM196AQ6ZSG2 479 aa16.13■□□□□ 0.17
CTSA-209ENST00000493522 POLR3GLQ9BT43 218 aa16.13■□□□□ 0.17
CTSA-209ENST00000493522 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
CTSA-209ENST00000493522 CPSF1Q10570 1443 aaKnown RBP16.12■□□□□ 0.17
CTSA-209ENST00000493522 USP54Q70EL1 1684 aa16.12■□□□□ 0.17
CTSA-209ENST00000493522 ZC3H6P61129 1189 aaKnown RBP16.12■□□□□ 0.17
CTSA-209ENST00000493522 A0A1W2PP64 1363 aa16.12■□□□□ 0.17
CTSA-209ENST00000493522 TNS1Q9HBL0 1735 aaKnown RBP16.11■□□□□ 0.17
CTSA-209ENST00000493522 R3HDM1Q15032 1099 aaKnown RBP16.11■□□□□ 0.17
CTSA-209ENST00000493522 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
CTSA-209ENST00000493522 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
CTSA-209ENST00000493522 EVA1CP58658 441 aa16.1■□□□□ 0.17
CTSA-209ENST00000493522 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
CTSA-209ENST00000493522 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
CTSA-209ENST00000493522 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
CTSA-209ENST00000493522 USP35Q9P2H5 1018 aa16.1■□□□□ 0.17
CTSA-209ENST00000493522 SSH2Q76I76 1423 aa16.1■□□□□ 0.17
CTSA-209ENST00000493522 TRIM37O94972 964 aa16.09■□□□□ 0.17
CTSA-209ENST00000493522 EZH2Q15910 746 aaKnown RBP16.09■□□□□ 0.17
CTSA-209ENST00000493522 BARGINQ6ZT62 677 aa16.09■□□□□ 0.17
CTSA-209ENST00000493522 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
CTSA-209ENST00000493522 TERF2IPQ9NYB0 399 aa16.09■□□□□ 0.17
CTSA-209ENST00000493522 ANKRD36BQ8N2N9 1353 aa16.09■□□□□ 0.17
CTSA-209ENST00000493522 ADRA2BP18089 450 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms