RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 STRCQ7RTU9 1775 aa4.94□□□□□ -1.62
SNX13-209ENST00000492626 MTMR2Q13614 643 aa4.94□□□□□ -1.62
SNX13-209ENST00000492626 KMT5BQ4FZB7 885 aa4.94□□□□□ -1.62
SNX13-209ENST00000492626 REREQ9P2R6 1566 aa4.94□□□□□ -1.62
SNX13-209ENST00000492626 PCDHB15Q9Y5E8 787 aa4.94□□□□□ -1.62
SNX13-209ENST00000492626 FHAD1B1AJZ9 1412 aa4.94□□□□□ -1.62
SNX13-209ENST00000492626 MFAP1P55081 439 aaKnown RBP4.93□□□□□ -1.62
SNX13-209ENST00000492626 EIF4G2P78344 907 aaKnown RBP eCLIP4.93□□□□□ -1.62
SNX13-209ENST00000492626 RTL5Q5HYW3 569 aaPredicted RBP4.93□□□□□ -1.62
SNX13-209ENST00000492626 SLF2Q8IX21 1173 aa4.93□□□□□ -1.62
SNX13-209ENST00000492626 EYA1Q99502 592 aa4.93□□□□□ -1.62
SNX13-209ENST00000492626 LHX6Q9UPM6 363 aa4.93□□□□□ -1.62
SNX13-209ENST00000492626 MAGI2Q86UL8 1455 aa4.93□□□□□ -1.62
SNX13-209ENST00000492626 ZNF142P52746 1687 aaPredicted RBP4.93□□□□□ -1.62
SNX13-209ENST00000492626 KCNA1Q09470 495 aa4.93□□□□□ -1.62
SNX13-209ENST00000492626 KCNK17Q96T54 332 aa4.93□□□□□ -1.62
SNX13-209ENST00000492626 SYNMO15061 1565 aa4.93□□□□□ -1.62
SNX13-209ENST00000492626 SMAPO00193 183 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 MROH2AA6NES4 1674 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 HOXA2O43364 376 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 ZNF592Q92610 1267 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 TSKSQ9UJT2 592 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 MADDQ8WXG6 1647 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 POM121CA8CG34 1229 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 BRD1O95696 1058 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 LMOD1P29536 600 aaPredicted RBP4.92□□□□□ -1.62
SNX13-209ENST00000492626 GCGRP47871 477 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 CCDC88BA6NC98 1476 aa4.92□□□□□ -1.62
SNX13-209ENST00000492626 KHSRPQ92945 711 aaKnown RBP eCLIP4.91□□□□□ -1.622e-6■■■□□ 17.9
SNX13-209ENST00000492626 FANCAO15360 1455 aa4.91□□□□□ -1.62
SNX13-209ENST00000492626 NEO1Q92859 1461 aa4.91□□□□□ -1.62
SNX13-209ENST00000492626 FAM69CQ0P6D2 419 aa4.91□□□□□ -1.62
SNX13-209ENST00000492626 KDM5BQ9UGL1 1544 aa4.91□□□□□ -1.62
SNX13-209ENST00000492626 POTEFA5A3E0 1075 aa4.91□□□□□ -1.62
SNX13-209ENST00000492626 COL9A1P20849 921 aa4.91□□□□□ -1.62
SNX13-209ENST00000492626 VAC14Q08AM6 782 aa4.91□□□□□ -1.62
SNX13-209ENST00000492626 RIMS1Q86UR5 1692 aaKnown RBP4.91□□□□□ -1.62
SNX13-209ENST00000492626 SETD1BQ9UPS6 1966 aaKnown RBP4.91□□□□□ -1.62
SNX13-209ENST00000492626 EFCAB5A4FU69 1503 aa4.9□□□□□ -1.62
SNX13-209ENST00000492626 AQRO60306 1485 aaKnown RBP eCLIP4.9□□□□□ -1.62
SNX13-209ENST00000492626 Q3C1V9 767 aa4.9□□□□□ -1.62
SNX13-209ENST00000492626 CHMP7Q8WUX9 453 aaPredicted RBP4.9□□□□□ -1.62
SNX13-209ENST00000492626 PPP1R12CQ9BZL4 782 aa4.9□□□□□ -1.62
SNX13-209ENST00000492626 NBPF3Q9H094 633 aa4.9□□□□□ -1.62
SNX13-209ENST00000492626 PLA2R1Q13018 1463 aa4.9□□□□□ -1.63
SNX13-209ENST00000492626 SWT1Q5T5J6 900 aaKnown RBP4.9□□□□□ -1.63
SNX13-209ENST00000492626 STAC3Q96MF2 364 aa4.9□□□□□ -1.63
SNX13-209ENST00000492626 FAM198AQ9UFP1 575 aa4.9□□□□□ -1.63
SNX13-209ENST00000492626 PRR14Q9BWN1 585 aa4.89□□□□□ -1.63
SNX13-209ENST00000492626 KIAA1468Q9P260 1216 aa4.89□□□□□ -1.63
SNX13-209ENST00000492626 SOGA1O94964 1423 aa4.89□□□□□ -1.63
SNX13-209ENST00000492626 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.89□□□□□ -1.63
SNX13-209ENST00000492626 RBM25P49756 843 aaKnown RBP4.89□□□□□ -1.63
SNX13-209ENST00000492626 CTDSPL2Q05D32 466 aa4.89□□□□□ -1.63
SNX13-209ENST00000492626 CCDC27Q2M243 656 aa4.89□□□□□ -1.63
SNX13-209ENST00000492626 FAM135AQ9P2D6 1515 aa4.89□□□□□ -1.63
SNX13-209ENST00000492626 KIF14Q15058 1648 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 E9PSI1 815 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 ATP6V1AP38606 617 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 KDM5CP41229 1560 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 CUL7Q14999 1698 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 KIAA0556O60303 1618 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 GPR153Q6NV75 609 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 VRTNQ9H8Y1 702 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 RBM19Q9Y4C8 960 aaKnown RBP4.88□□□□□ -1.63
SNX13-209ENST00000492626 PTPRKQ15262 1439 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 CFHP08603 1231 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 PROX2Q3B8N5 592 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 BCL11AQ9H165 835 aa4.88□□□□□ -1.63
SNX13-209ENST00000492626 NHSL1Q5SYE7 1610 aa4.87□□□□□ -1.63
SNX13-209ENST00000492626 ARHGEF12Q9NZN5 1544 aa4.87□□□□□ -1.63
SNX13-209ENST00000492626 PALM3A6NDB9 673 aaPredicted RBP4.87□□□□□ -1.63
SNX13-209ENST00000492626 GOLGA8CPA6NN73 597 aa4.87□□□□□ -1.63
SNX13-209ENST00000492626 IRF5Q13568 498 aa4.87□□□□□ -1.63
SNX13-209ENST00000492626 CDCA8Q53HL2 280 aa4.87□□□□□ -1.63
SNX13-209ENST00000492626 PRR7Q8TB68 274 aa4.87□□□□□ -1.63
SNX13-209ENST00000492626 LRRN4Q8WUT4 740 aa4.87□□□□□ -1.63
SNX13-209ENST00000492626 MTMR7Q9Y216 660 aa4.87□□□□□ -1.63
SNX13-209ENST00000492626 FAM98CQ17RN3 349 aaKnown RBP4.87□□□□□ -1.63
SNX13-209ENST00000492626 SEPT9Q9UHD8 586 aaPredicted RBP4.87□□□□□ -1.63
SNX13-209ENST00000492626 RABGEF1Q9UJ41 708 aa4.87□□□□□ -1.63
SNX13-209ENST00000492626 CCER1Q8TC90 406 aaPredicted RBP4.86□□□□□ -1.63
SNX13-209ENST00000492626 TFIP11Q9UBB9 837 aaKnown RBP4.86□□□□□ -1.63
SNX13-209ENST00000492626 SETD1AO15047 1707 aaKnown RBP4.86□□□□□ -1.63
SNX13-209ENST00000492626 GUCA2AQ02747 115 aa4.86□□□□□ -1.63
SNX13-209ENST00000492626 FUT2Q10981 343 aa4.86□□□□□ -1.63
SNX13-209ENST00000492626 RETREG3Q86VR2 466 aa4.86□□□□□ -1.63
SNX13-209ENST00000492626 RNF17Q9BXT8 1623 aaKnown RBP4.85□□□□□ -1.63
SNX13-209ENST00000492626 HOXB3P14651 431 aaPredicted RBP4.85□□□□□ -1.63
SNX13-209ENST00000492626 IVNS1ABPQ9Y6Y0 642 aa4.85□□□□□ -1.63
SNX13-209ENST00000492626 ABCA9Q8IUA7 1624 aa4.85□□□□□ -1.63
SNX13-209ENST00000492626 GJD4Q96KN9 370 aaPredicted RBP4.85□□□□□ -1.63
SNX13-209ENST00000492626 CTHP32929 405 aa4.84□□□□□ -1.63
SNX13-209ENST00000492626 LARP1Q6PKG0 1096 aaKnown RBP4.84□□□□□ -1.63
SNX13-209ENST00000492626 HMX1Q9NP08 348 aaPredicted RBP4.84□□□□□ -1.63
SNX13-209ENST00000492626 NR1H3Q13133 447 aa4.84□□□□□ -1.63
SNX13-209ENST00000492626 ERBB3P21860 1342 aa4.84□□□□□ -1.63
SNX13-209ENST00000492626 PRG4Q92954 1404 aaPredicted RBP4.84□□□□□ -1.63
SNX13-209ENST00000492626 ZCCHC11Q5TAX3 1644 aaKnown RBP4.84□□□□□ -1.64
SNX13-209ENST00000492626 ATG7O95352 703 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms