RNA–Protein interactions for RNA: ENST00000492314.3

PBX3-210, Transcript of PBX homeobox 3, human

Gene PBX3, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBX3-210	ENST00000492314	ANKAR	Q7Z5J8	1434 aa		13.73	□□□□□ -0.21
PBX3-210	ENST00000492314	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.73	□□□□□ -0.21
PBX3-210	ENST00000492314	ADGRB2	O60241	1585 aa		13.72	□□□□□ -0.21
PBX3-210	ENST00000492314	DLC1	Q96QB1	1528 aa		13.72	□□□□□ -0.21
PBX3-210	ENST00000492314	BAG6	P46379	1132 aa		13.71	□□□□□ -0.21
PBX3-210	ENST00000492314	ALS2	Q96Q42	1657 aa		13.71	□□□□□ -0.21
PBX3-210	ENST00000492314	THSD7A	Q9UPZ6	1657 aa		13.7	□□□□□ -0.22
PBX3-210	ENST00000492314	HAP1	P54257	671 aa	Predicted RBP	13.7	□□□□□ -0.22
PBX3-210	ENST00000492314	MPHOSPH9	Q99550	1183 aa		13.7	□□□□□ -0.22
PBX3-210	ENST00000492314	COL14A1	Q05707	1796 aa	Known RBP	13.7	□□□□□ -0.22
PBX3-210	ENST00000492314	DHX57	Q6P158	1386 aa	Known RBP	13.7	□□□□□ -0.22
PBX3-210	ENST00000492314	PSD	A5PKW4	1024 aa	Predicted RBP	13.69	□□□□□ -0.22
PBX3-210	ENST00000492314	CCDC9	Q9Y3X0	531 aa	Known RBP	13.69	□□□□□ -0.22
PBX3-210	ENST00000492314	RGPD1	P0DJD0	1748 aa		13.69	□□□□□ -0.22
PBX3-210	ENST00000492314	CRYBG1	Q9Y4K1	1723 aa		13.69	□□□□□ -0.22
PBX3-210	ENST00000492314	SPATA31A5	Q5VU36	1347 aa		13.68	□□□□□ -0.22
PBX3-210	ENST00000492314	SPATA31A7	Q8IWB4	1347 aa		13.68	□□□□□ -0.22
PBX3-210	ENST00000492314	TNS1	Q9HBL0	1735 aa	Known RBP	13.68	□□□□□ -0.22
PBX3-210	ENST00000492314	FAM98C	Q17RN3	349 aa	Known RBP	13.68	□□□□□ -0.22
PBX3-210	ENST00000492314	CFAP70	Q5T0N1	1121 aa		13.68	□□□□□ -0.22
PBX3-210	ENST00000492314	PRAM1	Q96QH2	718 aa		13.68	□□□□□ -0.22
PBX3-210	ENST00000492314	ADGRB1	O14514	1584 aa		13.67	□□□□□ -0.22
PBX3-210	ENST00000492314	ATXN8OS	P0DMR3	200 aa		13.67	□□□□□ -0.22
PBX3-210	ENST00000492314	BTG4	Q9NY30	223 aa		13.67	□□□□□ -0.22
PBX3-210	ENST00000492314	EN1	Q05925	392 aa	Predicted RBP	13.66	□□□□□ -0.22
PBX3-210	ENST00000492314	PRR36	Q9H6K5	1346 aa		13.65	□□□□□ -0.22
PBX3-210	ENST00000492314	LMOD2	Q6P5Q4	547 aa		13.65	□□□□□ -0.22
PBX3-210	ENST00000492314	PMFBP1	Q8TBY8	1022 aa		13.65	□□□□□ -0.22
PBX3-210	ENST00000492314	ACIN1	Q9UKV3	1341 aa	Known RBP	13.64	□□□□□ -0.23
PBX3-210	ENST00000492314	CAMKK2	Q96RR4	588 aa		13.64	□□□□□ -0.23
PBX3-210	ENST00000492314	TULP4	Q9NRJ4	1543 aa		13.64	□□□□□ -0.23
PBX3-210	ENST00000492314	GPRASP1	Q5JY77	1395 aa		13.63	□□□□□ -0.23
PBX3-210	ENST00000492314	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PBX3-210	ENST00000492314	R3HDM1	Q15032	1099 aa	Known RBP	13.63	□□□□□ -0.23
PBX3-210	ENST00000492314	EIF3A	Q14152	1382 aa	Known RBP	13.62	□□□□□ -0.23
PBX3-210	ENST00000492314	PLEKHG5	O94827	1062 aa		13.62	□□□□□ -0.23
PBX3-210	ENST00000492314	FAM182B	Q5T319	152 aa		13.62	□□□□□ -0.23
PBX3-210	ENST00000492314	SPATA31A1	Q5TZJ5	1347 aa		13.62	□□□□□ -0.23
PBX3-210	ENST00000492314	PARD3	Q8TEW0	1356 aa		13.61	□□□□□ -0.23
PBX3-210	ENST00000492314		A0A0G2JS52	829 aa		13.61	□□□□□ -0.23
PBX3-210	ENST00000492314	MYT1	Q01538	1121 aa		13.61	□□□□□ -0.23
PBX3-210	ENST00000492314	RAB3GAP2	Q9H2M9	1393 aa		13.6	□□□□□ -0.23
PBX3-210	ENST00000492314	EZH2	Q15910	746 aa	Known RBP	13.6	□□□□□ -0.23
PBX3-210	ENST00000492314	POGK	Q9P215	609 aa		13.6	□□□□□ -0.23
PBX3-210	ENST00000492314	WASL	O00401	505 aa	Predicted RBP	13.59	□□□□□ -0.23
PBX3-210	ENST00000492314	FAM196A	Q6ZSG2	479 aa		13.59	□□□□□ -0.23
PBX3-210	ENST00000492314	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.58	□□□□□ -0.24
PBX3-210	ENST00000492314	PRDM11	Q9NQV5	511 aa		13.58	□□□□□ -0.24
PBX3-210	ENST00000492314	RREB1	Q92766	1687 aa		13.58	□□□□□ -0.24
PBX3-210	ENST00000492314	KIAA0232	Q92628	1395 aa		13.58	□□□□□ -0.24
PBX3-210	ENST00000492314	ATP7B	P35670	1465 aa		13.57	□□□□□ -0.24
PBX3-210	ENST00000492314	TRIM37	O94972	964 aa		13.56	□□□□□ -0.24
PBX3-210	ENST00000492314	BARGIN	Q6ZT62	677 aa		13.56	□□□□□ -0.24
PBX3-210	ENST00000492314	TRAK1	Q9UPV9	953 aa		13.56	□□□□□ -0.24
PBX3-210	ENST00000492314	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.56	□□□□□ -0.24
PBX3-210	ENST00000492314	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.56	□□□□□ -0.24
PBX3-210	ENST00000492314	NUP188	Q5SRE5	1749 aa		13.55	□□□□□ -0.24
PBX3-210	ENST00000492314	NGDN	Q8NEJ9	315 aa	Known RBP	13.54	□□□□□ -0.24
PBX3-210	ENST00000492314	POLR3A	O14802	1390 aa	Predicted RBP	13.54	□□□□□ -0.24
PBX3-210	ENST00000492314	SSH2	Q76I76	1423 aa		13.54	□□□□□ -0.24
PBX3-210	ENST00000492314	LMO7	Q8WWI1	1683 aa		13.53	□□□□□ -0.24
PBX3-210	ENST00000492314	ITSN1	Q15811	1721 aa		13.53	□□□□□ -0.24
PBX3-210	ENST00000492314	APBA3	O96018	575 aa		13.53	□□□□□ -0.24
PBX3-210	ENST00000492314	CHRNA2	Q15822	529 aa		13.53	□□□□□ -0.24
PBX3-210	ENST00000492314	STAC3	Q96MF2	364 aa		13.53	□□□□□ -0.24
PBX3-210	ENST00000492314	CPD	O75976	1380 aa		13.53	□□□□□ -0.24
PBX3-210	ENST00000492314	CAMTA1	Q9Y6Y1	1673 aa		13.53	□□□□□ -0.24
PBX3-210	ENST00000492314	PAK3	O75914	559 aa	Predicted RBP	13.52	□□□□□ -0.25
PBX3-210	ENST00000492314	NUDT16	Q96DE0	195 aa	Known RBP	13.52	□□□□□ -0.25
PBX3-210	ENST00000492314	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.52	□□□□□ -0.25
PBX3-210	ENST00000492314	TOPAZ1	Q8N9V7	1692 aa		13.51	□□□□□ -0.25
PBX3-210	ENST00000492314	NRK	Q7Z2Y5	1582 aa		13.51	□□□□□ -0.25
PBX3-210	ENST00000492314	USP19	O94966	1318 aa		13.51	□□□□□ -0.25
PBX3-210	ENST00000492314	PLEKHG3	A1L390	1219 aa		13.5	□□□□□ -0.25
PBX3-210	ENST00000492314	STRN4	Q9NRL3	753 aa		13.5	□□□□□ -0.25
PBX3-210	ENST00000492314	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.5	□□□□□ -0.25
PBX3-210	ENST00000492314	ZC3H6	P61129	1189 aa	Known RBP	13.49	□□□□□ -0.25
PBX3-210	ENST00000492314	TCP11L2	Q8N4U5	519 aa		13.49	□□□□□ -0.25
PBX3-210	ENST00000492314	PARP4	Q9UKK3	1724 aa	Known RBP	13.49	□□□□□ -0.25
PBX3-210	ENST00000492314	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.48	□□□□□ -0.25
PBX3-210	ENST00000492314	RGPD4	Q7Z3J3	1758 aa		13.48	□□□□□ -0.25
PBX3-210	ENST00000492314	NINL	Q9Y2I6	1382 aa		13.48	□□□□□ -0.25
PBX3-210	ENST00000492314	PEAK1	Q9H792	1746 aa		13.48	□□□□□ -0.25
PBX3-210	ENST00000492314	YY1	P25490	414 aa		13.48	□□□□□ -0.25
PBX3-210	ENST00000492314	NBPF8	Q3BBV2	869 aa		13.48	□□□□□ -0.25
PBX3-210	ENST00000492314	LARP1	Q6PKG0	1096 aa	Known RBP	13.48	□□□□□ -0.25
PBX3-210	ENST00000492314	THRAP3	Q9Y2W1	955 aa	Known RBP	13.48	□□□□□ -0.25
PBX3-210	ENST00000492314	ACE	P12821	1306 aa		13.47	□□□□□ -0.25
PBX3-210	ENST00000492314	PDE3B	Q13370	1112 aa		13.47	□□□□□ -0.25
PBX3-210	ENST00000492314	NBPF14	Q5TI25	921 aa		13.47	□□□□□ -0.25
PBX3-210	ENST00000492314	DCAF11	Q8TEB1	546 aa		13.47	□□□□□ -0.25
PBX3-210	ENST00000492314	CCDC61	Q9Y6R9	512 aa		13.47	□□□□□ -0.25
PBX3-210	ENST00000492314	C11orf95	C9JLR9	678 aa	Predicted RBP	13.46	□□□□□ -0.25
PBX3-210	ENST00000492314	NUTM2G	Q5VZR2	741 aa		13.46	□□□□□ -0.25
PBX3-210	ENST00000492314	CDK19	Q9BWU1	502 aa		13.46	□□□□□ -0.25
PBX3-210	ENST00000492314	SPON1	Q9HCB6	807 aa		13.46	□□□□□ -0.25
PBX3-210	ENST00000492314	USP35	Q9P2H5	1018 aa		13.46	□□□□□ -0.25
PBX3-210	ENST00000492314	COL5A2	P05997	1499 aa	Predicted RBP	13.46	□□□□□ -0.25
PBX3-210	ENST00000492314	KCNQ2	O43526	872 aa		13.45	□□□□□ -0.26
PBX3-210	ENST00000492314	EVA1C	P58658	441 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms