RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 NNTQ13423 1086 aa8.71□□□□□ -1.02
VTA1-204ENST00000491881 ZSCAN1Q8NBB4 408 aa8.71□□□□□ -1.02
VTA1-204ENST00000491881 SPDYE5A6NIY4 337 aa8.7□□□□□ -1.02
VTA1-204ENST00000491881 H3BM21 787 aa8.7□□□□□ -1.02
VTA1-204ENST00000491881 SCARF1Q14162 830 aa8.69□□□□□ -1.02
VTA1-204ENST00000491881 DESI1Q6ICB0 168 aa8.69□□□□□ -1.02
VTA1-204ENST00000491881 ZC3H15Q8WU90 426 aaKnown RBP8.69□□□□□ -1.02
VTA1-204ENST00000491881 CTHP32929 405 aa8.68□□□□□ -1.02
VTA1-204ENST00000491881 MRPL14Q6P1L8 145 aaKnown RBP8.68□□□□□ -1.02
VTA1-204ENST00000491881 MPNDQ8N594 471 aa8.68□□□□□ -1.02
VTA1-204ENST00000491881 ADH1CP00326 375 aa8.67□□□□□ -1.02
VTA1-204ENST00000491881 WDR4P57081 412 aaKnown RBP8.67□□□□□ -1.02
VTA1-204ENST00000491881 ERBB4Q15303 1308 aa8.66□□□□□ -1.02
VTA1-204ENST00000491881 GIGYF2Q6Y7W6 1299 aaKnown RBP8.66□□□□□ -1.02
VTA1-204ENST00000491881 FAM174AQ8TBP5 190 aa8.66□□□□□ -1.02
VTA1-204ENST00000491881 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
VTA1-204ENST00000491881 TIMP2P16035 220 aa8.65□□□□□ -1.02
VTA1-204ENST00000491881 AMHR2Q16671 573 aa8.65□□□□□ -1.02
VTA1-204ENST00000491881 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
VTA1-204ENST00000491881 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
VTA1-204ENST00000491881 BARGINQ6ZT62 677 aa8.64□□□□□ -1.03
VTA1-204ENST00000491881 GJA5P36382 358 aa8.63□□□□□ -1.03
VTA1-204ENST00000491881 ARID5BQ14865 1188 aa8.63□□□□□ -1.03
VTA1-204ENST00000491881 DIXDC1Q155Q3 683 aa8.63□□□□□ -1.03
VTA1-204ENST00000491881 LYPD8Q6UX82 237 aa8.63□□□□□ -1.03
VTA1-204ENST00000491881 TBC1D2Q9BYX2 928 aa8.63□□□□□ -1.03
VTA1-204ENST00000491881 SOBPA7XYQ1 873 aa8.62□□□□□ -1.03
VTA1-204ENST00000491881 RSBN1LQ6PCB5 846 aaPredicted RBP8.62□□□□□ -1.03
VTA1-204ENST00000491881 ZMYND10O75800 440 aa8.61□□□□□ -1.03
VTA1-204ENST00000491881 AGERQ15109 404 aa8.61□□□□□ -1.03
VTA1-204ENST00000491881 FOXJ1Q92949 421 aa8.61□□□□□ -1.03
VTA1-204ENST00000491881 KLF16Q9BXK1 252 aaPredicted RBP8.61□□□□□ -1.03
VTA1-204ENST00000491881 MAP10Q9P2G4 905 aa8.61□□□□□ -1.03
VTA1-204ENST00000491881 CFAP99D6REC4 459 aa8.6□□□□□ -1.03
VTA1-204ENST00000491881 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
VTA1-204ENST00000491881 CDK15Q96Q40 435 aa8.6□□□□□ -1.03
VTA1-204ENST00000491881 ZBTB3Q9H5J0 574 aa8.6□□□□□ -1.03
VTA1-204ENST00000491881 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
VTA1-204ENST00000491881 MAN1A2O60476 641 aa8.59□□□□□ -1.03
VTA1-204ENST00000491881 HRCP23327 699 aa8.59□□□□□ -1.03
VTA1-204ENST00000491881 C6orf118Q5T5N4 469 aa8.59□□□□□ -1.03
VTA1-204ENST00000491881 ZFAND3Q9H8U3 227 aa8.59□□□□□ -1.03
VTA1-204ENST00000491881 F12P00748 615 aaPredicted RBP8.58□□□□□ -1.04
VTA1-204ENST00000491881 NR5A1Q13285 461 aa8.58□□□□□ -1.04
VTA1-204ENST00000491881 ITPKCQ96DU7 683 aa8.58□□□□□ -1.04
VTA1-204ENST00000491881 SPTLC1O15269 473 aa8.57□□□□□ -1.04
VTA1-204ENST00000491881 BPHLQ86WA6 291 aaPredicted RBP8.57□□□□□ -1.04
VTA1-204ENST00000491881 SLC24A3Q9HC58 644 aa8.57□□□□□ -1.04
VTA1-204ENST00000491881 UPP2O95045 317 aa8.56□□□□□ -1.04
VTA1-204ENST00000491881 NR3C2P08235 984 aa8.56□□□□□ -1.04
VTA1-204ENST00000491881 VSIG8P0DPA2 414 aa8.56□□□□□ -1.04
VTA1-204ENST00000491881 CSPP1Q1MSJ5 1256 aa8.56□□□□□ -1.04
VTA1-204ENST00000491881 PRPF38BQ5VTL8 546 aaKnown RBP8.56□□□□□ -1.04
VTA1-204ENST00000491881 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
VTA1-204ENST00000491881 PARP9Q8IXQ6 854 aa8.56□□□□□ -1.04
VTA1-204ENST00000491881 TSC1Q92574 1164 aa8.56□□□□□ -1.04
VTA1-204ENST00000491881 BMP2P12643 396 aa8.55□□□□□ -1.04
VTA1-204ENST00000491881 CABLES1Q8TDN4 633 aa8.55□□□□□ -1.04
VTA1-204ENST00000491881 C4orf48Q5BLP8 95 aa8.54□□□□□ -1.04
VTA1-204ENST00000491881 PER1O15534 1290 aaPredicted RBP8.53□□□□□ -1.04
VTA1-204ENST00000491881 GRM5P41594 1212 aa8.53□□□□□ -1.04
VTA1-204ENST00000491881 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
VTA1-204ENST00000491881 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
VTA1-204ENST00000491881 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
VTA1-204ENST00000491881 NUTM2DQ5VT03 806 aaPredicted RBP8.52□□□□□ -1.05
VTA1-204ENST00000491881 NUTM2AQ8IVF1 878 aaPredicted RBP8.52□□□□□ -1.05
VTA1-204ENST00000491881 ARMC2Q8NEN0 867 aa8.52□□□□□ -1.05
VTA1-204ENST00000491881 TRIM66O15016 1216 aa8.51□□□□□ -1.05
VTA1-204ENST00000491881 PPFIA3O75145 1194 aa8.51□□□□□ -1.05
VTA1-204ENST00000491881 MEIOBQ8N635 442 aa8.51□□□□□ -1.05
VTA1-204ENST00000491881 AK7Q96M32 723 aa8.51□□□□□ -1.05
VTA1-204ENST00000491881 FSHRP23945 695 aa8.5□□□□□ -1.05
VTA1-204ENST00000491881 NBPF14Q5TI25 921 aa8.49□□□□□ -1.05
VTA1-204ENST00000491881 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
VTA1-204ENST00000491881 MAGEB6P1A0A0J9YX57 407 aa8.48□□□□□ -1.05
VTA1-204ENST00000491881 C1QTNF2Q9BXJ5 285 aa8.48□□□□□ -1.05
VTA1-204ENST00000491881 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
VTA1-204ENST00000491881 DNMT3LQ9UJW3 386 aa8.48□□□□□ -1.05
VTA1-204ENST00000491881 MAP4K5Q9Y4K4 846 aa8.48□□□□□ -1.05
VTA1-204ENST00000491881 SOS2Q07890 1332 aaPredicted RBP8.48□□□□□ -1.05
VTA1-204ENST00000491881 NEUROD2Q15784 382 aa8.47□□□□□ -1.05
VTA1-204ENST00000491881 QPCTQ16769 361 aa8.47□□□□□ -1.05
VTA1-204ENST00000491881 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
VTA1-204ENST00000491881 SH3RF1Q7Z6J0 888 aa8.47□□□□□ -1.05
VTA1-204ENST00000491881 HELBQ8NG08 1087 aaPredicted RBP8.47□□□□□ -1.05
VTA1-204ENST00000491881 TSEN34Q9BSV6 310 aaKnown RBP8.47□□□□□ -1.05
VTA1-204ENST00000491881 EMILIN1Q9Y6C2 1016 aa8.47□□□□□ -1.05
VTA1-204ENST00000491881 CCDC116Q8IYX3 515 aa8.46□□□□□ -1.06
VTA1-204ENST00000491881 LILRB3O75022 631 aa8.45□□□□□ -1.06
VTA1-204ENST00000491881 TUSC1Q2TAM9 212 aa8.45□□□□□ -1.06
VTA1-204ENST00000491881 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.45□□□□□ -1.06
VTA1-204ENST00000491881 TRMT44Q8IYL2 757 aaKnown RBP8.45□□□□□ -1.06
VTA1-204ENST00000491881 CARD14Q9BXL6 1004 aa8.45□□□□□ -1.06
VTA1-204ENST00000491881 LOC100996750A0A140TA64 210 aa8.44□□□□□ -1.06
VTA1-204ENST00000491881 TTLL8A6PVC2 850 aa8.44□□□□□ -1.06
VTA1-204ENST00000491881 BRPF1P55201 1214 aaPredicted RBP8.44□□□□□ -1.06
VTA1-204ENST00000491881 SH3BP5LQ7L8J4 393 aa8.44□□□□□ -1.06
VTA1-204ENST00000491881 KRTAP4-6Q9BYQ5 205 aa8.44□□□□□ -1.06
VTA1-204ENST00000491881 KCNMA1Q12791 1236 aa8.43□□□□□ -1.06
VTA1-204ENST00000491881 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms