RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 ATP7BP35670 1465 aa16.73■□□□□ 0.27
PDCD4-210ENST00000492932 ALS2Q96Q42 1657 aa16.73■□□□□ 0.27
PDCD4-210ENST00000492932 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
PDCD4-210ENST00000492932 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
PDCD4-210ENST00000492932 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
PDCD4-210ENST00000492932 COL14A1Q05707 1796 aaKnown RBP16.72■□□□□ 0.27
PDCD4-210ENST00000492932 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
PDCD4-210ENST00000492932 CENPJQ9HC77 1338 aaPredicted RBP16.7■□□□□ 0.26
PDCD4-210ENST00000492932 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
PDCD4-210ENST00000492932 NBPF1Q3BBV0 1214 aa16.7■□□□□ 0.26
PDCD4-210ENST00000492932 ACEP12821 1306 aa16.7■□□□□ 0.26
PDCD4-210ENST00000492932 ONECUT3O60422 494 aaPredicted RBP16.69■□□□□ 0.26
PDCD4-210ENST00000492932 FAM98CQ17RN3 349 aaKnown RBP16.68■□□□□ 0.26
PDCD4-210ENST00000492932 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
PDCD4-210ENST00000492932 POLR3AO14802 1390 aaPredicted RBP16.67■□□□□ 0.26
PDCD4-210ENST00000492932 PLEKHG3A1L390 1219 aa16.67■□□□□ 0.26
PDCD4-210ENST00000492932 ABTB2Q8N961 1025 aa16.67■□□□□ 0.26
PDCD4-210ENST00000492932 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
PDCD4-210ENST00000492932 NUTM2GQ5VZR2 741 aa16.66■□□□□ 0.26
PDCD4-210ENST00000492932 NRAPQ86VF7 1730 aa16.66■□□□□ 0.26
PDCD4-210ENST00000492932 L3MBTL2Q969R5 705 aa16.66■□□□□ 0.26
PDCD4-210ENST00000492932 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
PDCD4-210ENST00000492932 KIAA0232Q92628 1395 aa16.65■□□□□ 0.26
PDCD4-210ENST00000492932 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
PDCD4-210ENST00000492932 PPIP5K1Q6PFW1 1433 aa16.64■□□□□ 0.25
PDCD4-210ENST00000492932 EVA1CP58658 441 aa16.64■□□□□ 0.25
PDCD4-210ENST00000492932 ZC3H6P61129 1189 aaKnown RBP16.64■□□□□ 0.25
PDCD4-210ENST00000492932 NLRP13Q86W25 1043 aa16.64■□□□□ 0.25
PDCD4-210ENST00000492932 STRN4Q9NRL3 753 aa16.64■□□□□ 0.25
PDCD4-210ENST00000492932 CRYBG1Q9Y4K1 1723 aa16.64■□□□□ 0.25
PDCD4-210ENST00000492932 SPATA31A5Q5VU36 1347 aa16.64■□□□□ 0.25
PDCD4-210ENST00000492932 SPATA31A7Q8IWB4 1347 aa16.64■□□□□ 0.25
PDCD4-210ENST00000492932 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
PDCD4-210ENST00000492932 CABP2Q9NPB3 220 aa16.63■□□□□ 0.25
PDCD4-210ENST00000492932 PHRF1Q9P1Y6 1649 aaKnown RBP16.63■□□□□ 0.25
PDCD4-210ENST00000492932 BAG6P46379 1132 aa16.62■□□□□ 0.25
PDCD4-210ENST00000492932 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
PDCD4-210ENST00000492932 EVC2Q86UK5 1308 aa16.62■□□□□ 0.25
PDCD4-210ENST00000492932 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
PDCD4-210ENST00000492932 BRD4O60885 1362 aaPredicted RBP16.62■□□□□ 0.25
PDCD4-210ENST00000492932 ROCK2O75116 1388 aaKnown RBP16.62■□□□□ 0.25
PDCD4-210ENST00000492932 DEFB132Q7Z7B7 95 aa16.61■□□□□ 0.25
PDCD4-210ENST00000492932 CABP1Q9NZU7 370 aa16.59■□□□□ 0.25
PDCD4-210ENST00000492932 SPATA31A1Q5TZJ5 1347 aa16.59■□□□□ 0.25
PDCD4-210ENST00000492932 USP35Q9P2H5 1018 aa16.58■□□□□ 0.24
PDCD4-210ENST00000492932 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.24
PDCD4-210ENST00000492932 NRKQ7Z2Y5 1582 aa16.56■□□□□ 0.24
PDCD4-210ENST00000492932 CPDO75976 1380 aa16.56■□□□□ 0.24
PDCD4-210ENST00000492932 EP400Q96L91 3159 aa16.56■□□□□ 0.24
PDCD4-210ENST00000492932 USP19O94966 1318 aa16.56■□□□□ 0.24
PDCD4-210ENST00000492932 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
PDCD4-210ENST00000492932 GCP02774 474 aa16.56■□□□□ 0.24
PDCD4-210ENST00000492932 NLRP6P59044 892 aa16.56■□□□□ 0.24
PDCD4-210ENST00000492932 USP6P35125 1406 aa16.55■□□□□ 0.24
PDCD4-210ENST00000492932 PDE3BQ13370 1112 aa16.55■□□□□ 0.24
PDCD4-210ENST00000492932 ZNF692Q9BU19 519 aaPredicted RBP16.55■□□□□ 0.24
PDCD4-210ENST00000492932 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
PDCD4-210ENST00000492932 THSD7AQ9UPZ6 1657 aa16.54■□□□□ 0.24
PDCD4-210ENST00000492932 FAM182BQ5T319 152 aa16.54■□□□□ 0.24
PDCD4-210ENST00000492932 FAM196AQ6ZSG2 479 aa16.54■□□□□ 0.24
PDCD4-210ENST00000492932 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
PDCD4-210ENST00000492932 BARGINQ6ZT62 677 aa16.53■□□□□ 0.24
PDCD4-210ENST00000492932 TCP11L2Q8N4U5 519 aa16.53■□□□□ 0.24
PDCD4-210ENST00000492932 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
PDCD4-210ENST00000492932 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
PDCD4-210ENST00000492932 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
PDCD4-210ENST00000492932 EN1Q05925 392 aaPredicted RBP16.51■□□□□ 0.23
PDCD4-210ENST00000492932 CARD11Q9BXL7 1154 aa16.51■□□□□ 0.23
PDCD4-210ENST00000492932 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
PDCD4-210ENST00000492932 KCNH5Q8NCM2 988 aa16.49■□□□□ 0.23
PDCD4-210ENST00000492932 LMO7Q8WWI1 1683 aa16.49■□□□□ 0.23
PDCD4-210ENST00000492932 TTC21AQ8NDW8 1320 aa16.48■□□□□ 0.23
PDCD4-210ENST00000492932 CRB1P82279 1406 aa16.48■□□□□ 0.23
PDCD4-210ENST00000492932 C11orf95C9JLR9 678 aaPredicted RBP16.48■□□□□ 0.23
PDCD4-210ENST00000492932 TRIM37O94972 964 aa16.48■□□□□ 0.23
PDCD4-210ENST00000492932 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
PDCD4-210ENST00000492932 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
PDCD4-210ENST00000492932 SLIT3O75094 1523 aa16.47■□□□□ 0.23
PDCD4-210ENST00000492932 APBA3O96018 575 aa16.47■□□□□ 0.23
PDCD4-210ENST00000492932 TOM1L2Q6ZVM7 507 aa16.47■□□□□ 0.23
PDCD4-210ENST00000492932 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
PDCD4-210ENST00000492932 TTC21BQ7Z4L5 1316 aa16.46■□□□□ 0.23
PDCD4-210ENST00000492932 PSDA5PKW4 1024 aaPredicted RBP16.46■□□□□ 0.23
PDCD4-210ENST00000492932 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
PDCD4-210ENST00000492932 SOX12O15370 315 aa16.45■□□□□ 0.22
PDCD4-210ENST00000492932 PIK3C2AO00443 1686 aa16.44■□□□□ 0.22
PDCD4-210ENST00000492932 PARD3Q8TEW0 1356 aa16.44■□□□□ 0.22
PDCD4-210ENST00000492932 SBNO2Q9Y2G9 1366 aa16.44■□□□□ 0.22
PDCD4-210ENST00000492932 CSB-PGBD3P0DP91 1061 aa16.44■□□□□ 0.22
PDCD4-210ENST00000492932 EZH2Q15910 746 aaKnown RBP16.44■□□□□ 0.22
PDCD4-210ENST00000492932 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
PDCD4-210ENST00000492932 TNS1Q9HBL0 1735 aaKnown RBP16.43■□□□□ 0.22
PDCD4-210ENST00000492932 HDGFL2Q7Z4V5 671 aaPredicted RBP16.43■□□□□ 0.22
PDCD4-210ENST00000492932 AKAP12Q02952 1782 aa16.43■□□□□ 0.22
PDCD4-210ENST00000492932 CPSF1Q10570 1443 aaKnown RBP16.43■□□□□ 0.22
PDCD4-210ENST00000492932 DDB1Q16531 1140 aa16.42■□□□□ 0.22
PDCD4-210ENST00000492932 CDCA7Q9BWT1 371 aaPredicted RBP16.42■□□□□ 0.22
PDCD4-210ENST00000492932 WDR17Q8IZU2 1322 aa16.42■□□□□ 0.22
PDCD4-210ENST00000492932 R3HDM1Q15032 1099 aaKnown RBP16.41■□□□□ 0.22
PDCD4-210ENST00000492932 NBPF14Q5TI25 921 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms