RNA–Protein interactions for RNA: ENST00000492367.1

NUCB1-212, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 1,515 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-212ENST00000492367 C1orf167Q5SNV9 1468 aa25.67■■□□□ 1.7
NUCB1-212ENST00000492367 GGNBP2Q9H3C7 697 aa25.67■■□□□ 1.7
NUCB1-212ENST00000492367 TTC21BQ7Z4L5 1316 aa25.66■■□□□ 1.7
NUCB1-212ENST00000492367 ESCO1Q5FWF5 840 aa25.66■■□□□ 1.7
NUCB1-212ENST00000492367 MST1RQ04912 1400 aa25.66■■□□□ 1.7
NUCB1-212ENST00000492367 YTHDC1Q96MU7 727 aaKnown RBP25.65■■□□□ 1.7
NUCB1-212ENST00000492367 SSH2Q76I76 1423 aa25.64■■□□□ 1.7
NUCB1-212ENST00000492367 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
NUCB1-212ENST00000492367 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
NUCB1-212ENST00000492367 COG3Q96JB2 828 aa25.62■■□□□ 1.69
NUCB1-212ENST00000492367 NME9Q86XW9 330 aa25.6■■□□□ 1.69
NUCB1-212ENST00000492367 FAM9BQ8IZU0 186 aa25.59■■□□□ 1.69
NUCB1-212ENST00000492367 TNNT2P45379 298 aaPredicted RBP25.58■■□□□ 1.68
NUCB1-212ENST00000492367 PNISRQ8TF01 805 aaKnown RBP25.58■■□□□ 1.68
NUCB1-212ENST00000492367 USP54Q70EL1 1684 aa25.57■■□□□ 1.68
NUCB1-212ENST00000492367 PSME1Q06323 249 aa25.57■■□□□ 1.68
NUCB1-212ENST00000492367 CFAP53Q96M91 514 aa25.57■■□□□ 1.68
NUCB1-212ENST00000492367 ORAI2Q96SN7 254 aa25.57■■□□□ 1.68
NUCB1-212ENST00000492367 OVOS2A0A0J9YW53 1432 aa25.56■■□□□ 1.68
NUCB1-212ENST00000492367 OVOS2Q6IE36 1432 aa25.56■■□□□ 1.68
NUCB1-212ENST00000492367 USP31Q70CQ4 1352 aa25.55■■□□□ 1.68
NUCB1-212ENST00000492367 PIK3C2AO00443 1686 aa25.55■■□□□ 1.68
NUCB1-212ENST00000492367 LTBP4Q8N2S1 1624 aa25.55■■□□□ 1.68
NUCB1-212ENST00000492367 AATKQ6ZMQ8 1374 aa25.54■■□□□ 1.68
NUCB1-212ENST00000492367 CENPBP07199 599 aaPredicted RBP25.53■■□□□ 1.68
NUCB1-212ENST00000492367 INSRP06213 1382 aa25.52■■□□□ 1.68
NUCB1-212ENST00000492367 MTHFSP49914 203 aa25.51■■□□□ 1.67
NUCB1-212ENST00000492367 WDR43Q15061 677 aaKnown RBP eCLIP25.51■■□□□ 1.67
NUCB1-212ENST00000492367 PAK3O75914 559 aaPredicted RBP25.5■■□□□ 1.67
NUCB1-212ENST00000492367 TRPM3Q9HCF6 1732 aaPredicted RBP25.5■■□□□ 1.67
NUCB1-212ENST00000492367 MAP2P11137 1827 aaKnown RBP25.5■■□□□ 1.67
NUCB1-212ENST00000492367 NPHP3Q7Z494 1330 aa25.5■■□□□ 1.67
NUCB1-212ENST00000492367 FOXO3O43524 673 aa25.49■■□□□ 1.67
NUCB1-212ENST00000492367 SMG6Q86US8 1419 aaKnown RBP25.48■■□□□ 1.67
NUCB1-212ENST00000492367 ABTB2Q8N961 1025 aa25.47■■□□□ 1.67
NUCB1-212ENST00000492367 ZRANB1Q9UGI0 708 aa25.47■■□□□ 1.67
NUCB1-212ENST00000492367 KRT28Q7Z3Y7 464 aa25.47■■□□□ 1.67
NUCB1-212ENST00000492367 SLAIN2Q9P270 581 aa25.47■■□□□ 1.67
NUCB1-212ENST00000492367 NLRP6P59044 892 aa25.46■■□□□ 1.67
NUCB1-212ENST00000492367 CDK12Q9NYV4 1490 aaPredicted RBP25.45■■□□□ 1.66
NUCB1-212ENST00000492367 SHPRHQ149N8 1683 aa25.44■■□□□ 1.66
NUCB1-212ENST00000492367 HNRNPUQ00839 825 aaKnown RBP eCLIP25.44■■□□□ 1.66
NUCB1-212ENST00000492367 MARF1Q9Y4F3 1742 aaKnown RBP25.44■■□□□ 1.66
NUCB1-212ENST00000492367 SBNO1A3KN83 1393 aa25.43■■□□□ 1.66
NUCB1-212ENST00000492367 POLKQ9UBT6 870 aa25.42■■□□□ 1.66
NUCB1-212ENST00000492367 BRINP3Q76B58 766 aa25.42■■□□□ 1.66
NUCB1-212ENST00000492367 ALS2Q96Q42 1657 aa25.41■■□□□ 1.66
NUCB1-212ENST00000492367 NUDCQ9Y266 331 aa25.41■■□□□ 1.66
NUCB1-212ENST00000492367 PNPLA6Q8IY17 1366 aa25.41■■□□□ 1.66
NUCB1-212ENST00000492367 BLMP54132 1417 aaPredicted RBP25.4■■□□□ 1.66
NUCB1-212ENST00000492367 COL3A1P02461 1466 aaPredicted RBP25.4■■□□□ 1.66
NUCB1-212ENST00000492367 PXDNQ92626 1479 aa25.39■■□□□ 1.65
NUCB1-212ENST00000492367 XPCQ01831 940 aaPredicted RBP25.38■■□□□ 1.65
NUCB1-212ENST00000492367 TNS3Q68CZ2 1445 aa25.37■■□□□ 1.65
NUCB1-212ENST00000492367 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
NUCB1-212ENST00000492367 KIF24Q5T7B8 1368 aa25.37■■□□□ 1.65
NUCB1-212ENST00000492367 PPM1GO15355 546 aaPredicted RBP25.37■■□□□ 1.65
NUCB1-212ENST00000492367 KCNH5Q8NCM2 988 aa25.37■■□□□ 1.65
NUCB1-212ENST00000492367 ADAMTS8Q9UP79 889 aa25.37■■□□□ 1.65
NUCB1-212ENST00000492367 EMILIN1Q9Y6C2 1016 aa25.37■■□□□ 1.65
NUCB1-212ENST00000492367 DIAPH1O60610 1272 aaKnown RBP25.36■■□□□ 1.65
NUCB1-212ENST00000492367 NUTM2GQ5VZR2 741 aa25.36■■□□□ 1.65
NUCB1-212ENST00000492367 SLIT3O75094 1523 aa25.35■■□□□ 1.65
NUCB1-212ENST00000492367 ARHGEF10O15013 1369 aa25.34■■□□□ 1.65
NUCB1-212ENST00000492367 RRS1Q15050 365 aaKnown RBP25.34■■□□□ 1.65
NUCB1-212ENST00000492367 LMOD2Q6P5Q4 547 aa25.34■■□□□ 1.65
NUCB1-212ENST00000492367 ZBED9Q6R2W3 1325 aa25.33■■□□□ 1.65
NUCB1-212ENST00000492367 IQSEC2Q5JU85 1478 aa25.33■■□□□ 1.65
NUCB1-212ENST00000492367 USP19O94966 1318 aa25.32■■□□□ 1.64
NUCB1-212ENST00000492367 FBLN1P23142 703 aa25.32■■□□□ 1.64
NUCB1-212ENST00000492367 FLT4P35916 1363 aa25.31■■□□□ 1.64
NUCB1-212ENST00000492367 NFAT5O94916 1531 aa25.31■■□□□ 1.64
NUCB1-212ENST00000492367 SOS2Q07890 1332 aaPredicted RBP25.31■■□□□ 1.64
NUCB1-212ENST00000492367 SOX12O15370 315 aa25.31■■□□□ 1.64
NUCB1-212ENST00000492367 RTL1A6NKG5 1358 aa25.3■■□□□ 1.64
NUCB1-212ENST00000492367 ROBO1Q9Y6N7 1651 aa25.3■■□□□ 1.64
NUCB1-212ENST00000492367 SPATA31A3Q5VYP0 1347 aa25.3■■□□□ 1.64
NUCB1-212ENST00000492367 LTN1O94822 1766 aa25.3■■□□□ 1.64
NUCB1-212ENST00000492367 PEAK1Q9H792 1746 aa25.3■■□□□ 1.64
NUCB1-212ENST00000492367 MAP3K19Q56UN5 1328 aa25.29■■□□□ 1.64
NUCB1-212ENST00000492367 MED1Q15648 1581 aaPredicted RBP25.29■■□□□ 1.64
NUCB1-212ENST00000492367 DDX17Q92841 729 aaKnown RBP25.29■■□□□ 1.64
NUCB1-212ENST00000492367 AMPHP49418 695 aa25.28■■□□□ 1.64
NUCB1-212ENST00000492367 PNNQ9H307 717 aaKnown RBP25.28■■□□□ 1.64
NUCB1-212ENST00000492367 PHRF1Q9P1Y6 1649 aaKnown RBP25.28■■□□□ 1.64
NUCB1-212ENST00000492367 U2SURPO15042 1029 aaKnown RBP25.27■■□□□ 1.64
NUCB1-212ENST00000492367 U2AF1L5P0DN76 240 aaPredicted RBP25.27■■□□□ 1.64
NUCB1-212ENST00000492367 U2AF1Q01081 240 aaKnown RBP eCLIP25.27■■□□□ 1.64
NUCB1-212ENST00000492367 AHDC1Q5TGY3 1603 aaPredicted RBP25.26■■□□□ 1.63
NUCB1-212ENST00000492367 TOM1O60784 492 aa25.26■■□□□ 1.63
NUCB1-212ENST00000492367 GCP02774 474 aa25.24■■□□□ 1.63
NUCB1-212ENST00000492367 NGEFQ8N5V2 710 aa25.24■■□□□ 1.63
NUCB1-212ENST00000492367 IL13P35225 146 aa25.23■■□□□ 1.63
NUCB1-212ENST00000492367 RUNDC1Q96C34 613 aa25.23■■□□□ 1.63
NUCB1-212ENST00000492367 CRYBG1Q9Y4K1 1723 aa25.23■■□□□ 1.63
NUCB1-212ENST00000492367 NEFMP07197 916 aa25.2■■□□□ 1.62
NUCB1-212ENST00000492367 HOXC9P31274 260 aa25.2■■□□□ 1.62
NUCB1-212ENST00000492367 CCDC146Q8IYE0 955 aa25.2■■□□□ 1.62
NUCB1-212ENST00000492367 FCHSD2O94868 740 aa25.19■■□□□ 1.62
NUCB1-212ENST00000492367 EIF4A2Q14240 407 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms