RNA–Protein interactions for RNA: ENST00000492622.6

FNDC3A-204, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,286 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-204ENST00000492622 RNF20Q5VTR2 975 aa10.42□□□□□ -0.74
FNDC3A-204ENST00000492622 OSCARQ8IYS5 282 aa10.42□□□□□ -0.74
FNDC3A-204ENST00000492622 RBM33Q96EV2 1170 aaKnown RBP10.42□□□□□ -0.74
FNDC3A-204ENST00000492622 DHX16O60231 1041 aaKnown RBP10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 TRIM29Q14134 588 aa10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 MCM10Q7L590 875 aa10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 RAPGEF4Q8WZA2 1011 aa10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 CCDC34Q96HJ3 373 aa10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 MYL6BP14649 208 aa10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 GOLGA6L1Q8N7Z2 621 aa10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 ESCO1Q5FWF5 840 aa10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 NCAPD3P42695 1498 aa10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 CLASRPQ8N2M8 674 aaKnown RBP10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 CCDC85AQ96PX6 553 aaPredicted RBP10.41□□□□□ -0.74
FNDC3A-204ENST00000492622 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.74
FNDC3A-204ENST00000492622 ERC2O15083 957 aa10.4□□□□□ -0.74
FNDC3A-204ENST00000492622 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.4□□□□□ -0.74
FNDC3A-204ENST00000492622 POLA1P09884 1462 aaPredicted RBP10.4□□□□□ -0.74
FNDC3A-204ENST00000492622 TRDNQ13061 729 aa10.4□□□□□ -0.74
FNDC3A-204ENST00000492622 SDF4Q9BRK5 362 aa10.4□□□□□ -0.74
FNDC3A-204ENST00000492622 TRIM5Q9C035 493 aa10.4□□□□□ -0.74
FNDC3A-204ENST00000492622 PCF11O94913 1555 aaKnown RBP10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 VPS37DQ86XT2 251 aa10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 PDILTQ8N807 584 aa10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 UPF3BQ9BZI7 483 aaKnown RBP10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 NSD3Q9BZ95 1437 aa10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 MCM4P33991 863 aa10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 CNTROBQ8N137 903 aa10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 SSH1Q8WYL5 1049 aa10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 GRPEL1Q9HAV7 217 aa10.4□□□□□ -0.75
FNDC3A-204ENST00000492622 TOP2BQ02880 1626 aa10.39□□□□□ -0.75
FNDC3A-204ENST00000492622 CCDC73Q6ZRK6 1079 aa10.39□□□□□ -0.75
FNDC3A-204ENST00000492622 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
FNDC3A-204ENST00000492622 K7ELQ4 463 aaPredicted RBP10.39□□□□□ -0.75
FNDC3A-204ENST00000492622 GNAI2P04899 355 aa10.39□□□□□ -0.75
FNDC3A-204ENST00000492622 TMPOP42166 694 aaKnown RBP10.39□□□□□ -0.75
FNDC3A-204ENST00000492622 CWC27Q6UX04 472 aaKnown RBP10.39□□□□□ -0.75
FNDC3A-204ENST00000492622 CCDC30Q5VVM6 783 aa10.39□□□□□ -0.75
FNDC3A-204ENST00000492622 PATL2C9JE40 543 aaKnown RBP10.38□□□□□ -0.75
FNDC3A-204ENST00000492622 IGHDP01880 384 aa10.38□□□□□ -0.75
FNDC3A-204ENST00000492622 RRP12Q5JTH9 1297 aaKnown RBP10.38□□□□□ -0.75
FNDC3A-204ENST00000492622 CPLX2Q6PUV4 134 aaKnown RBP10.38□□□□□ -0.75
FNDC3A-204ENST00000492622 F6X3S4 739 aa10.38□□□□□ -0.75
FNDC3A-204ENST00000492622 TSHZ3Q63HK5 1081 aa10.38□□□□□ -0.75
FNDC3A-204ENST00000492622 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
FNDC3A-204ENST00000492622 RALYLQ86SE5 291 aaKnown RBP10.38□□□□□ -0.75
FNDC3A-204ENST00000492622 GRIN2BQ13224 1484 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 TSPY26PQ9H489 355 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 USHBP1Q8N6Y0 703 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 GNAI3P08754 354 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 RARSP54136 660 aaKnown RBP10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 RABEP1Q15276 862 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 FERMT3Q86UX7 667 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 GCC1Q96CN9 775 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 ANKRD30BQ9BXX2 1392 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 STRN4Q9NRL3 753 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 TOPBP1Q92547 1522 aa10.37□□□□□ -0.75
FNDC3A-204ENST00000492622 SKIDA1Q1XH10 827 aa10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 TMX4Q9H1E5 349 aaPredicted RBP10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 PPFIA3O75145 1194 aa10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 BRPF1P55201 1214 aaPredicted RBP10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 LRRCC1Q9C099 1032 aa10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 TNNQ9UQP3 1299 aa10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 TROQ12816 1431 aaPredicted RBP10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 SMC2O95347 1197 aa10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 SRGAP3O43295 1099 aa10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 WDR63Q8IWG1 891 aa10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 SYNJ2O15056 1496 aa10.36□□□□□ -0.75
FNDC3A-204ENST00000492622 SYCE3A1L190 88 aa10.35□□□□□ -0.75
FNDC3A-204ENST00000492622 EMILIN1Q9Y6C2 1016 aa10.35□□□□□ -0.75
FNDC3A-204ENST00000492622 HSP90AB4PQ58FF6 505 aa10.35□□□□□ -0.75
FNDC3A-204ENST00000492622 FAM177A1Q8N128 213 aaPredicted RBP10.35□□□□□ -0.75
FNDC3A-204ENST00000492622 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
FNDC3A-204ENST00000492622 CCDC39Q9UFE4 941 aa10.35□□□□□ -0.75
FNDC3A-204ENST00000492622 ADGRF5Q8IZF2 1346 aa10.35□□□□□ -0.75
FNDC3A-204ENST00000492622 TBC1D2Q9BYX2 928 aa10.35□□□□□ -0.75
FNDC3A-204ENST00000492622 DUSP27Q5VZP5 1158 aa10.35□□□□□ -0.75
FNDC3A-204ENST00000492622 NME9Q86XW9 330 aa10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 SSFA2P28290 1259 aa10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 CAMK4Q16566 473 aa10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 EPRSP07814 1512 aaKnown RBP10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 SNAPC4Q5SXM2 1469 aa10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 FAM83GA6ND36 823 aa10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 ZNF530Q6P9A1 599 aaPredicted RBP10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 TPM1P09493 284 aa10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 AACSQ86V21 672 aa10.34□□□□□ -0.75
FNDC3A-204ENST00000492622 PLB1Q6P1J6 1458 aa10.33□□□□□ -0.76
FNDC3A-204ENST00000492622 DISP3Q9P2K9 1392 aa10.33□□□□□ -0.76
FNDC3A-204ENST00000492622 NINLQ9Y2I6 1382 aa10.33□□□□□ -0.76
FNDC3A-204ENST00000492622 GAS2L2Q8NHY3 880 aa10.33□□□□□ -0.76
FNDC3A-204ENST00000492622 JAKMIP1Q96N16 626 aaKnown RBP10.33□□□□□ -0.76
FNDC3A-204ENST00000492622 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
FNDC3A-204ENST00000492622 MNS1Q8NEH6 495 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms