RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 ST20-MTHFSA0A0A6YYL1 179 aa19.45■□□□□ 0.7
PTPN7-215ENST00000492451 ATRNO75882 1429 aa19.44■□□□□ 0.7
PTPN7-215ENST00000492451 UPF1Q92900 1129 aaKnown RBP eCLIP19.44■□□□□ 0.7
PTPN7-215ENST00000492451 ACEP12821 1306 aa19.44■□□□□ 0.7
PTPN7-215ENST00000492451 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
PTPN7-215ENST00000492451 ATAD2Q6PL18 1390 aa19.44■□□□□ 0.7
PTPN7-215ENST00000492451 MARF1Q9Y4F3 1742 aaKnown RBP19.43■□□□□ 0.7
PTPN7-215ENST00000492451 TRPM3Q9HCF6 1732 aaPredicted RBP19.42■□□□□ 0.7
PTPN7-215ENST00000492451 PUS7Q96PZ0 661 aaKnown RBP19.42■□□□□ 0.7
PTPN7-215ENST00000492451 TESK2Q96S53 571 aa19.42■□□□□ 0.7
PTPN7-215ENST00000492451 CABP1Q9NZU7 370 aa19.42■□□□□ 0.7
PTPN7-215ENST00000492451 TRPC5Q9UL62 973 aaPredicted RBP19.42■□□□□ 0.7
PTPN7-215ENST00000492451 LMOD2Q6P5Q4 547 aa19.41■□□□□ 0.7
PTPN7-215ENST00000492451 SLIT2O94813 1529 aa19.41■□□□□ 0.7
PTPN7-215ENST00000492451 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
PTPN7-215ENST00000492451 BRD4O60885 1362 aaPredicted RBP19.39■□□□□ 0.69
PTPN7-215ENST00000492451 ABCA3Q99758 1704 aa19.39■□□□□ 0.69
PTPN7-215ENST00000492451 ALS2Q96Q42 1657 aa19.38■□□□□ 0.69
PTPN7-215ENST00000492451 TMF1P82094 1093 aa19.37■□□□□ 0.69
PTPN7-215ENST00000492451 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
PTPN7-215ENST00000492451 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
PTPN7-215ENST00000492451 CDCA8Q53HL2 280 aa19.35■□□□□ 0.69
PTPN7-215ENST00000492451 UNC5CLQ8IV45 518 aa19.35■□□□□ 0.69
PTPN7-215ENST00000492451 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.69
PTPN7-215ENST00000492451 GJD4Q96KN9 370 aaPredicted RBP19.34■□□□□ 0.69
PTPN7-215ENST00000492451 GLI3P10071 1580 aa19.34■□□□□ 0.69
PTPN7-215ENST00000492451 USP6P35125 1406 aa19.34■□□□□ 0.69
PTPN7-215ENST00000492451 FAM83GA6ND36 823 aa19.33■□□□□ 0.68
PTPN7-215ENST00000492451 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.33■□□□□ 0.68
PTPN7-215ENST00000492451 NINLQ9Y2I6 1382 aa19.32■□□□□ 0.68
PTPN7-215ENST00000492451 AKAP12Q02952 1782 aa19.32■□□□□ 0.68
PTPN7-215ENST00000492451 TMC1Q8TDI8 760 aa19.32■□□□□ 0.68
PTPN7-215ENST00000492451 ABTB2Q8N961 1025 aa19.31■□□□□ 0.68
PTPN7-215ENST00000492451 CPSF1Q10570 1443 aaKnown RBP19.31■□□□□ 0.68
PTPN7-215ENST00000492451 CRYBG1Q9Y4K1 1723 aa19.31■□□□□ 0.68
PTPN7-215ENST00000492451 PLCH1Q4KWH8 1693 aa19.3■□□□□ 0.68
PTPN7-215ENST00000492451 HDGFL2Q7Z4V5 671 aaPredicted RBP19.3■□□□□ 0.68
PTPN7-215ENST00000492451 TERF2IPQ9NYB0 399 aa19.3■□□□□ 0.68
PTPN7-215ENST00000492451 KTN1Q86UP2 1357 aaKnown RBP19.3■□□□□ 0.68
PTPN7-215ENST00000492451 SLC12A5Q9H2X9 1139 aa19.29■□□□□ 0.68
PTPN7-215ENST00000492451 SSH2Q76I76 1423 aa19.28■□□□□ 0.68
PTPN7-215ENST00000492451 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
PTPN7-215ENST00000492451 NUTM2GQ5VZR2 741 aa19.28■□□□□ 0.68
PTPN7-215ENST00000492451 NLRP13Q86W25 1043 aa19.28■□□□□ 0.68
PTPN7-215ENST00000492451 TTC21AQ8NDW8 1320 aa19.27■□□□□ 0.68
PTPN7-215ENST00000492451 VPS72Q15906 364 aa19.27■□□□□ 0.68
PTPN7-215ENST00000492451 MON2Q7Z3U7 1717 aa19.27■□□□□ 0.68
PTPN7-215ENST00000492451 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
PTPN7-215ENST00000492451 TTC21BQ7Z4L5 1316 aa19.25■□□□□ 0.67
PTPN7-215ENST00000492451 NWD2Q9ULI1 1742 aa19.25■□□□□ 0.67
PTPN7-215ENST00000492451 BTG4Q9NY30 223 aa19.25■□□□□ 0.67
PTPN7-215ENST00000492451 NRAPQ86VF7 1730 aa19.25■□□□□ 0.67
PTPN7-215ENST00000492451 NRKQ7Z2Y5 1582 aa19.24■□□□□ 0.67
PTPN7-215ENST00000492451 PHRF1Q9P1Y6 1649 aaKnown RBP19.24■□□□□ 0.67
PTPN7-215ENST00000492451 USP19O94966 1318 aa19.24■□□□□ 0.67
PTPN7-215ENST00000492451 NLRP6P59044 892 aa19.23■□□□□ 0.67
PTPN7-215ENST00000492451 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
PTPN7-215ENST00000492451 A0A1W2PP64 1363 aa19.22■□□□□ 0.67
PTPN7-215ENST00000492451 PIK3C2AO00443 1686 aa19.22■□□□□ 0.67
PTPN7-215ENST00000492451 COL14A1Q05707 1796 aaKnown RBP19.21■□□□□ 0.67
PTPN7-215ENST00000492451 KIAA0232Q92628 1395 aa19.21■□□□□ 0.67
PTPN7-215ENST00000492451 CHRNA2Q15822 529 aa19.21■□□□□ 0.67
PTPN7-215ENST00000492451 SEPT12Q8IYM1 358 aa19.21■□□□□ 0.67
PTPN7-215ENST00000492451 CCDC9Q9Y3X0 531 aaKnown RBP19.21■□□□□ 0.67
PTPN7-215ENST00000492451 EP400Q96L91 3159 aa19.21■□□□□ 0.67
PTPN7-215ENST00000492451 ANKRD36BQ8N2N9 1353 aa19.2■□□□□ 0.66
PTPN7-215ENST00000492451 ONECUT3O60422 494 aaPredicted RBP19.2■□□□□ 0.66
PTPN7-215ENST00000492451 GCP02774 474 aa19.19■□□□□ 0.66
PTPN7-215ENST00000492451 ZC3H6P61129 1189 aaKnown RBP19.19■□□□□ 0.66
PTPN7-215ENST00000492451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
PTPN7-215ENST00000492451 PRDM11Q9NQV5 511 aa19.19■□□□□ 0.66
PTPN7-215ENST00000492451 BRWD3Q6RI45 1802 aa19.18■□□□□ 0.66
PTPN7-215ENST00000492451 CPDO75976 1380 aa19.18■□□□□ 0.66
PTPN7-215ENST00000492451 SLIT3O75094 1523 aa19.17■□□□□ 0.66
PTPN7-215ENST00000492451 KCNH5Q8NCM2 988 aa19.17■□□□□ 0.66
PTPN7-215ENST00000492451 USP31Q70CQ4 1352 aa19.17■□□□□ 0.66
PTPN7-215ENST00000492451 FAM98CQ17RN3 349 aaKnown RBP19.16■□□□□ 0.66
PTPN7-215ENST00000492451 MYOM1P52179 1685 aa19.16■□□□□ 0.66
PTPN7-215ENST00000492451 USP54Q70EL1 1684 aa19.15■□□□□ 0.66
PTPN7-215ENST00000492451 SPATA31A5Q5VU36 1347 aa19.15■□□□□ 0.66
PTPN7-215ENST00000492451 SPATA31A7Q8IWB4 1347 aa19.15■□□□□ 0.66
PTPN7-215ENST00000492451 NME9Q86XW9 330 aa19.14■□□□□ 0.65
PTPN7-215ENST00000492451 POLR3GLQ9BT43 218 aa19.14■□□□□ 0.65
PTPN7-215ENST00000492451 CAMTA1Q9Y6Y1 1673 aa19.12■□□□□ 0.65
PTPN7-215ENST00000492451 KRT27Q7Z3Y8 459 aa19.11■□□□□ 0.65
PTPN7-215ENST00000492451 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
PTPN7-215ENST00000492451 SPATA31A1Q5TZJ5 1347 aa19.1■□□□□ 0.65
PTPN7-215ENST00000492451 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
PTPN7-215ENST00000492451 LMO7Q8WWI1 1683 aa19.1■□□□□ 0.65
PTPN7-215ENST00000492451 THSD7AQ9UPZ6 1657 aa19.09■□□□□ 0.65
PTPN7-215ENST00000492451 A0A0G2JS52 829 aa19.09■□□□□ 0.65
PTPN7-215ENST00000492451 MYT1Q01538 1121 aa19.09■□□□□ 0.65
PTPN7-215ENST00000492451 FAM182BQ5T319 152 aa19.09■□□□□ 0.65
PTPN7-215ENST00000492451 COG3Q96JB2 828 aa19.09■□□□□ 0.65
PTPN7-215ENST00000492451 OVOS2A0A0J9YW53 1432 aa19.08■□□□□ 0.65
PTPN7-215ENST00000492451 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.65
PTPN7-215ENST00000492451 OVOS2Q6IE36 1432 aa19.08■□□□□ 0.65
PTPN7-215ENST00000492451 AATKQ6ZMQ8 1374 aa19.08■□□□□ 0.65
PTPN7-215ENST00000492451 C11orf95C9JLR9 678 aaPredicted RBP19.08■□□□□ 0.64
PTPN7-215ENST00000492451 NFAT5O94916 1531 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms