RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GJD4Q96KN9 370 aaPredicted RBP18.26■□□□□ 0.51
SEC61A1-206ENST00000491668 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
SEC61A1-206ENST00000491668 PLCH1Q4KWH8 1693 aa18.25■□□□□ 0.51
SEC61A1-206ENST00000491668 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
SEC61A1-206ENST00000491668 RALGAPBQ86X10 1494 aa18.25■□□□□ 0.51
SEC61A1-206ENST00000491668 CABP2Q9NPB3 220 aa18.24■□□□□ 0.51
SEC61A1-206ENST00000491668 ACEP12821 1306 aa18.23■□□□□ 0.51
SEC61A1-206ENST00000491668 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
SEC61A1-206ENST00000491668 NWD2Q9ULI1 1742 aa18.23■□□□□ 0.51
SEC61A1-206ENST00000491668 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
SEC61A1-206ENST00000491668 ROCK2O75116 1388 aaKnown RBP18.21■□□□□ 0.51
SEC61A1-206ENST00000491668 PPIP5K1Q6PFW1 1433 aa18.21■□□□□ 0.51
SEC61A1-206ENST00000491668 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
SEC61A1-206ENST00000491668 SRPK2P78362 688 aaKnown RBP18.2■□□□□ 0.5
SEC61A1-206ENST00000491668 VPS72Q15906 364 aa18.2■□□□□ 0.5
SEC61A1-206ENST00000491668 COL14A1Q05707 1796 aaKnown RBP18.18■□□□□ 0.5
SEC61A1-206ENST00000491668 NUTM2GQ5VZR2 741 aa18.18■□□□□ 0.5
SEC61A1-206ENST00000491668 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
SEC61A1-206ENST00000491668 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
SEC61A1-206ENST00000491668 BTG4Q9NY30 223 aa18.16■□□□□ 0.5
SEC61A1-206ENST00000491668 CABP1Q9NZU7 370 aa18.16■□□□□ 0.5
SEC61A1-206ENST00000491668 BRWD3Q6RI45 1802 aa18.15■□□□□ 0.5
SEC61A1-206ENST00000491668 ONECUT3O60422 494 aaPredicted RBP18.15■□□□□ 0.5
SEC61A1-206ENST00000491668 KIAA0232Q92628 1395 aa18.15■□□□□ 0.5
SEC61A1-206ENST00000491668 SSH2Q76I76 1423 aa18.14■□□□□ 0.49
SEC61A1-206ENST00000491668 SEPT12Q8IYM1 358 aa18.13■□□□□ 0.49
SEC61A1-206ENST00000491668 USP19O94966 1318 aa18.13■□□□□ 0.49
SEC61A1-206ENST00000491668 EVC2Q86UK5 1308 aa18.13■□□□□ 0.49
SEC61A1-206ENST00000491668 TONSLQ96HA7 1378 aa18.13■□□□□ 0.49
SEC61A1-206ENST00000491668 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
SEC61A1-206ENST00000491668 ABTB2Q8N961 1025 aa18.12■□□□□ 0.49
SEC61A1-206ENST00000491668 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
SEC61A1-206ENST00000491668 USP6P35125 1406 aa18.12■□□□□ 0.49
SEC61A1-206ENST00000491668 ZC3H6P61129 1189 aaKnown RBP18.11■□□□□ 0.49
SEC61A1-206ENST00000491668 CHRNA2Q15822 529 aa18.11■□□□□ 0.49
SEC61A1-206ENST00000491668 CCDC9Q9Y3X0 531 aaKnown RBP18.11■□□□□ 0.49
SEC61A1-206ENST00000491668 SBNO2Q9Y2G9 1366 aa18.1■□□□□ 0.49
SEC61A1-206ENST00000491668 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
SEC61A1-206ENST00000491668 SPATA31A5Q5VU36 1347 aa18.09■□□□□ 0.49
SEC61A1-206ENST00000491668 SPATA31A7Q8IWB4 1347 aa18.09■□□□□ 0.49
SEC61A1-206ENST00000491668 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.49
SEC61A1-206ENST00000491668 FAM98CQ17RN3 349 aaKnown RBP18.08■□□□□ 0.48
SEC61A1-206ENST00000491668 CPDO75976 1380 aa18.07■□□□□ 0.48
SEC61A1-206ENST00000491668 PIK3C2AO00443 1686 aa18.07■□□□□ 0.48
SEC61A1-206ENST00000491668 LMO7Q8WWI1 1683 aa18.07■□□□□ 0.48
SEC61A1-206ENST00000491668 CAMTA1Q9Y6Y1 1673 aa18.07■□□□□ 0.48
SEC61A1-206ENST00000491668 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
SEC61A1-206ENST00000491668 SRCAPQ6ZRS2 3230 aa18.06■□□□□ 0.48
SEC61A1-206ENST00000491668 AKAP12Q02952 1782 aa18.06■□□□□ 0.48
SEC61A1-206ENST00000491668 SLIT3O75094 1523 aa18.05■□□□□ 0.48
SEC61A1-206ENST00000491668 GCP02774 474 aa18.05■□□□□ 0.48
SEC61A1-206ENST00000491668 NLRP13Q86W25 1043 aa18.05■□□□□ 0.48
SEC61A1-206ENST00000491668 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
SEC61A1-206ENST00000491668 THSD7AQ9UPZ6 1657 aa18.05■□□□□ 0.48
SEC61A1-206ENST00000491668 SPATA31A1Q5TZJ5 1347 aa18.04■□□□□ 0.48
SEC61A1-206ENST00000491668 KRT27Q7Z3Y8 459 aa18.04■□□□□ 0.48
SEC61A1-206ENST00000491668 CD163L1Q9NR16 1453 aa18.03■□□□□ 0.48
SEC61A1-206ENST00000491668 STRN4Q9NRL3 753 aa18.03■□□□□ 0.48
SEC61A1-206ENST00000491668 TTC21BQ7Z4L5 1316 aa18.02■□□□□ 0.48
SEC61A1-206ENST00000491668 NLRP6P59044 892 aa18.02■□□□□ 0.48
SEC61A1-206ENST00000491668 CCDC125Q86Z20 511 aa18.02■□□□□ 0.48
SEC61A1-206ENST00000491668 BLMP54132 1417 aaPredicted RBP18.01■□□□□ 0.47
SEC61A1-206ENST00000491668 TESK2Q96S53 571 aa18.01■□□□□ 0.47
SEC61A1-206ENST00000491668 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
SEC61A1-206ENST00000491668 MON2Q7Z3U7 1717 aa18.01■□□□□ 0.47
SEC61A1-206ENST00000491668 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
SEC61A1-206ENST00000491668 COL18A1P39060 1754 aa17.99■□□□□ 0.47
SEC61A1-206ENST00000491668 FAM182BQ5T319 152 aa17.99■□□□□ 0.47
SEC61A1-206ENST00000491668 KTN1Q86UP2 1357 aaKnown RBP17.99■□□□□ 0.47
SEC61A1-206ENST00000491668 COL5A2P05997 1499 aaPredicted RBP17.99■□□□□ 0.47
SEC61A1-206ENST00000491668 ST20-MTHFSA0A0A6YYL1 179 aa17.98■□□□□ 0.47
SEC61A1-206ENST00000491668 A0A0G2JS52 829 aa17.98■□□□□ 0.47
SEC61A1-206ENST00000491668 MYT1Q01538 1121 aa17.98■□□□□ 0.47
SEC61A1-206ENST00000491668 SLC12A5Q9H2X9 1139 aa17.98■□□□□ 0.47
SEC61A1-206ENST00000491668 AATKQ6ZMQ8 1374 aa17.97■□□□□ 0.47
SEC61A1-206ENST00000491668 DEFB132Q7Z7B7 95 aa17.97■□□□□ 0.47
SEC61A1-206ENST00000491668 ZRANB1Q9UGI0 708 aa17.97■□□□□ 0.47
SEC61A1-206ENST00000491668 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
SEC61A1-206ENST00000491668 EVA1CP58658 441 aa17.96■□□□□ 0.47
SEC61A1-206ENST00000491668 USP35Q9P2H5 1018 aa17.96■□□□□ 0.47
SEC61A1-206ENST00000491668 NFAT5O94916 1531 aa17.96■□□□□ 0.47
SEC61A1-206ENST00000491668 BARGINQ6ZT62 677 aa17.95■□□□□ 0.46
SEC61A1-206ENST00000491668 ARHGEF25Q86VW2 580 aa17.95■□□□□ 0.46
SEC61A1-206ENST00000491668 AXIN2Q9Y2T1 843 aa17.95■□□□□ 0.46
SEC61A1-206ENST00000491668 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
SEC61A1-206ENST00000491668 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
SEC61A1-206ENST00000491668 NME9Q86XW9 330 aa17.93■□□□□ 0.46
SEC61A1-206ENST00000491668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.93■□□□□ 0.46
SEC61A1-206ENST00000491668 TMC1Q8TDI8 760 aa17.93■□□□□ 0.46
SEC61A1-206ENST00000491668 USP54Q70EL1 1684 aa17.93■□□□□ 0.46
SEC61A1-206ENST00000491668 A0A1W2PP64 1363 aa17.92■□□□□ 0.46
SEC61A1-206ENST00000491668 USP31Q70CQ4 1352 aa17.92■□□□□ 0.46
SEC61A1-206ENST00000491668 TCP11L2Q8N4U5 519 aa17.92■□□□□ 0.46
SEC61A1-206ENST00000491668 CLSPNQ9HAW4 1339 aa17.92■□□□□ 0.46
SEC61A1-206ENST00000491668 CRB1P82279 1406 aa17.91■□□□□ 0.46
SEC61A1-206ENST00000491668 SOX12O15370 315 aa17.91■□□□□ 0.46
SEC61A1-206ENST00000491668 USP47Q96K76 1375 aa17.91■□□□□ 0.46
SEC61A1-206ENST00000491668 RGPD5Q99666 1765 aa17.9■□□□□ 0.46
SEC61A1-206ENST00000491668 KCNH5Q8NCM2 988 aa17.9■□□□□ 0.46
SEC61A1-206ENST00000491668 EDC4Q6P2E9 1401 aaKnown RBP17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms