RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 CARD11Q9BXL7 1154 aa12.71□□□□□ -0.37
COL6A4P1-203ENST00000491915 TONSLQ96HA7 1378 aa12.7□□□□□ -0.38
COL6A4P1-203ENST00000491915 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
COL6A4P1-203ENST00000491915 EVC2Q86UK5 1308 aa12.7□□□□□ -0.38
COL6A4P1-203ENST00000491915 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
COL6A4P1-203ENST00000491915 ABTB2Q8N961 1025 aa12.7□□□□□ -0.38
COL6A4P1-203ENST00000491915 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
COL6A4P1-203ENST00000491915 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
COL6A4P1-203ENST00000491915 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
COL6A4P1-203ENST00000491915 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
COL6A4P1-203ENST00000491915 CHRNA2Q15822 529 aa12.69□□□□□ -0.38
COL6A4P1-203ENST00000491915 PCGF6Q9BYE7 350 aa12.69□□□□□ -0.38
COL6A4P1-203ENST00000491915 ALS2Q96Q42 1657 aa12.68□□□□□ -0.38
COL6A4P1-203ENST00000491915 CCDC9Q9Y3X0 531 aaKnown RBP12.68□□□□□ -0.38
COL6A4P1-203ENST00000491915 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
COL6A4P1-203ENST00000491915 SEPT12Q8IYM1 358 aa12.67□□□□□ -0.38
COL6A4P1-203ENST00000491915 PRDM11Q9NQV5 511 aa12.67□□□□□ -0.38
COL6A4P1-203ENST00000491915 KIAA0232Q92628 1395 aa12.66□□□□□ -0.38
COL6A4P1-203ENST00000491915 QRICH2Q9H0J4 1663 aa12.65□□□□□ -0.38
COL6A4P1-203ENST00000491915 GCP02774 474 aa12.65□□□□□ -0.38
COL6A4P1-203ENST00000491915 NLRP6P59044 892 aa12.65□□□□□ -0.38
COL6A4P1-203ENST00000491915 NLRP13Q86W25 1043 aa12.65□□□□□ -0.38
COL6A4P1-203ENST00000491915 GLI3P10071 1580 aa12.64□□□□□ -0.39
COL6A4P1-203ENST00000491915 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
COL6A4P1-203ENST00000491915 SSH2Q76I76 1423 aa12.64□□□□□ -0.39
COL6A4P1-203ENST00000491915 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
COL6A4P1-203ENST00000491915 TESK2Q96S53 571 aa12.64□□□□□ -0.39
COL6A4P1-203ENST00000491915 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
COL6A4P1-203ENST00000491915 SLC12A5Q9H2X9 1139 aa12.64□□□□□ -0.39
COL6A4P1-203ENST00000491915 ITSN1Q15811 1721 aa12.64□□□□□ -0.39
COL6A4P1-203ENST00000491915 TTC21BQ7Z4L5 1316 aa12.63□□□□□ -0.39
COL6A4P1-203ENST00000491915 ABCA3Q99758 1704 aa12.63□□□□□ -0.39
COL6A4P1-203ENST00000491915 FAM98CQ17RN3 349 aaKnown RBP12.63□□□□□ -0.39
COL6A4P1-203ENST00000491915 ZRANB1Q9UGI0 708 aa12.63□□□□□ -0.39
COL6A4P1-203ENST00000491915 USP19O94966 1318 aa12.62□□□□□ -0.39
COL6A4P1-203ENST00000491915 SPATA31A5Q5VU36 1347 aa12.62□□□□□ -0.39
COL6A4P1-203ENST00000491915 SPATA31A7Q8IWB4 1347 aa12.62□□□□□ -0.39
COL6A4P1-203ENST00000491915 USP6P35125 1406 aa12.62□□□□□ -0.39
COL6A4P1-203ENST00000491915 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
COL6A4P1-203ENST00000491915 ATAD2Q6PL18 1390 aa12.61□□□□□ -0.39
COL6A4P1-203ENST00000491915 EVA1CP58658 441 aa12.61□□□□□ -0.39
COL6A4P1-203ENST00000491915 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
COL6A4P1-203ENST00000491915 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.61□□□□□ -0.39
COL6A4P1-203ENST00000491915 CRYBG1Q9Y4K1 1723 aa12.6□□□□□ -0.39
COL6A4P1-203ENST00000491915 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
COL6A4P1-203ENST00000491915 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
COL6A4P1-203ENST00000491915 KRT27Q7Z3Y8 459 aa12.6□□□□□ -0.39
COL6A4P1-203ENST00000491915 CPSF1Q10570 1443 aaKnown RBP12.6□□□□□ -0.39
COL6A4P1-203ENST00000491915 PLCH1Q4KWH8 1693 aa12.6□□□□□ -0.39
COL6A4P1-203ENST00000491915 SBNO2Q9Y2G9 1366 aa12.59□□□□□ -0.39
COL6A4P1-203ENST00000491915 ZBTB7CA1YPR0 619 aa12.59□□□□□ -0.39
COL6A4P1-203ENST00000491915 FAM182BQ5T319 152 aa12.59□□□□□ -0.39
COL6A4P1-203ENST00000491915 AXIN2Q9Y2T1 843 aa12.59□□□□□ -0.39
COL6A4P1-203ENST00000491915 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
COL6A4P1-203ENST00000491915 SPATA31A1Q5TZJ5 1347 aa12.59□□□□□ -0.39
COL6A4P1-203ENST00000491915 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.39
COL6A4P1-203ENST00000491915 CAMTA1Q9Y6Y1 1673 aa12.58□□□□□ -0.4
COL6A4P1-203ENST00000491915 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL6A4P1-203ENST00000491915 PUS7Q96PZ0 661 aaKnown RBP12.58□□□□□ -0.4
COL6A4P1-203ENST00000491915 USP35Q9P2H5 1018 aa12.58□□□□□ -0.4
COL6A4P1-203ENST00000491915 CPDO75976 1380 aa12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 KTN1Q86UP2 1357 aaKnown RBP12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 A0A0G2JS52 829 aa12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 SOX12O15370 315 aa12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 MYT1Q01538 1121 aa12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 ARHGEF25Q86VW2 580 aa12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 NME9Q86XW9 330 aa12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 CCDC125Q86Z20 511 aa12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 BRWD3Q6RI45 1802 aa12.57□□□□□ -0.4
COL6A4P1-203ENST00000491915 DEFB132Q7Z7B7 95 aa12.56□□□□□ -0.4
COL6A4P1-203ENST00000491915 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
COL6A4P1-203ENST00000491915 CD163L1Q9NR16 1453 aa12.56□□□□□ -0.4
COL6A4P1-203ENST00000491915 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
COL6A4P1-203ENST00000491915 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
COL6A4P1-203ENST00000491915 BARGINQ6ZT62 677 aa12.54□□□□□ -0.4
COL6A4P1-203ENST00000491915 HDGFL2Q7Z4V5 671 aaPredicted RBP12.54□□□□□ -0.4
COL6A4P1-203ENST00000491915 CLSPNQ9HAW4 1339 aa12.54□□□□□ -0.4
COL6A4P1-203ENST00000491915 AATKQ6ZMQ8 1374 aa12.54□□□□□ -0.4
COL6A4P1-203ENST00000491915 NRKQ7Z2Y5 1582 aa12.53□□□□□ -0.4
COL6A4P1-203ENST00000491915 TCP11L2Q8N4U5 519 aa12.53□□□□□ -0.4
COL6A4P1-203ENST00000491915 CCER1Q8TC90 406 aaPredicted RBP12.53□□□□□ -0.4
COL6A4P1-203ENST00000491915 FBLN1P23142 703 aa12.52□□□□□ -0.41
COL6A4P1-203ENST00000491915 KCNH5Q8NCM2 988 aa12.52□□□□□ -0.41
COL6A4P1-203ENST00000491915 TERF2IPQ9NYB0 399 aa12.52□□□□□ -0.41
COL6A4P1-203ENST00000491915 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
COL6A4P1-203ENST00000491915 USP47Q96K76 1375 aa12.52□□□□□ -0.41
COL6A4P1-203ENST00000491915 SLIT3O75094 1523 aa12.52□□□□□ -0.41
COL6A4P1-203ENST00000491915 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
COL6A4P1-203ENST00000491915 AKAP12Q02952 1782 aa12.51□□□□□ -0.41
COL6A4P1-203ENST00000491915 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
COL6A4P1-203ENST00000491915 BLMP54132 1417 aaPredicted RBP12.51□□□□□ -0.41
COL6A4P1-203ENST00000491915 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
COL6A4P1-203ENST00000491915 TMF1P82094 1093 aa12.5□□□□□ -0.41
COL6A4P1-203ENST00000491915 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
COL6A4P1-203ENST00000491915 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
COL6A4P1-203ENST00000491915 LMO7Q8WWI1 1683 aa12.5□□□□□ -0.41
COL6A4P1-203ENST00000491915 COL18A1P39060 1754 aa12.5□□□□□ -0.41
COL6A4P1-203ENST00000491915 THRAP3Q9Y2W1 955 aaKnown RBP12.49□□□□□ -0.41
COL6A4P1-203ENST00000491915 TRIM37O94972 964 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms