RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 NSD2O96028 1365 aa10.87□□□□□ -0.67
FDPS-218ENST00000492887 EDC4Q6P2E9 1401 aaKnown RBP10.86□□□□□ -0.67
FDPS-218ENST00000492887 ATF3P18847 181 aa10.86□□□□□ -0.67
FDPS-218ENST00000492887 CARD14Q9BXL6 1004 aa10.86□□□□□ -0.67
FDPS-218ENST00000492887 ACEP12821 1306 aa10.85□□□□□ -0.67
FDPS-218ENST00000492887 LTN1O94822 1766 aa10.85□□□□□ -0.67
FDPS-218ENST00000492887 LRRC7Q96NW7 1537 aa10.85□□□□□ -0.67
FDPS-218ENST00000492887 TNNT2P45379 298 aaPredicted RBP10.85□□□□□ -0.67
FDPS-218ENST00000492887 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
FDPS-218ENST00000492887 NPC1L1Q9UHC9 1359 aa10.85□□□□□ -0.67
FDPS-218ENST00000492887 PIK3C2AO00443 1686 aa10.85□□□□□ -0.67
FDPS-218ENST00000492887 ESCO1Q5FWF5 840 aa10.84□□□□□ -0.67
FDPS-218ENST00000492887 NLRP13Q86W25 1043 aa10.84□□□□□ -0.67
FDPS-218ENST00000492887 FAM9BQ8IZU0 186 aa10.84□□□□□ -0.67
FDPS-218ENST00000492887 ZNF692Q9BU19 519 aaPredicted RBP10.84□□□□□ -0.67
FDPS-218ENST00000492887 GGNBP2Q9H3C7 697 aa10.84□□□□□ -0.67
FDPS-218ENST00000492887 USP6P35125 1406 aa10.84□□□□□ -0.67
FDPS-218ENST00000492887 DCCP43146 1447 aa10.84□□□□□ -0.67
FDPS-218ENST00000492887 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
FDPS-218ENST00000492887 NCOA3Q9Y6Q9 1424 aa10.84□□□□□ -0.67
FDPS-218ENST00000492887 BRD4O60885 1362 aaPredicted RBP10.83□□□□□ -0.68
FDPS-218ENST00000492887 C19orf44Q9H6X5 657 aa10.83□□□□□ -0.68
FDPS-218ENST00000492887 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
FDPS-218ENST00000492887 TRPM3Q9HCF6 1732 aaPredicted RBP10.82□□□□□ -0.68
FDPS-218ENST00000492887 MARF1Q9Y4F3 1742 aaKnown RBP10.82□□□□□ -0.68
FDPS-218ENST00000492887 PAK3O75914 559 aaPredicted RBP10.82□□□□□ -0.68
FDPS-218ENST00000492887 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
FDPS-218ENST00000492887 USP54Q70EL1 1684 aa10.82□□□□□ -0.68
FDPS-218ENST00000492887 C1orf167Q5SNV9 1468 aa10.81□□□□□ -0.68
FDPS-218ENST00000492887 PLEKHG3A1L390 1219 aa10.81□□□□□ -0.68
FDPS-218ENST00000492887 PPP2R1AP30153 589 aa10.81□□□□□ -0.68
FDPS-218ENST00000492887 CCDC184Q52MB2 194 aa10.81□□□□□ -0.68
FDPS-218ENST00000492887 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
FDPS-218ENST00000492887 SHPRHQ149N8 1683 aa10.81□□□□□ -0.68
FDPS-218ENST00000492887 MST1RQ04912 1400 aa10.81□□□□□ -0.68
FDPS-218ENST00000492887 NME9Q86XW9 330 aa10.8□□□□□ -0.68
FDPS-218ENST00000492887 COG3Q96JB2 828 aa10.8□□□□□ -0.68
FDPS-218ENST00000492887 TTC21BQ7Z4L5 1316 aa10.8□□□□□ -0.68
FDPS-218ENST00000492887 POLR3AO14802 1390 aaPredicted RBP10.79□□□□□ -0.68
FDPS-218ENST00000492887 CENPBP07199 599 aaPredicted RBP10.79□□□□□ -0.68
FDPS-218ENST00000492887 PSME1Q06323 249 aa10.79□□□□□ -0.68
FDPS-218ENST00000492887 WDR43Q15061 677 aaKnown RBP eCLIP10.79□□□□□ -0.683e-7■■■■□ 25.4
FDPS-218ENST00000492887 CFAP53Q96M91 514 aa10.79□□□□□ -0.68
FDPS-218ENST00000492887 TTC21AQ8NDW8 1320 aa10.79□□□□□ -0.68
FDPS-218ENST00000492887 FYB1O15117 783 aa10.78□□□□□ -0.68
FDPS-218ENST00000492887 SOX12O15370 315 aa10.78□□□□□ -0.68
FDPS-218ENST00000492887 ALS2Q96Q42 1657 aa10.78□□□□□ -0.68
FDPS-218ENST00000492887 RGPD5Q99666 1765 aa10.77□□□□□ -0.68
FDPS-218ENST00000492887 NHSL1Q5SYE7 1610 aa10.77□□□□□ -0.68
FDPS-218ENST00000492887 PHRF1Q9P1Y6 1649 aaKnown RBP10.77□□□□□ -0.68
FDPS-218ENST00000492887 ROBO1Q9Y6N7 1651 aa10.77□□□□□ -0.69
FDPS-218ENST00000492887 PLEKHG5O94827 1062 aa10.77□□□□□ -0.69
FDPS-218ENST00000492887 LMOD2Q6P5Q4 547 aa10.77□□□□□ -0.69
FDPS-218ENST00000492887 ORAI2Q96SN7 254 aa10.77□□□□□ -0.69
FDPS-218ENST00000492887 PPM1GO15355 546 aaPredicted RBP10.76□□□□□ -0.69
FDPS-218ENST00000492887 HNRNPUQ00839 825 aaKnown RBP eCLIP10.76□□□□□ -0.69
FDPS-218ENST00000492887 XPCQ01831 940 aaPredicted RBP10.76□□□□□ -0.69
FDPS-218ENST00000492887 ZRANB1Q9UGI0 708 aa10.76□□□□□ -0.69
FDPS-218ENST00000492887 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
FDPS-218ENST00000492887 FOXO3O43524 673 aa10.75□□□□□ -0.69
FDPS-218ENST00000492887 NUTM2GQ5VZR2 741 aa10.75□□□□□ -0.69
FDPS-218ENST00000492887 ABTB2Q8N961 1025 aa10.75□□□□□ -0.69
FDPS-218ENST00000492887 PHLPP1O60346 1717 aa10.75□□□□□ -0.69
FDPS-218ENST00000492887 OVOS2A0A0J9YW53 1432 aa10.75□□□□□ -0.69
FDPS-218ENST00000492887 OVOS2Q6IE36 1432 aa10.75□□□□□ -0.69
FDPS-218ENST00000492887 ZBTB7CA1YPR0 619 aa10.74□□□□□ -0.69
FDPS-218ENST00000492887 MTHFSP49914 203 aa10.74□□□□□ -0.69
FDPS-218ENST00000492887 NLRP6P59044 892 aa10.74□□□□□ -0.69
FDPS-218ENST00000492887 KRT28Q7Z3Y7 464 aa10.74□□□□□ -0.69
FDPS-218ENST00000492887 PEAK1Q9H792 1746 aa10.74□□□□□ -0.69
FDPS-218ENST00000492887 ABCA3Q99758 1704 aa10.73□□□□□ -0.69
FDPS-218ENST00000492887 RGPD2P0DJD1 1756 aa10.73□□□□□ -0.69
FDPS-218ENST00000492887 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
FDPS-218ENST00000492887 NPHP3Q7Z494 1330 aa10.73□□□□□ -0.69
FDPS-218ENST00000492887 DLG5Q8TDM6 1919 aa10.72□□□□□ -0.69
FDPS-218ENST00000492887 SSH2Q76I76 1423 aa10.72□□□□□ -0.69
FDPS-218ENST00000492887 CDK12Q9NYV4 1490 aaPredicted RBP10.72□□□□□ -0.69
FDPS-218ENST00000492887 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
FDPS-218ENST00000492887 RRS1Q15050 365 aaKnown RBP10.71□□□□□ -0.69
FDPS-218ENST00000492887 DDX17Q92841 729 aaKnown RBP10.71□□□□□ -0.69
FDPS-218ENST00000492887 NUDCQ9Y266 331 aa10.71□□□□□ -0.69
FDPS-218ENST00000492887 VIRMAQ69YN4 1812 aaKnown RBP10.7□□□□□ -0.7
FDPS-218ENST00000492887 TNS3Q68CZ2 1445 aa10.7□□□□□ -0.7
FDPS-218ENST00000492887 USP31Q70CQ4 1352 aa10.7□□□□□ -0.7
FDPS-218ENST00000492887 SENP3-EIF4A1A0A087X0R7 540 aa10.7□□□□□ -0.7
FDPS-218ENST00000492887 U2SURPO15042 1029 aaKnown RBP10.7□□□□□ -0.7
FDPS-218ENST00000492887 PNISRQ8TF01 805 aaKnown RBP10.7□□□□□ -0.7
FDPS-218ENST00000492887 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
FDPS-218ENST00000492887 EMILIN1Q9Y6C2 1016 aa10.7□□□□□ -0.7
FDPS-218ENST00000492887 AATKQ6ZMQ8 1374 aa10.69□□□□□ -0.7
FDPS-218ENST00000492887 FBLN1P23142 703 aa10.69□□□□□ -0.7
FDPS-218ENST00000492887 AMPHP49418 695 aa10.69□□□□□ -0.7
FDPS-218ENST00000492887 BRINP3Q76B58 766 aa10.69□□□□□ -0.7
FDPS-218ENST00000492887 SLIT3O75094 1523 aa10.68□□□□□ -0.7
FDPS-218ENST00000492887 COL3A1P02461 1466 aaPredicted RBP10.68□□□□□ -0.7
FDPS-218ENST00000492887 PXDNQ92626 1479 aa10.68□□□□□ -0.7
FDPS-218ENST00000492887 BLMP54132 1417 aaPredicted RBP10.68□□□□□ -0.7
FDPS-218ENST00000492887 SMG6Q86US8 1419 aaKnown RBP10.68□□□□□ -0.7
FDPS-218ENST00000492887 SBNO1A3KN83 1393 aa10.68□□□□□ -0.7
FDPS-218ENST00000492887 DIAPH1O60610 1272 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms