RNA–Protein interactions for RNA: ENST00000492526.5

SLTM-208, Transcript of SAFB like transcription modulator, human

TSL 2

Gene SLTM, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-208	ENST00000492526	NCOA1	Q15788	1441 aa		10.2	□□□□□ -0.78
SLTM-208	ENST00000492526	MYO5C	Q9NQX4	1742 aa		10.2	□□□□□ -0.78
SLTM-208	ENST00000492526	ZNF692	Q9BU19	519 aa	Predicted RBP	10.2	□□□□□ -0.78
SLTM-208	ENST00000492526	RSPH14	Q9UHP6	348 aa		10.2	□□□□□ -0.78
SLTM-208	ENST00000492526	GABPB1	Q06547	395 aa	Predicted RBP	10.19	□□□□□ -0.78
SLTM-208	ENST00000492526	TNPO1	Q92973	898 aa	Known RBP	10.19	□□□□□ -0.78
SLTM-208	ENST00000492526	TBC1D32	Q96NH3	1257 aa		10.18	□□□□□ -0.78
SLTM-208	ENST00000492526	NOP2	P46087	812 aa	Known RBP	10.18	□□□□□ -0.78
SLTM-208	ENST00000492526	GTF2A1	P52655	376 aa	Predicted RBP	10.18	□□□□□ -0.78
SLTM-208	ENST00000492526	SMC4	Q9NTJ3	1288 aa		10.18	□□□□□ -0.78
SLTM-208	ENST00000492526	SYCP2	Q9BX26	1530 aa		10.18	□□□□□ -0.78
SLTM-208	ENST00000492526	CCDC172	P0C7W6	258 aa		10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	TERF2	Q15554	542 aa		10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	RBSN	Q9H1K0	784 aa		10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	OGFR	Q9NZT2	677 aa		10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	CALCOCO1	Q9P1Z2	691 aa		10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	DENND4B	O75064	1496 aa	Predicted RBP	10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	KIF7	Q2M1P5	1343 aa		10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	VIRMA	Q69YN4	1812 aa	Known RBP	10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	YEATS2	Q9ULM3	1422 aa		10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	BRPF1	P55201	1214 aa	Predicted RBP	10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	HMGN5	P82970	282 aa	Known RBP	10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	C17orf53	Q8N3J3	647 aa	Predicted RBP	10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	PRIMPOL	Q96LW4	560 aa		10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	NCAPG	Q9BPX3	1015 aa		10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.17	□□□□□ -0.78
SLTM-208	ENST00000492526	SPAG9	O60271	1321 aa	Known RBP	10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	FGD6	Q6ZV73	1430 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	GYS2	P54840	703 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	NBPF9	Q3BBW0	867 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	UPF2	Q9HAU5	1272 aa	Known RBP	10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	TOMM22	Q9NS69	142 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	RRP7BP	Q9NSQ0	103 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	RAI14	Q9P0K7	980 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	SAMD9L	Q8IVG5	1584 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	PREX2	Q70Z35	1606 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	MAFG	O15525	162 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	DHX16	O60231	1041 aa	Known RBP	10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	TSPY4	P0CV99	314 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	TSPY10	P0CW01	314 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	CC2D2B	Q6DHV5	1058 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	CAMSAP2	Q08AD1	1489 aa		10.16	□□□□□ -0.78
SLTM-208	ENST00000492526	NEO1	Q92859	1461 aa		10.15	□□□□□ -0.78
SLTM-208	ENST00000492526	MCM5	P33992	734 aa		10.15	□□□□□ -0.78
SLTM-208	ENST00000492526	DHX29	Q7Z478	1369 aa	Known RBP	10.15	□□□□□ -0.78
SLTM-208	ENST00000492526	TNNT1	P13805	278 aa		10.15	□□□□□ -0.78
SLTM-208	ENST00000492526	DNAJC21	Q5F1R6	531 aa	Known RBP	10.15	□□□□□ -0.78
SLTM-208	ENST00000492526	RAD51AP2	Q09MP3	1159 aa		10.15	□□□□□ -0.79
SLTM-208	ENST00000492526	KIAA2012	Q0VF49	1180 aa		10.15	□□□□□ -0.79
SLTM-208	ENST00000492526	ANKRD7	Q92527	254 aa		10.15	□□□□□ -0.79
SLTM-208	ENST00000492526	FEZ1	Q99689	392 aa		10.15	□□□□□ -0.79
SLTM-208	ENST00000492526	ARID4A	P29374	1257 aa	Predicted RBP	10.14	□□□□□ -0.79
SLTM-208	ENST00000492526	SSR1	P43307	286 aa	Known RBP	10.13	□□□□□ -0.79
SLTM-208	ENST00000492526	HNRNPH2	P55795	449 aa	Known RBP	10.13	□□□□□ -0.79
SLTM-208	ENST00000492526	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.13	□□□□□ -0.79
SLTM-208	ENST00000492526	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
SLTM-208	ENST00000492526	NINL	Q9Y2I6	1382 aa		10.13	□□□□□ -0.79
SLTM-208	ENST00000492526	POGZ	Q7Z3K3	1410 aa		10.13	□□□□□ -0.79
SLTM-208	ENST00000492526	CCDC39	Q9UFE4	941 aa		10.13	□□□□□ -0.79
SLTM-208	ENST00000492526	RBM25	P49756	843 aa	Known RBP	10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	TERF2IP	Q9NYB0	399 aa		10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	ARAP3	Q8WWN8	1544 aa		10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	IGHD	P01880	384 aa		10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	HSP90AB1	P08238	724 aa	Known RBP	10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	PLCB2	Q00722	1185 aa		10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	SGSM3	Q96HU1	749 aa		10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	LRPPRC	P42704	1394 aa	Known RBP	10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	MBD5	Q9P267	1494 aa		10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	GGT6	Q6P531	493 aa		10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	CTNNA3	Q9UI47	895 aa		10.12	□□□□□ -0.79
SLTM-208	ENST00000492526	ABCC1	P33527	1531 aa		10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	DDIT3	P35638	169 aa		10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	PRIM1	P49642	420 aa	Known RBP	10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	OTUD6B	Q8N6M0	293 aa		10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	GBP4	Q96PP9	640 aa		10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	DDX49	Q9Y6V7	483 aa	Known RBP	10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	MFAP1	P55081	439 aa	Known RBP	10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	ICE2	Q659A1	982 aa		10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	ZNF518A	Q6AHZ1	1483 aa		10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	PTPN23	Q9H3S7	1636 aa		10.11	□□□□□ -0.79
SLTM-208	ENST00000492526	SRPK2	P78362	688 aa	Known RBP	10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	NBPF10	Q6P3W6	841 aa	Known RBP	10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	ST7	Q9NRC1	585 aa		10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	ITSN2	Q9NZM3	1697 aa		10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	FRMPD1	Q5SYB0	1578 aa		10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	MIA2	Q96PC5	1412 aa		10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	RIOK3	O14730	519 aa	Known RBP	10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	NBPF6	Q5VWK0	638 aa		10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	NBPF4	Q96M43	638 aa		10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	PTPRK	Q15262	1439 aa		10.1	□□□□□ -0.79
SLTM-208	ENST00000492526	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
SLTM-208	ENST00000492526	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.09	□□□□□ -0.79	5e-7	■■■■□ 19.7
SLTM-208	ENST00000492526	DDX41	Q9UJV9	622 aa	Known RBP	10.09	□□□□□ -0.79
SLTM-208	ENST00000492526	TDO2	P48775	406 aa		10.09	□□□□□ -0.79
SLTM-208	ENST00000492526	CAVIN1	Q6NZI2	390 aa	Known RBP	10.09	□□□□□ -0.79
SLTM-208	ENST00000492526	FAM212A	Q96EL1	285 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms