RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 HSPA5P11021 654 aaKnown RBP21.35■■□□□ 1.01
SS18L1-204ENST00000491916 PHF23Q9BUL5 403 aaPredicted RBP21.35■■□□□ 1.01
SS18L1-204ENST00000491916 PAK3O75914 559 aaPredicted RBP21.34■■□□□ 1.01
SS18L1-204ENST00000491916 MEX3CQ5U5Q3 659 aaKnown RBP21.34■■□□□ 1.01
SS18L1-204ENST00000491916 LMOD2Q6P5Q4 547 aa21.34■■□□□ 1.01
SS18L1-204ENST00000491916 POTEAQ6S8J7 498 aa21.34■■□□□ 1.01
SS18L1-204ENST00000491916 MARF1Q9Y4F3 1742 aaKnown RBP21.34■■□□□ 1.01
SS18L1-204ENST00000491916 BRD4O60885 1362 aaPredicted RBP21.34■■□□□ 1.01
SS18L1-204ENST00000491916 TMF1P82094 1093 aa21.33■■□□□ 1.01
SS18L1-204ENST00000491916 NRKQ7Z2Y5 1582 aa21.32■■□□□ 1
SS18L1-204ENST00000491916 EIF4G2P78344 907 aaKnown RBP eCLIP21.32■■□□□ 1
SS18L1-204ENST00000491916 ZNF692Q9BU19 519 aaPredicted RBP21.32■■□□□ 1
SS18L1-204ENST00000491916 C8orf37Q96NL8 207 aa21.31■■□□□ 1
SS18L1-204ENST00000491916 MON2Q7Z3U7 1717 aa21.31■■□□□ 1
SS18L1-204ENST00000491916 AFF2P51816 1311 aa21.3■■□□□ 1
SS18L1-204ENST00000491916 FNBP4Q8N3X1 1017 aaPredicted RBP21.3■■□□□ 1
SS18L1-204ENST00000491916 TTC21BQ7Z4L5 1316 aa21.29■■□□□ 1
SS18L1-204ENST00000491916 NUTM2GQ5VZR2 741 aa21.29■■□□□ 1
SS18L1-204ENST00000491916 TMC1Q8TDI8 760 aa21.29■■□□□ 1
SS18L1-204ENST00000491916 USP19O94966 1318 aa21.29■■□□□ 1
SS18L1-204ENST00000491916 PIK3C2AO00443 1686 aa21.28■■□□□ 1
SS18L1-204ENST00000491916 A0A1W2PP64 1363 aa21.28■■□□□ 1
SS18L1-204ENST00000491916 KTN1Q86UP2 1357 aaKnown RBP21.28■■□□□ 1
SS18L1-204ENST00000491916 PLEKHG5O94827 1062 aa21.28■■□□□ 1
SS18L1-204ENST00000491916 ABTB2Q8N961 1025 aa21.28■■□□□ 1
SS18L1-204ENST00000491916 NINLQ9Y2I6 1382 aa21.27■■□□□ 1
SS18L1-204ENST00000491916 PHRF1Q9P1Y6 1649 aaKnown RBP21.27■■□□□ 1
SS18L1-204ENST00000491916 NGLY1Q96IV0 654 aa21.27■■□□□ 1
SS18L1-204ENST00000491916 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
SS18L1-204ENST00000491916 SLIT2O94813 1529 aa21.26■□□□□ 0.99
SS18L1-204ENST00000491916 C11orf95C9JLR9 678 aaPredicted RBP21.26■□□□□ 0.99
SS18L1-204ENST00000491916 MYOM1P52179 1685 aa21.25■□□□□ 0.99
SS18L1-204ENST00000491916 FAM83GA6ND36 823 aa21.25■□□□□ 0.99
SS18L1-204ENST00000491916 ZNF772Q68DY9 489 aaPredicted RBP21.25■□□□□ 0.99
SS18L1-204ENST00000491916 CDCA8Q53HL2 280 aa21.23■□□□□ 0.99
SS18L1-204ENST00000491916 TTC21AQ8NDW8 1320 aa21.23■□□□□ 0.99
SS18L1-204ENST00000491916 EDC4Q6P2E9 1401 aaKnown RBP21.22■□□□□ 0.99
SS18L1-204ENST00000491916 NLRP13Q86W25 1043 aa21.22■□□□□ 0.99
SS18L1-204ENST00000491916 TERF2IPQ9NYB0 399 aa21.22■□□□□ 0.99
SS18L1-204ENST00000491916 ZRANB1Q9UGI0 708 aa21.22■□□□□ 0.99
SS18L1-204ENST00000491916 SLIT3O75094 1523 aa21.22■□□□□ 0.99
SS18L1-204ENST00000491916 ANKRD36BQ8N2N9 1353 aa21.22■□□□□ 0.99
SS18L1-204ENST00000491916 NLRP6P59044 892 aa21.21■□□□□ 0.99
SS18L1-204ENST00000491916 HDGFL2Q7Z4V5 671 aaPredicted RBP21.21■□□□□ 0.99
SS18L1-204ENST00000491916 GCP02774 474 aa21.2■□□□□ 0.98
SS18L1-204ENST00000491916 HAP1P54257 671 aaPredicted RBP21.2■□□□□ 0.98
SS18L1-204ENST00000491916 USP21Q9UK80 565 aa21.2■□□□□ 0.98
SS18L1-204ENST00000491916 USP31Q70CQ4 1352 aa21.2■□□□□ 0.98
SS18L1-204ENST00000491916 ATRNO75882 1429 aa21.2■□□□□ 0.98
SS18L1-204ENST00000491916 PLCH1Q4KWH8 1693 aa21.19■□□□□ 0.98
SS18L1-204ENST00000491916 USP54Q70EL1 1684 aa21.19■□□□□ 0.98
SS18L1-204ENST00000491916 NME9Q86XW9 330 aa21.19■□□□□ 0.98
SS18L1-204ENST00000491916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.19■□□□□ 0.98
SS18L1-204ENST00000491916 QTRT2Q9H974 415 aaKnown RBP21.19■□□□□ 0.98
SS18L1-204ENST00000491916 KIAA0232Q92628 1395 aa21.19■□□□□ 0.98
SS18L1-204ENST00000491916 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.18■□□□□ 0.98
SS18L1-204ENST00000491916 CARD14Q9BXL6 1004 aa21.18■□□□□ 0.98
SS18L1-204ENST00000491916 NWD2Q9ULI1 1742 aa21.18■□□□□ 0.98
SS18L1-204ENST00000491916 ZC3H6P61129 1189 aaKnown RBP21.17■□□□□ 0.98
SS18L1-204ENST00000491916 UNC5CLQ8IV45 518 aa21.17■□□□□ 0.98
SS18L1-204ENST00000491916 CPDO75976 1380 aa21.17■□□□□ 0.98
SS18L1-204ENST00000491916 COL14A1Q05707 1796 aaKnown RBP21.17■□□□□ 0.98
SS18L1-204ENST00000491916 NRAPQ86VF7 1730 aa21.15■□□□□ 0.98
SS18L1-204ENST00000491916 CHRNA2Q15822 529 aa21.14■□□□□ 0.97
SS18L1-204ENST00000491916 NFAT5O94916 1531 aa21.14■□□□□ 0.97
SS18L1-204ENST00000491916 OVOS2A0A0J9YW53 1432 aa21.13■□□□□ 0.97
SS18L1-204ENST00000491916 OVOS2Q6IE36 1432 aa21.13■□□□□ 0.97
SS18L1-204ENST00000491916 LMO7Q8WWI1 1683 aa21.13■□□□□ 0.97
SS18L1-204ENST00000491916 PRDM11Q9NQV5 511 aa21.13■□□□□ 0.97
SS18L1-204ENST00000491916 TRPC5Q9UL62 973 aaPredicted RBP21.13■□□□□ 0.97
SS18L1-204ENST00000491916 RXRBP28702 533 aa21.12■□□□□ 0.97
SS18L1-204ENST00000491916 BTG4Q9NY30 223 aa21.12■□□□□ 0.97
SS18L1-204ENST00000491916 COL18A1P39060 1754 aa21.12■□□□□ 0.97
SS18L1-204ENST00000491916 KIF7Q2M1P5 1343 aa21.11■□□□□ 0.97
SS18L1-204ENST00000491916 RBM6P78332 1123 aaKnown RBP21.11■□□□□ 0.97
SS18L1-204ENST00000491916 CAMTA1Q9Y6Y1 1673 aa21.11■□□□□ 0.97
SS18L1-204ENST00000491916 FYB1O15117 783 aa21.1■□□□□ 0.97
SS18L1-204ENST00000491916 VPS72Q15906 364 aa21.1■□□□□ 0.97
SS18L1-204ENST00000491916 ARHGEF25Q86VW2 580 aa21.1■□□□□ 0.97
SS18L1-204ENST00000491916 GLI3P10071 1580 aa21.1■□□□□ 0.97
SS18L1-204ENST00000491916 CDK12Q9NYV4 1490 aaPredicted RBP21.09■□□□□ 0.97
SS18L1-204ENST00000491916 GJD4Q96KN9 370 aaPredicted RBP21.09■□□□□ 0.97
SS18L1-204ENST00000491916 KCNH5Q8NCM2 988 aa21.08■□□□□ 0.97
SS18L1-204ENST00000491916 POLR3GLQ9BT43 218 aa21.08■□□□□ 0.97
SS18L1-204ENST00000491916 NSD3Q9BZ95 1437 aa21.07■□□□□ 0.96
SS18L1-204ENST00000491916 AXIN2Q9Y2T1 843 aa21.07■□□□□ 0.96
SS18L1-204ENST00000491916 AATKQ6ZMQ8 1374 aa21.07■□□□□ 0.96
SS18L1-204ENST00000491916 RGS12O14924 1447 aa21.06■□□□□ 0.96
SS18L1-204ENST00000491916 SOX12O15370 315 aa21.05■□□□□ 0.96
SS18L1-204ENST00000491916 PANK3Q9H999 370 aa21.05■□□□□ 0.96
SS18L1-204ENST00000491916 GGNBP2Q9H3C7 697 aa21.04■□□□□ 0.96
SS18L1-204ENST00000491916 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
SS18L1-204ENST00000491916 CCDC7Q96M83 1385 aa21.03■□□□□ 0.96
SS18L1-204ENST00000491916 FBLN1P23142 703 aa21.03■□□□□ 0.96
SS18L1-204ENST00000491916 KIF20BQ96Q89 1820 aa21.03■□□□□ 0.96
SS18L1-204ENST00000491916 SPATA31A5Q5VU36 1347 aa21.03■□□□□ 0.96
SS18L1-204ENST00000491916 SPATA31A7Q8IWB4 1347 aa21.03■□□□□ 0.96
SS18L1-204ENST00000491916 COL5A2P05997 1499 aaPredicted RBP21.02■□□□□ 0.96
SS18L1-204ENST00000491916 SOCS7O14512 581 aa21.02■□□□□ 0.96
SS18L1-204ENST00000491916 ONECUT3O60422 494 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms