RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 SPATA31A3Q5VYP0 1347 aa32.19■■■□□ 2.74
SCN5A-213ENST00000491944 CCDC7Q96M83 1385 aa32.19■■■□□ 2.74
SCN5A-213ENST00000491944 ANKRD36BQ8N2N9 1353 aa32.18■■■□□ 2.74
SCN5A-213ENST00000491944 SHPRHQ149N8 1683 aa32.18■■■□□ 2.74
SCN5A-213ENST00000491944 WASHC2AQ641Q2 1341 aa32.17■■■□□ 2.74
SCN5A-213ENST00000491944 ALS2Q96Q42 1657 aa32.16■■■□□ 2.74
SCN5A-213ENST00000491944 NRKQ7Z2Y5 1582 aa32.16■■■□□ 2.74
SCN5A-213ENST00000491944 PNPLA6Q8IY17 1366 aa32.16■■■□□ 2.74
SCN5A-213ENST00000491944 BRD4O60885 1362 aaPredicted RBP32.15■■■□□ 2.74
SCN5A-213ENST00000491944 ARHGEF10O15013 1369 aa32.13■■■□□ 2.73
SCN5A-213ENST00000491944 EDC4Q6P2E9 1401 aaKnown RBP32.12■■■□□ 2.73
SCN5A-213ENST00000491944 SSH2Q76I76 1423 aa32.12■■■□□ 2.73
SCN5A-213ENST00000491944 TTC21BQ7Z4L5 1316 aa32.11■■■□□ 2.73
SCN5A-213ENST00000491944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.1■■■□□ 2.73
SCN5A-213ENST00000491944 PLEKHG5O94827 1062 aa32.09■■■□□ 2.73
SCN5A-213ENST00000491944 ABTB2Q8N961 1025 aa32.09■■■□□ 2.73
SCN5A-213ENST00000491944 COL22A1Q8NFW1 1626 aaPredicted RBP32.09■■■□□ 2.73
SCN5A-213ENST00000491944 NUTM2GQ5VZR2 741 aa32.08■■■□□ 2.73
SCN5A-213ENST00000491944 TTC21AQ8NDW8 1320 aa32.08■■■□□ 2.73
SCN5A-213ENST00000491944 PIK3C2AO00443 1686 aa32.07■■■□□ 2.72
SCN5A-213ENST00000491944 PANK3Q9H999 370 aa32.07■■■□□ 2.72
SCN5A-213ENST00000491944 SPATA31A6Q5VVP1 1343 aa32.04■■■□□ 2.72
SCN5A-213ENST00000491944 NSD3Q9BZ95 1437 aa32.04■■■□□ 2.72
SCN5A-213ENST00000491944 NUTM2BA6NNL0 878 aaPredicted RBP32.04■■■□□ 2.72
SCN5A-213ENST00000491944 NUTM2EB1AL46 878 aaPredicted RBP32.04■■■□□ 2.72
SCN5A-213ENST00000491944 NUTM2AQ8IVF1 878 aaPredicted RBP32.04■■■□□ 2.72
SCN5A-213ENST00000491944 CARD14Q9BXL6 1004 aa32.04■■■□□ 2.72
SCN5A-213ENST00000491944 NME9Q86XW9 330 aa32.01■■■□□ 2.71
SCN5A-213ENST00000491944 CABLES1Q8TDN4 633 aa32.01■■■□□ 2.71
SCN5A-213ENST00000491944 MED1Q15648 1581 aaPredicted RBP32.01■■■□□ 2.71
SCN5A-213ENST00000491944 ABCA3Q99758 1704 aa32.01■■■□□ 2.71
SCN5A-213ENST00000491944 HAP1P54257 671 aaPredicted RBP32■■■□□ 2.71
SCN5A-213ENST00000491944 NLRP6P59044 892 aa32■■■□□ 2.71
SCN5A-213ENST00000491944 NLRP13Q86W25 1043 aa31.99■■■□□ 2.71
SCN5A-213ENST00000491944 KIF20BQ96Q89 1820 aa31.98■■■□□ 2.71
SCN5A-213ENST00000491944 CRYBG1Q9Y4K1 1723 aa31.97■■■□□ 2.71
SCN5A-213ENST00000491944 LRP6O75581 1613 aa31.96■■■□□ 2.71
SCN5A-213ENST00000491944 PHRF1Q9P1Y6 1649 aaKnown RBP31.95■■■□□ 2.71
SCN5A-213ENST00000491944 ZRANB1Q9UGI0 708 aa31.95■■■□□ 2.71
SCN5A-213ENST00000491944 MARF1Q9Y4F3 1742 aaKnown RBP31.95■■■□□ 2.7
SCN5A-213ENST00000491944 ZNF316A6NFI3 1004 aaPredicted RBP31.94■■■□□ 2.7
SCN5A-213ENST00000491944 USP19O94966 1318 aa31.93■■■□□ 2.7
SCN5A-213ENST00000491944 CGNL1Q0VF96 1302 aa31.93■■■□□ 2.7
SCN5A-213ENST00000491944 USP54Q70EL1 1684 aa31.92■■■□□ 2.7
SCN5A-213ENST00000491944 USP31Q70CQ4 1352 aa31.92■■■□□ 2.7
SCN5A-213ENST00000491944 ADAMTS2O95450 1211 aa31.92■■■□□ 2.7
SCN5A-213ENST00000491944 KNSTRNQ9Y448 316 aa31.92■■■□□ 2.7
SCN5A-213ENST00000491944 MEX3CQ5U5Q3 659 aaKnown RBP31.91■■■□□ 2.7
SCN5A-213ENST00000491944 FYB1O15117 783 aa31.9■■■□□ 2.7
SCN5A-213ENST00000491944 GGNBP2Q9H3C7 697 aa31.9■■■□□ 2.7
SCN5A-213ENST00000491944 COG3Q96JB2 828 aa31.88■■■□□ 2.69
SCN5A-213ENST00000491944 SLIT3O75094 1523 aa31.88■■■□□ 2.69
SCN5A-213ENST00000491944 OVOS2A0A0J9YW53 1432 aa31.88■■■□□ 2.69
SCN5A-213ENST00000491944 OVOS2Q6IE36 1432 aa31.88■■■□□ 2.69
SCN5A-213ENST00000491944 SOX12O15370 315 aa31.86■■■□□ 2.69
SCN5A-213ENST00000491944 GCP02774 474 aa31.85■■■□□ 2.69
SCN5A-213ENST00000491944 DDX10Q13206 875 aaKnown RBP31.84■■■□□ 2.69
SCN5A-213ENST00000491944 PER1O15534 1290 aaPredicted RBP31.82■■■□□ 2.69
SCN5A-213ENST00000491944 ANKRD26Q9UPS8 1709 aa31.82■■■□□ 2.68
SCN5A-213ENST00000491944 ZC3H6P61129 1189 aaKnown RBP31.81■■■□□ 2.68
SCN5A-213ENST00000491944 KCNH5Q8NCM2 988 aa31.81■■■□□ 2.68
SCN5A-213ENST00000491944 C8orf37Q96NL8 207 aa31.81■■■□□ 2.68
SCN5A-213ENST00000491944 NFAT5O94916 1531 aa31.79■■■□□ 2.68
SCN5A-213ENST00000491944 NSD2O96028 1365 aa31.79■■■□□ 2.68
SCN5A-213ENST00000491944 KIAA0232Q92628 1395 aa31.79■■■□□ 2.68
SCN5A-213ENST00000491944 ZBTB7CA1YPR0 619 aa31.78■■■□□ 2.68
SCN5A-213ENST00000491944 AMER1Q5JTC6 1135 aaPredicted RBP31.78■■■□□ 2.68
SCN5A-213ENST00000491944 PRDM11Q9NQV5 511 aa31.78■■■□□ 2.68
SCN5A-213ENST00000491944 NGLY1Q96IV0 654 aa31.77■■■□□ 2.68
SCN5A-213ENST00000491944 CPDO75976 1380 aa31.75■■■□□ 2.67
SCN5A-213ENST00000491944 CNGB1Q14028 1251 aaPredicted RBP31.74■■■□□ 2.67
SCN5A-213ENST00000491944 COL14A1Q05707 1796 aaKnown RBP31.74■■■□□ 2.67
SCN5A-213ENST00000491944 LTN1O94822 1766 aa31.73■■■□□ 2.67
SCN5A-213ENST00000491944 FAM83GA6ND36 823 aa31.73■■■□□ 2.67
SCN5A-213ENST00000491944 CHRNA2Q15822 529 aa31.73■■■□□ 2.67
SCN5A-213ENST00000491944 CC2D1BQ5T0F9 858 aaKnown RBP31.73■■■□□ 2.67
SCN5A-213ENST00000491944 PLCH1Q4KWH8 1693 aa31.73■■■□□ 2.67
SCN5A-213ENST00000491944 PHF23Q9BUL5 403 aaPredicted RBP31.72■■■□□ 2.67
SCN5A-213ENST00000491944 MORC1Q86VD1 984 aa31.71■■■□□ 2.67
SCN5A-213ENST00000491944 AFF2P51816 1311 aa31.7■■■□□ 2.67
SCN5A-213ENST00000491944 FBLN1P23142 703 aa31.69■■■□□ 2.66
SCN5A-213ENST00000491944 TNNT2P45379 298 aaPredicted RBP31.69■■■□□ 2.66
SCN5A-213ENST00000491944 ARHGEF25Q86VW2 580 aa31.68■■■□□ 2.66
SCN5A-213ENST00000491944 NPC1L1Q9UHC9 1359 aa31.68■■■□□ 2.66
SCN5A-213ENST00000491944 NWD2Q9ULI1 1742 aa31.66■■■□□ 2.66
SCN5A-213ENST00000491944 SLIT2O94813 1529 aa31.65■■■□□ 2.66
SCN5A-213ENST00000491944 RRS1Q15050 365 aaKnown RBP31.65■■■□□ 2.66
SCN5A-213ENST00000491944 FNBP4Q8N3X1 1017 aaPredicted RBP31.65■■■□□ 2.66
SCN5A-213ENST00000491944 LMO7Q8WWI1 1683 aa31.64■■■□□ 2.66
SCN5A-213ENST00000491944 AATKQ6ZMQ8 1374 aa31.64■■■□□ 2.66
SCN5A-213ENST00000491944 BTG4Q9NY30 223 aa31.64■■■□□ 2.66
SCN5A-213ENST00000491944 MAP2P11137 1827 aaKnown RBP31.63■■■□□ 2.65
SCN5A-213ENST00000491944 COL18A1P39060 1754 aa31.63■■■□□ 2.65
SCN5A-213ENST00000491944 MAP3K19Q56UN5 1328 aa31.63■■■□□ 2.65
SCN5A-213ENST00000491944 USP21Q9UK80 565 aa31.63■■■□□ 2.65
SCN5A-213ENST00000491944 RGPD5Q99666 1765 aa31.62■■■□□ 2.65
SCN5A-213ENST00000491944 NRAPQ86VF7 1730 aa31.6■■■□□ 2.65
SCN5A-213ENST00000491944 AMPHP49418 695 aa31.6■■■□□ 2.65
SCN5A-213ENST00000491944 CAMTA1Q9Y6Y1 1673 aa31.6■■■□□ 2.65
SCN5A-213ENST00000491944 BCL9LQ86UU0 1499 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms