RNA–Protein interactions for RNA: ENST00000491712.2

SPTAN1-208, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-208ENST00000491712 RALGAPBQ86X10 1494 aa19.3■□□□□ 0.68
SPTAN1-208ENST00000491712 ROCK2O75116 1388 aaKnown RBP19.3■□□□□ 0.68
SPTAN1-208ENST00000491712 CCDC9Q9Y3X0 531 aaKnown RBP19.29■□□□□ 0.68
SPTAN1-208ENST00000491712 POLR3AO14802 1390 aaPredicted RBP19.29■□□□□ 0.68
SPTAN1-208ENST00000491712 COL14A1Q05707 1796 aaKnown RBP19.29■□□□□ 0.68
SPTAN1-208ENST00000491712 VPS72Q15906 364 aa19.28■□□□□ 0.68
SPTAN1-208ENST00000491712 GLI3P10071 1580 aa19.27■□□□□ 0.67
SPTAN1-208ENST00000491712 ACEP12821 1306 aa19.26■□□□□ 0.67
SPTAN1-208ENST00000491712 PLEKHG3A1L390 1219 aa19.26■□□□□ 0.67
SPTAN1-208ENST00000491712 EP400Q96L91 3159 aa19.26■□□□□ 0.67
SPTAN1-208ENST00000491712 PPIP5K1Q6PFW1 1433 aa19.25■□□□□ 0.67
SPTAN1-208ENST00000491712 CRYBG1Q9Y4K1 1723 aa19.25■□□□□ 0.67
SPTAN1-208ENST00000491712 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
SPTAN1-208ENST00000491712 NBPF8Q3BBV2 869 aa19.25■□□□□ 0.67
SPTAN1-208ENST00000491712 TRIM26Q12899 539 aaPredicted RBP19.24■□□□□ 0.67
SPTAN1-208ENST00000491712 PRDM11Q9NQV5 511 aa19.24■□□□□ 0.67
SPTAN1-208ENST00000491712 BTG4Q9NY30 223 aa19.24■□□□□ 0.67
SPTAN1-208ENST00000491712 EVC2Q86UK5 1308 aa19.24■□□□□ 0.67
SPTAN1-208ENST00000491712 NRAPQ86VF7 1730 aa19.23■□□□□ 0.67
SPTAN1-208ENST00000491712 BRD4O60885 1362 aaPredicted RBP19.23■□□□□ 0.67
SPTAN1-208ENST00000491712 TONSLQ96HA7 1378 aa19.23■□□□□ 0.67
SPTAN1-208ENST00000491712 PHRF1Q9P1Y6 1649 aaKnown RBP19.23■□□□□ 0.67
SPTAN1-208ENST00000491712 CCDC125Q86Z20 511 aa19.23■□□□□ 0.67
SPTAN1-208ENST00000491712 CABP2Q9NPB3 220 aa19.22■□□□□ 0.67
SPTAN1-208ENST00000491712 ABTB2Q8N961 1025 aa19.21■□□□□ 0.67
SPTAN1-208ENST00000491712 A0A0G2JS52 829 aa19.2■□□□□ 0.66
SPTAN1-208ENST00000491712 MYT1Q01538 1121 aa19.2■□□□□ 0.66
SPTAN1-208ENST00000491712 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
SPTAN1-208ENST00000491712 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
SPTAN1-208ENST00000491712 BRWD3Q6RI45 1802 aa19.18■□□□□ 0.66
SPTAN1-208ENST00000491712 ONECUT3O60422 494 aaPredicted RBP19.17■□□□□ 0.66
SPTAN1-208ENST00000491712 NLRP13Q86W25 1043 aa19.17■□□□□ 0.66
SPTAN1-208ENST00000491712 NUTM2GQ5VZR2 741 aa19.16■□□□□ 0.66
SPTAN1-208ENST00000491712 CABP1Q9NZU7 370 aa19.16■□□□□ 0.66
SPTAN1-208ENST00000491712 USP6P35125 1406 aa19.16■□□□□ 0.66
SPTAN1-208ENST00000491712 NRKQ7Z2Y5 1582 aa19.15■□□□□ 0.66
SPTAN1-208ENST00000491712 SF3B2Q13435 895 aaKnown RBP19.15■□□□□ 0.66
SPTAN1-208ENST00000491712 KRT27Q7Z3Y8 459 aa19.15■□□□□ 0.66
SPTAN1-208ENST00000491712 CARD11Q9BXL7 1154 aa19.15■□□□□ 0.66
SPTAN1-208ENST00000491712 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
SPTAN1-208ENST00000491712 ZC3H6P61129 1189 aaKnown RBP19.14■□□□□ 0.65
SPTAN1-208ENST00000491712 FAM98CQ17RN3 349 aaKnown RBP19.14■□□□□ 0.65
SPTAN1-208ENST00000491712 USP19O94966 1318 aa19.14■□□□□ 0.65
SPTAN1-208ENST00000491712 SPATA31A5Q5VU36 1347 aa19.14■□□□□ 0.65
SPTAN1-208ENST00000491712 SPATA31A7Q8IWB4 1347 aa19.14■□□□□ 0.65
SPTAN1-208ENST00000491712 SBNO2Q9Y2G9 1366 aa19.14■□□□□ 0.65
SPTAN1-208ENST00000491712 CPDO75976 1380 aa19.13■□□□□ 0.65
SPTAN1-208ENST00000491712 CHRNA2Q15822 529 aa19.12■□□□□ 0.65
SPTAN1-208ENST00000491712 ZNF692Q9BU19 519 aaPredicted RBP19.12■□□□□ 0.65
SPTAN1-208ENST00000491712 EVA1CP58658 441 aa19.11■□□□□ 0.65
SPTAN1-208ENST00000491712 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
SPTAN1-208ENST00000491712 NLRP6P59044 892 aa19.1■□□□□ 0.65
SPTAN1-208ENST00000491712 GCP02774 474 aa19.09■□□□□ 0.65
SPTAN1-208ENST00000491712 AKAP12Q02952 1782 aa19.09■□□□□ 0.65
SPTAN1-208ENST00000491712 SPATA31A1Q5TZJ5 1347 aa19.08■□□□□ 0.65
SPTAN1-208ENST00000491712 ZRANB1Q9UGI0 708 aa19.08■□□□□ 0.64
SPTAN1-208ENST00000491712 SSH2Q76I76 1423 aa19.08■□□□□ 0.64
SPTAN1-208ENST00000491712 THSD7AQ9UPZ6 1657 aa19.08■□□□□ 0.64
SPTAN1-208ENST00000491712 TTC21AQ8NDW8 1320 aa19.06■□□□□ 0.64
SPTAN1-208ENST00000491712 PIK3C2AO00443 1686 aa19.06■□□□□ 0.64
SPTAN1-208ENST00000491712 LMO7Q8WWI1 1683 aa19.06■□□□□ 0.64
SPTAN1-208ENST00000491712 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
SPTAN1-208ENST00000491712 SLIT3O75094 1523 aa19.05■□□□□ 0.64
SPTAN1-208ENST00000491712 KTN1Q86UP2 1357 aaKnown RBP19.05■□□□□ 0.64
SPTAN1-208ENST00000491712 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
SPTAN1-208ENST00000491712 USP35Q9P2H5 1018 aa19.04■□□□□ 0.64
SPTAN1-208ENST00000491712 CAMTA1Q9Y6Y1 1673 aa19.04■□□□□ 0.64
SPTAN1-208ENST00000491712 CPSF1Q10570 1443 aaKnown RBP19.03■□□□□ 0.64
SPTAN1-208ENST00000491712 RGPD1P0DJD0 1748 aa19.03■□□□□ 0.64
SPTAN1-208ENST00000491712 MON2Q7Z3U7 1717 aa19.03■□□□□ 0.64
SPTAN1-208ENST00000491712 TTC21BQ7Z4L5 1316 aa19.02■□□□□ 0.64
SPTAN1-208ENST00000491712 ZBTB7CA1YPR0 619 aa19.02■□□□□ 0.64
SPTAN1-208ENST00000491712 BAG6P46379 1132 aa19.02■□□□□ 0.64
SPTAN1-208ENST00000491712 BARGINQ6ZT62 677 aa19.02■□□□□ 0.64
SPTAN1-208ENST00000491712 THRAP3Q9Y2W1 955 aaKnown RBP19.02■□□□□ 0.64
SPTAN1-208ENST00000491712 AATKQ6ZMQ8 1374 aa19.02■□□□□ 0.64
SPTAN1-208ENST00000491712 COL5A2P05997 1499 aaPredicted RBP19.02■□□□□ 0.63
SPTAN1-208ENST00000491712 HDGFL2Q7Z4V5 671 aaPredicted RBP19.01■□□□□ 0.63
SPTAN1-208ENST00000491712 TCP11L2Q8N4U5 519 aa19.01■□□□□ 0.63
SPTAN1-208ENST00000491712 LARP1Q6PKG0 1096 aaKnown RBP19■□□□□ 0.63
SPTAN1-208ENST00000491712 TMC1Q8TDI8 760 aa19■□□□□ 0.63
SPTAN1-208ENST00000491712 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
SPTAN1-208ENST00000491712 CRB1P82279 1406 aa19■□□□□ 0.63
SPTAN1-208ENST00000491712 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
SPTAN1-208ENST00000491712 NINLQ9Y2I6 1382 aa18.98■□□□□ 0.63
SPTAN1-208ENST00000491712 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
SPTAN1-208ENST00000491712 FAM196AQ6ZSG2 479 aa18.98■□□□□ 0.63
SPTAN1-208ENST00000491712 DEFB132Q7Z7B7 95 aa18.98■□□□□ 0.63
SPTAN1-208ENST00000491712 ABCC6O95255 1503 aa18.95■□□□□ 0.62
SPTAN1-208ENST00000491712 EDC4Q6P2E9 1401 aaKnown RBP18.95■□□□□ 0.62
SPTAN1-208ENST00000491712 C11orf95C9JLR9 678 aaPredicted RBP18.95■□□□□ 0.62
SPTAN1-208ENST00000491712 CLSPNQ9HAW4 1339 aa18.95■□□□□ 0.62
SPTAN1-208ENST00000491712 PARP4Q9UKK3 1724 aaKnown RBP18.94■□□□□ 0.62
SPTAN1-208ENST00000491712 ST20-MTHFSA0A0A6YYL1 179 aa18.94■□□□□ 0.62
SPTAN1-208ENST00000491712 SOX12O15370 315 aa18.94■□□□□ 0.62
SPTAN1-208ENST00000491712 FAM182BQ5T319 152 aa18.94■□□□□ 0.62
SPTAN1-208ENST00000491712 TOM1L2Q6ZVM7 507 aa18.94■□□□□ 0.62
SPTAN1-208ENST00000491712 ARHGEF25Q86VW2 580 aa18.94■□□□□ 0.62
SPTAN1-208ENST00000491712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.94■□□□□ 0.62
SPTAN1-208ENST00000491712 USP54Q70EL1 1684 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms