RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 PLEKHG5O94827 1062 aa23.54■■□□□ 1.36
C9orf78-206ENST00000492991 NBPF8Q3BBV2 869 aa23.54■■□□□ 1.36
C9orf78-206ENST00000492991 EP400Q96L91 3159 aa23.53■■□□□ 1.36
C9orf78-206ENST00000492991 L3MBTL2Q969R5 705 aa23.53■■□□□ 1.36
C9orf78-206ENST00000492991 BTG4Q9NY30 223 aa23.53■■□□□ 1.36
C9orf78-206ENST00000492991 CCDC9Q9Y3X0 531 aaKnown RBP23.52■■□□□ 1.36
C9orf78-206ENST00000492991 ACEP12821 1306 aa23.52■■□□□ 1.36
C9orf78-206ENST00000492991 CENPJQ9HC77 1338 aaPredicted RBP23.52■■□□□ 1.36
C9orf78-206ENST00000492991 COL14A1Q05707 1796 aaKnown RBP23.5■■□□□ 1.35
C9orf78-206ENST00000492991 BLMP54132 1417 aaPredicted RBP23.5■■□□□ 1.35
C9orf78-206ENST00000492991 KRT27Q7Z3Y8 459 aa23.48■■□□□ 1.35
C9orf78-206ENST00000492991 BRD4O60885 1362 aaPredicted RBP23.48■■□□□ 1.35
C9orf78-206ENST00000492991 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
C9orf78-206ENST00000492991 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
C9orf78-206ENST00000492991 PRDM11Q9NQV5 511 aa23.47■■□□□ 1.35
C9orf78-206ENST00000492991 SPATA31A5Q5VU36 1347 aa23.46■■□□□ 1.35
C9orf78-206ENST00000492991 NRAPQ86VF7 1730 aa23.46■■□□□ 1.35
C9orf78-206ENST00000492991 SPATA31A7Q8IWB4 1347 aa23.46■■□□□ 1.35
C9orf78-206ENST00000492991 SRPK2P78362 688 aaKnown RBP23.45■■□□□ 1.34
C9orf78-206ENST00000492991 ZRANB1Q9UGI0 708 aa23.45■■□□□ 1.34
C9orf78-206ENST00000492991 SIN3AQ96ST3 1273 aa23.44■■□□□ 1.34
C9orf78-206ENST00000492991 BRWD3Q6RI45 1802 aa23.44■■□□□ 1.34
C9orf78-206ENST00000492991 KIAA0232Q92628 1395 aa23.43■■□□□ 1.34
C9orf78-206ENST00000492991 FAM98CQ17RN3 349 aaKnown RBP23.43■■□□□ 1.34
C9orf78-206ENST00000492991 ABTB2Q8N961 1025 aa23.42■■□□□ 1.34
C9orf78-206ENST00000492991 PPIP5K1Q6PFW1 1433 aa23.42■■□□□ 1.34
C9orf78-206ENST00000492991 SF3B2Q13435 895 aaKnown RBP23.41■■□□□ 1.34
C9orf78-206ENST00000492991 CABP2Q9NPB3 220 aa23.41■■□□□ 1.34
C9orf78-206ENST00000492991 USP19O94966 1318 aa23.4■■□□□ 1.34
C9orf78-206ENST00000492991 NLRP13Q86W25 1043 aa23.4■■□□□ 1.34
C9orf78-206ENST00000492991 CPDO75976 1380 aa23.4■■□□□ 1.34
C9orf78-206ENST00000492991 ZC3H6P61129 1189 aaKnown RBP23.39■■□□□ 1.33
C9orf78-206ENST00000492991 EVC2Q86UK5 1308 aa23.38■■□□□ 1.33
C9orf78-206ENST00000492991 NEUROD1Q13562 356 aa23.38■■□□□ 1.33
C9orf78-206ENST00000492991 NUTM2GQ5VZR2 741 aa23.38■■□□□ 1.33
C9orf78-206ENST00000492991 PHRF1Q9P1Y6 1649 aaKnown RBP23.37■■□□□ 1.33
C9orf78-206ENST00000492991 SPATA31A1Q5TZJ5 1347 aa23.37■■□□□ 1.33
C9orf78-206ENST00000492991 A0A0G2JS52 829 aa23.37■■□□□ 1.33
C9orf78-206ENST00000492991 MYT1Q01538 1121 aa23.37■■□□□ 1.33
C9orf78-206ENST00000492991 CABP1Q9NZU7 370 aa23.37■■□□□ 1.33
C9orf78-206ENST00000492991 TRPM1Q7Z4N2 1603 aa23.37■■□□□ 1.33
C9orf78-206ENST00000492991 CHRNA2Q15822 529 aa23.36■■□□□ 1.33
C9orf78-206ENST00000492991 ROCK2O75116 1388 aaKnown RBP23.36■■□□□ 1.33
C9orf78-206ENST00000492991 QRICH2Q9H0J4 1663 aa23.35■■□□□ 1.33
C9orf78-206ENST00000492991 GCP02774 474 aa23.35■■□□□ 1.33
C9orf78-206ENST00000492991 USP6P35125 1406 aa23.33■■□□□ 1.33
C9orf78-206ENST00000492991 DEFB132Q7Z7B7 95 aa23.33■■□□□ 1.33
C9orf78-206ENST00000492991 ZNF692Q9BU19 519 aaPredicted RBP23.33■■□□□ 1.33
C9orf78-206ENST00000492991 EVA1CP58658 441 aa23.32■■□□□ 1.32
C9orf78-206ENST00000492991 BARGINQ6ZT62 677 aa23.32■■□□□ 1.32
C9orf78-206ENST00000492991 SSH2Q76I76 1423 aa23.32■■□□□ 1.32
C9orf78-206ENST00000492991 THSD7AQ9UPZ6 1657 aa23.32■■□□□ 1.32
C9orf78-206ENST00000492991 STRN4Q9NRL3 753 aa23.31■■□□□ 1.32
C9orf78-206ENST00000492991 NRKQ7Z2Y5 1582 aa23.31■■□□□ 1.32
C9orf78-206ENST00000492991 BAG6P46379 1132 aa23.3■■□□□ 1.32
C9orf78-206ENST00000492991 SRCAPQ6ZRS2 3230 aa23.3■■□□□ 1.32
C9orf78-206ENST00000492991 THRAP3Q9Y2W1 955 aaKnown RBP23.29■■□□□ 1.32
C9orf78-206ENST00000492991 CAMTA1Q9Y6Y1 1673 aa23.28■■□□□ 1.32
C9orf78-206ENST00000492991 NLRP6P59044 892 aa23.28■■□□□ 1.32
C9orf78-206ENST00000492991 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.32
C9orf78-206ENST00000492991 LMO7Q8WWI1 1683 aa23.26■■□□□ 1.31
C9orf78-206ENST00000492991 FAM196AQ6ZSG2 479 aa23.26■■□□□ 1.31
C9orf78-206ENST00000492991 TCP11L2Q8N4U5 519 aa23.26■■□□□ 1.31
C9orf78-206ENST00000492991 LARP1Q6PKG0 1096 aaKnown RBP23.25■■□□□ 1.31
C9orf78-206ENST00000492991 AATKQ6ZMQ8 1374 aa23.25■■□□□ 1.31
C9orf78-206ENST00000492991 SLIT3O75094 1523 aa23.24■■□□□ 1.31
C9orf78-206ENST00000492991 DISP2A7MBM2 1401 aa23.24■■□□□ 1.31
C9orf78-206ENST00000492991 TTC21BQ7Z4L5 1316 aa23.23■■□□□ 1.31
C9orf78-206ENST00000492991 TTC21AQ8NDW8 1320 aa23.23■■□□□ 1.31
C9orf78-206ENST00000492991 CPSF1Q10570 1443 aaKnown RBP23.23■■□□□ 1.31
C9orf78-206ENST00000492991 FAM182BQ5T319 152 aa23.22■■□□□ 1.31
C9orf78-206ENST00000492991 CARD11Q9BXL7 1154 aa23.22■■□□□ 1.31
C9orf78-206ENST00000492991 PDE3BQ13370 1112 aa23.21■■□□□ 1.31
C9orf78-206ENST00000492991 KCNH5Q8NCM2 988 aa23.21■■□□□ 1.31
C9orf78-206ENST00000492991 USP35Q9P2H5 1018 aa23.21■■□□□ 1.31
C9orf78-206ENST00000492991 COL5A2P05997 1499 aaPredicted RBP23.21■■□□□ 1.31
C9orf78-206ENST00000492991 RGPD1P0DJD0 1748 aa23.2■■□□□ 1.3
C9orf78-206ENST00000492991 C11orf95C9JLR9 678 aaPredicted RBP23.2■■□□□ 1.3
C9orf78-206ENST00000492991 TONSLQ96HA7 1378 aa23.19■■□□□ 1.3
C9orf78-206ENST00000492991 PUS7Q96PZ0 661 aaKnown RBP23.19■■□□□ 1.3
C9orf78-206ENST00000492991 CRB1P82279 1406 aa23.18■■□□□ 1.3
C9orf78-206ENST00000492991 EN1Q05925 392 aaPredicted RBP23.18■■□□□ 1.3
C9orf78-206ENST00000492991 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
C9orf78-206ENST00000492991 PIK3C2AO00443 1686 aa23.16■■□□□ 1.3
C9orf78-206ENST00000492991 KTN1Q86UP2 1357 aaKnown RBP23.15■■□□□ 1.3
C9orf78-206ENST00000492991 TRIM37O94972 964 aa23.15■■□□□ 1.3
C9orf78-206ENST00000492991 PARD3Q8TEW0 1356 aa23.14■■□□□ 1.3
C9orf78-206ENST00000492991 AKAP12Q02952 1782 aa23.14■■□□□ 1.3
C9orf78-206ENST00000492991 SLC24A1O60721 1099 aa23.14■■□□□ 1.29
C9orf78-206ENST00000492991 TRIM26Q12899 539 aaPredicted RBP23.14■■□□□ 1.29
C9orf78-206ENST00000492991 CAMKK2Q96RR4 588 aa23.14■■□□□ 1.29
C9orf78-206ENST00000492991 WDR17Q8IZU2 1322 aa23.12■■□□□ 1.29
C9orf78-206ENST00000492991 COL18A1P39060 1754 aa23.12■■□□□ 1.29
C9orf78-206ENST00000492991 AXIN2Q9Y2T1 843 aa23.12■■□□□ 1.29
C9orf78-206ENST00000492991 USP31Q70CQ4 1352 aa23.12■■□□□ 1.29
C9orf78-206ENST00000492991 ZBTB7CA1YPR0 619 aa23.11■■□□□ 1.29
C9orf78-206ENST00000492991 CDCA7Q9BWT1 371 aaPredicted RBP23.11■■□□□ 1.29
C9orf78-206ENST00000492991 TNS1Q9HBL0 1735 aaKnown RBP23.11■■□□□ 1.29
C9orf78-206ENST00000492991 APBA3O96018 575 aa23.1■■□□□ 1.29
C9orf78-206ENST00000492991 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms