RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 HS1BP3Q53T59 392 aa16.32■□□□□ 0.2
PTK7-218ENST00000493339 TBC1D9Q6ZT07 1266 aa16.32■□□□□ 0.2
PTK7-218ENST00000493339 PKP1Q13835 747 aa16.32■□□□□ 0.2
PTK7-218ENST00000493339 IQGAP1P46940 1657 aa16.32■□□□□ 0.2
PTK7-218ENST00000493339 SCAPERQ9BY12 1400 aa16.32■□□□□ 0.2
PTK7-218ENST00000493339 DYNC1I1O14576 645 aa16.32■□□□□ 0.2
PTK7-218ENST00000493339 ZBTB40Q9NUA8 1239 aa16.32■□□□□ 0.2
PTK7-218ENST00000493339 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
PTK7-218ENST00000493339 BMP2KLQ5H9B9 411 aa16.31■□□□□ 0.2
PTK7-218ENST00000493339 PRPF40AO75400 957 aaKnown RBP16.31■□□□□ 0.2
PTK7-218ENST00000493339 PDLIM2Q96JY6 352 aa16.31■□□□□ 0.2
PTK7-218ENST00000493339 RNF214Q8ND24 703 aa16.3■□□□□ 0.2
PTK7-218ENST00000493339 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
PTK7-218ENST00000493339 MADDQ8WXG6 1647 aa16.3■□□□□ 0.2
PTK7-218ENST00000493339 CSPP1Q1MSJ5 1256 aa16.3■□□□□ 0.2
PTK7-218ENST00000493339 CCDC27Q2M243 656 aa16.3■□□□□ 0.2
PTK7-218ENST00000493339 JARID2Q92833 1246 aaPredicted RBP16.3■□□□□ 0.2
PTK7-218ENST00000493339 SLC12A5Q9H2X9 1139 aa16.3■□□□□ 0.2
PTK7-218ENST00000493339 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
PTK7-218ENST00000493339 NSD3Q9BZ95 1437 aa16.3■□□□□ 0.2
PTK7-218ENST00000493339 CHAMP1Q96JM3 812 aa16.29■□□□□ 0.2
PTK7-218ENST00000493339 CFAP53Q96M91 514 aa16.29■□□□□ 0.2
PTK7-218ENST00000493339 C1orf115Q9H7X2 142 aa16.29■□□□□ 0.2
PTK7-218ENST00000493339 IQSEC2Q5JU85 1478 aa16.29■□□□□ 0.2
PTK7-218ENST00000493339 SYCP2Q9BX26 1530 aa16.29■□□□□ 0.2
PTK7-218ENST00000493339 AK9Q5TCS8 1911 aa16.29■□□□□ 0.2
PTK7-218ENST00000493339 MTERF4Q7Z6M4 381 aaKnown RBP16.29■□□□□ 0.2
PTK7-218ENST00000493339 UNC13BO14795 1591 aa16.29■□□□□ 0.2
PTK7-218ENST00000493339 SASS6Q6UVJ0 657 aa16.29■□□□□ 0.2
PTK7-218ENST00000493339 KDM5AP29375 1690 aaKnown RBP16.28■□□□□ 0.2
PTK7-218ENST00000493339 ERVK-7P63135 1459 aa16.28■□□□□ 0.2
PTK7-218ENST00000493339 KIF16BQ96L93 1317 aa16.28■□□□□ 0.2
PTK7-218ENST00000493339 DNTTIP2Q5QJE6 756 aaKnown RBP16.28■□□□□ 0.2
PTK7-218ENST00000493339 CLEC17AQ6ZS10 378 aa16.28■□□□□ 0.2
PTK7-218ENST00000493339 TSC1Q92574 1164 aa16.28■□□□□ 0.2
PTK7-218ENST00000493339 MPNDQ8N594 471 aa16.28■□□□□ 0.2
PTK7-218ENST00000493339 ATP10AO60312 1499 aa16.27■□□□□ 0.2
PTK7-218ENST00000493339 SYCE3A1L190 88 aa16.27■□□□□ 0.2
PTK7-218ENST00000493339 PTMAP06454 111 aaKnown RBP16.27■□□□□ 0.2
PTK7-218ENST00000493339 FOXD4L5Q5VV16 416 aaPredicted RBP16.27■□□□□ 0.19
PTK7-218ENST00000493339 FOXD4L4Q8WXT5 416 aaPredicted RBP16.27■□□□□ 0.19
PTK7-218ENST00000493339 U2SURPO15042 1029 aaKnown RBP16.26■□□□□ 0.19
PTK7-218ENST00000493339 NUCB2P80303 420 aa16.26■□□□□ 0.19
PTK7-218ENST00000493339 GPT2Q8TD30 523 aa16.26■□□□□ 0.19
PTK7-218ENST00000493339 IQGAP3Q86VI3 1631 aa16.26■□□□□ 0.19
PTK7-218ENST00000493339 KANK1Q14678 1352 aa16.26■□□□□ 0.19
PTK7-218ENST00000493339 ABCA8O94911 1581 aa16.25■□□□□ 0.19
PTK7-218ENST00000493339 CCDC39Q9UFE4 941 aa16.25■□□□□ 0.19
PTK7-218ENST00000493339 CCDC94Q9BW85 323 aaPredicted RBP16.25■□□□□ 0.19
PTK7-218ENST00000493339 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
PTK7-218ENST00000493339 CEP152O94986 1710 aa16.24■□□□□ 0.19
PTK7-218ENST00000493339 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
PTK7-218ENST00000493339 CT47B1P0C2W7 299 aaPredicted RBP16.23■□□□□ 0.19
PTK7-218ENST00000493339 ZGPATQ8N5A5 531 aaKnown RBP16.23■□□□□ 0.19
PTK7-218ENST00000493339 NSFL1CQ9UNZ2 370 aaKnown RBP16.23■□□□□ 0.19
PTK7-218ENST00000493339 CBX1P83916 185 aa16.23■□□□□ 0.19
PTK7-218ENST00000493339 FAM177BA6PVY3 158 aa16.22■□□□□ 0.19
PTK7-218ENST00000493339 IPO8O15397 1037 aaKnown RBP16.22■□□□□ 0.19
PTK7-218ENST00000493339 ARHGAP5Q13017 1502 aa16.22■□□□□ 0.19
PTK7-218ENST00000493339 MCM5P33992 734 aa16.22■□□□□ 0.19
PTK7-218ENST00000493339 LRSAM1Q6UWE0 723 aa16.22■□□□□ 0.19
PTK7-218ENST00000493339 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
PTK7-218ENST00000493339 ZSCAN20P17040 1043 aaPredicted RBP16.21■□□□□ 0.19
PTK7-218ENST00000493339 DMTNQ08495 405 aa16.21■□□□□ 0.19
PTK7-218ENST00000493339 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.19
PTK7-218ENST00000493339 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
PTK7-218ENST00000493339 MAST1Q9Y2H9 1570 aa16.21■□□□□ 0.19
PTK7-218ENST00000493339 CDC45O75419 566 aa16.21■□□□□ 0.19
PTK7-218ENST00000493339 RABEP1Q15276 862 aa16.2■□□□□ 0.18
PTK7-218ENST00000493339 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
PTK7-218ENST00000493339 CYP2E1P05181 493 aaPredicted RBP16.2■□□□□ 0.18
PTK7-218ENST00000493339 KIAA2012Q0VF49 1180 aa16.2■□□□□ 0.18
PTK7-218ENST00000493339 TMPOP42166 694 aaKnown RBP16.2■□□□□ 0.18
PTK7-218ENST00000493339 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
PTK7-218ENST00000493339 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
PTK7-218ENST00000493339 ZNF518AQ6AHZ1 1483 aa16.19■□□□□ 0.18
PTK7-218ENST00000493339 ZNF830Q96NB3 372 aaPredicted RBP16.19■□□□□ 0.18
PTK7-218ENST00000493339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTK7-218ENST00000493339 SHROOM2Q13796 1616 aa16.18■□□□□ 0.18
PTK7-218ENST00000493339 GCC1Q96CN9 775 aa16.18■□□□□ 0.18
PTK7-218ENST00000493339 PTPRTO14522 1441 aa16.17■□□□□ 0.18
PTK7-218ENST00000493339 PPIP5K1Q6PFW1 1433 aa16.17■□□□□ 0.18
PTK7-218ENST00000493339 STAC3Q96MF2 364 aa16.17■□□□□ 0.18
PTK7-218ENST00000493339 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
PTK7-218ENST00000493339 GSPT1P15170 499 aaKnown RBP16.17■□□□□ 0.18
PTK7-218ENST00000493339 C14orf37Q86TY3 774 aa16.17■□□□□ 0.18
PTK7-218ENST00000493339 MYRIPQ8NFW9 859 aa16.17■□□□□ 0.18
PTK7-218ENST00000493339 ZDHHC9Q9Y397 364 aa16.17■□□□□ 0.18
PTK7-218ENST00000493339 FOXD4L6Q3SYB3 417 aaPredicted RBP16.16■□□□□ 0.18
PTK7-218ENST00000493339 UTP14CQ5TAP6 766 aaKnown RBP16.16■□□□□ 0.18
PTK7-218ENST00000493339 FOXD4L3Q6VB84 417 aaPredicted RBP16.16■□□□□ 0.18
PTK7-218ENST00000493339 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
PTK7-218ENST00000493339 C17orf53Q8N3J3 647 aaPredicted RBP16.16■□□□□ 0.18
PTK7-218ENST00000493339 NOS1P29475 1434 aa16.16■□□□□ 0.18
PTK7-218ENST00000493339 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
PTK7-218ENST00000493339 PREX2Q70Z35 1606 aa16.15■□□□□ 0.18
PTK7-218ENST00000493339 CFAP74Q9C0B2 1584 aa16.15■□□□□ 0.18
PTK7-218ENST00000493339 ZBTB7BO15156 539 aaPredicted RBP16.15■□□□□ 0.18
PTK7-218ENST00000493339 FGD1P98174 961 aa16.15■□□□□ 0.18
PTK7-218ENST00000493339 CD109Q6YHK3 1445 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms