RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 RALGAPBQ86X10 1494 aa13.62□□□□□ -0.23
CSMD3-206ENST00000492692 ZNF853P0CG23 659 aa13.62□□□□□ -0.23
CSMD3-206ENST00000492692 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
CSMD3-206ENST00000492692 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
CSMD3-206ENST00000492692 CTIFO43310 598 aaKnown RBP13.61□□□□□ -0.23
CSMD3-206ENST00000492692 CASC1Q6TDU7 716 aa13.61□□□□□ -0.23
CSMD3-206ENST00000492692 SGSM3Q96HU1 749 aa13.61□□□□□ -0.23
CSMD3-206ENST00000492692 DAPK1P53355 1430 aa13.61□□□□□ -0.23
CSMD3-206ENST00000492692 MUM1L1Q5H9M0 696 aa13.6□□□□□ -0.23
CSMD3-206ENST00000492692 TDO2P48775 406 aa13.6□□□□□ -0.23
CSMD3-206ENST00000492692 RAD51AP2Q09MP3 1159 aa13.6□□□□□ -0.23
CSMD3-206ENST00000492692 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
CSMD3-206ENST00000492692 TBC1D32Q96NH3 1257 aa13.6□□□□□ -0.23
CSMD3-206ENST00000492692 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
CSMD3-206ENST00000492692 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
CSMD3-206ENST00000492692 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
CSMD3-206ENST00000492692 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
CSMD3-206ENST00000492692 REC8O95072 547 aa13.59□□□□□ -0.23
CSMD3-206ENST00000492692 DDIT3P35638 169 aa13.59□□□□□ -0.23
CSMD3-206ENST00000492692 SWT1Q5T5J6 900 aaKnown RBP13.59□□□□□ -0.23
CSMD3-206ENST00000492692 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
CSMD3-206ENST00000492692 CTNNA3Q9UI47 895 aa13.59□□□□□ -0.23
CSMD3-206ENST00000492692 CHIC2Q9UKJ5 165 aa13.59□□□□□ -0.23
CSMD3-206ENST00000492692 CCDC189A1A4V9 331 aa13.58□□□□□ -0.24
CSMD3-206ENST00000492692 CASQ1P31415 396 aa13.58□□□□□ -0.24
CSMD3-206ENST00000492692 ITFG2Q969R8 447 aa13.58□□□□□ -0.24
CSMD3-206ENST00000492692 DNAJC5Q9H3Z4 198 aa13.58□□□□□ -0.24
CSMD3-206ENST00000492692 KNSTRNQ9Y448 316 aa13.58□□□□□ -0.24
CSMD3-206ENST00000492692 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
CSMD3-206ENST00000492692 PZPP20742 1482 aa13.58□□□□□ -0.24
CSMD3-206ENST00000492692 GAPVD1Q14C86 1478 aa13.58□□□□□ -0.24
CSMD3-206ENST00000492692 PPP1R12AO14974 1030 aaPredicted RBP13.57□□□□□ -0.24
CSMD3-206ENST00000492692 GSCP56915 257 aaPredicted RBP13.57□□□□□ -0.24
CSMD3-206ENST00000492692 TRDNQ13061 729 aa13.57□□□□□ -0.24
CSMD3-206ENST00000492692 DIAPH3Q9NSV4 1193 aa13.57□□□□□ -0.24
CSMD3-206ENST00000492692 FAM53CQ9NYF3 392 aa13.57□□□□□ -0.24
CSMD3-206ENST00000492692 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
CSMD3-206ENST00000492692 EPRSP07814 1512 aaKnown RBP13.57□□□□□ -0.24
CSMD3-206ENST00000492692 GOLGA6L6A8MZA4 724 aa13.57□□□□□ -0.24
CSMD3-206ENST00000492692 RPAINQ86UA6 219 aa13.57□□□□□ -0.24
CSMD3-206ENST00000492692 FAM210AQ96ND0 272 aa13.57□□□□□ -0.24
CSMD3-206ENST00000492692 MAPK8IP3Q9UPT6 1336 aa13.57□□□□□ -0.24
CSMD3-206ENST00000492692 ADGBQ8N7X0 1667 aa13.57□□□□□ -0.24
CSMD3-206ENST00000492692 C11orf91Q3C1V1 193 aa13.56□□□□□ -0.24
CSMD3-206ENST00000492692 CCDC91Q7Z6B0 441 aa13.56□□□□□ -0.24
CSMD3-206ENST00000492692 SKAP1Q86WV1 359 aa13.56□□□□□ -0.24
CSMD3-206ENST00000492692 KRT222Q8N1A0 295 aa13.56□□□□□ -0.24
CSMD3-206ENST00000492692 PIBF1Q8WXW3 757 aa13.56□□□□□ -0.24
CSMD3-206ENST00000492692 SPTLC3Q9NUV7 552 aa13.56□□□□□ -0.24
CSMD3-206ENST00000492692 STK26Q9P289 416 aa13.56□□□□□ -0.24
CSMD3-206ENST00000492692 KLHL33A6NCF5 533 aa13.55□□□□□ -0.24
CSMD3-206ENST00000492692 CYP2C19P33261 490 aa13.55□□□□□ -0.24
CSMD3-206ENST00000492692 KLHL40Q2TBA0 621 aa13.55□□□□□ -0.24
CSMD3-206ENST00000492692 CLEC17AQ6ZS10 378 aa13.55□□□□□ -0.24
CSMD3-206ENST00000492692 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
CSMD3-206ENST00000492692 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
CSMD3-206ENST00000492692 KCNA4P22459 653 aa13.55□□□□□ -0.24
CSMD3-206ENST00000492692 FKBP5Q13451 457 aaPredicted RBP13.55□□□□□ -0.24
CSMD3-206ENST00000492692 CXorf56Q9H5V9 222 aa13.55□□□□□ -0.24
CSMD3-206ENST00000492692 ABCC5O15440 1437 aa13.55□□□□□ -0.24
CSMD3-206ENST00000492692 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
CSMD3-206ENST00000492692 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
CSMD3-206ENST00000492692 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
CSMD3-206ENST00000492692 SUFUQ9UMX1 484 aa13.53□□□□□ -0.24
CSMD3-206ENST00000492692 UHRF1BP1LA0JNW5 1464 aa13.53□□□□□ -0.24
CSMD3-206ENST00000492692 HNRNPH2P55795 449 aaKnown RBP13.53□□□□□ -0.24
CSMD3-206ENST00000492692 GOLGA6L1Q8N7Z2 621 aa13.53□□□□□ -0.24
CSMD3-206ENST00000492692 LRCH2Q5VUJ6 765 aa13.52□□□□□ -0.25
CSMD3-206ENST00000492692 MPNDQ8N594 471 aa13.52□□□□□ -0.25
CSMD3-206ENST00000492692 NBPF3Q9H094 633 aa13.52□□□□□ -0.25
CSMD3-206ENST00000492692 WDR62O43379 1518 aa13.52□□□□□ -0.25
CSMD3-206ENST00000492692 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
CSMD3-206ENST00000492692 TSC1Q92574 1164 aa13.51□□□□□ -0.25
CSMD3-206ENST00000492692 ADGRL2O95490 1459 aa13.51□□□□□ -0.25
CSMD3-206ENST00000492692 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
CSMD3-206ENST00000492692 BORCS6Q96GS4 357 aa13.5□□□□□ -0.25
CSMD3-206ENST00000492692 JRKLQ9Y4A0 524 aa13.5□□□□□ -0.25
CSMD3-206ENST00000492692 MRVI1Q9Y6F6 885 aa13.5□□□□□ -0.25
CSMD3-206ENST00000492692 GOLGA6L22H0YM25 854 aa13.5□□□□□ -0.25
CSMD3-206ENST00000492692 ARID4AP29374 1257 aaPredicted RBP13.5□□□□□ -0.25
CSMD3-206ENST00000492692 RAB3GAP1Q15042 981 aa13.5□□□□□ -0.25
CSMD3-206ENST00000492692 LIG1P18858 919 aa13.49□□□□□ -0.25
CSMD3-206ENST00000492692 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
CSMD3-206ENST00000492692 SUGP1Q8IWZ8 645 aaKnown RBP13.49□□□□□ -0.25
CSMD3-206ENST00000492692 KIF18AQ8NI77 898 aa13.49□□□□□ -0.25
CSMD3-206ENST00000492692 KANK1Q14678 1352 aa13.49□□□□□ -0.25
CSMD3-206ENST00000492692 MTA1Q13330 715 aa13.48□□□□□ -0.25
CSMD3-206ENST00000492692 TNPO1Q92973 898 aaKnown RBP13.48□□□□□ -0.25
CSMD3-206ENST00000492692 A0A1B0GUL7 405 aa13.48□□□□□ -0.25
CSMD3-206ENST00000492692 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
CSMD3-206ENST00000492692 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
CSMD3-206ENST00000492692 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
CSMD3-206ENST00000492692 TBC1D22AQ8WUA7 517 aa13.48□□□□□ -0.25
CSMD3-206ENST00000492692 JARID2Q92833 1246 aaPredicted RBP13.48□□□□□ -0.25
CSMD3-206ENST00000492692 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
CSMD3-206ENST00000492692 CROCC2H7BZ55 1655 aa13.47□□□□□ -0.25
CSMD3-206ENST00000492692 PLEKHD1A6NEE1 506 aa13.47□□□□□ -0.25
CSMD3-206ENST00000492692 ANKRD23Q86SG2 305 aa13.47□□□□□ -0.25
CSMD3-206ENST00000492692 MKL1Q969V6 931 aa13.47□□□□□ -0.25
CSMD3-206ENST00000492692 DEF6Q9H4E7 631 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms