RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 CCDC61Q9Y6R9 512 aa26.5■■□□□ 1.83
SMIM4-205ENST00000491607 CENPJQ9HC77 1338 aaPredicted RBP26.49■■□□□ 1.83
SMIM4-205ENST00000491607 ACEP12821 1306 aa26.48■■□□□ 1.83
SMIM4-205ENST00000491607 SRPK2P78362 688 aaKnown RBP26.48■■□□□ 1.83
SMIM4-205ENST00000491607 COL14A1Q05707 1796 aaKnown RBP26.48■■□□□ 1.83
SMIM4-205ENST00000491607 TOPAZ1Q8N9V7 1692 aa26.47■■□□□ 1.83
SMIM4-205ENST00000491607 A0A0G2JS52 829 aa26.47■■□□□ 1.83
SMIM4-205ENST00000491607 MYT1Q01538 1121 aa26.47■■□□□ 1.83
SMIM4-205ENST00000491607 NEUROD1Q13562 356 aa26.47■■□□□ 1.83
SMIM4-205ENST00000491607 CCDC125Q86Z20 511 aa26.47■■□□□ 1.83
SMIM4-205ENST00000491607 EP400Q96L91 3159 aa26.47■■□□□ 1.83
SMIM4-205ENST00000491607 CRYBG1Q9Y4K1 1723 aa26.46■■□□□ 1.83
SMIM4-205ENST00000491607 PRDM11Q9NQV5 511 aa26.46■■□□□ 1.83
SMIM4-205ENST00000491607 POLR3AO14802 1390 aaPredicted RBP26.46■■□□□ 1.83
SMIM4-205ENST00000491607 NRAPQ86VF7 1730 aa26.45■■□□□ 1.83
SMIM4-205ENST00000491607 NBPF8Q3BBV2 869 aa26.45■■□□□ 1.82
SMIM4-205ENST00000491607 NUTM2GQ5VZR2 741 aa26.45■■□□□ 1.82
SMIM4-205ENST00000491607 PLEKHG3A1L390 1219 aa26.43■■□□□ 1.82
SMIM4-205ENST00000491607 ONECUT3O60422 494 aaPredicted RBP26.43■■□□□ 1.82
SMIM4-205ENST00000491607 CABP2Q9NPB3 220 aa26.43■■□□□ 1.82
SMIM4-205ENST00000491607 BRWD3Q6RI45 1802 aa26.43■■□□□ 1.82
SMIM4-205ENST00000491607 FAM98CQ17RN3 349 aaKnown RBP26.42■■□□□ 1.82
SMIM4-205ENST00000491607 QRICH2Q9H0J4 1663 aa26.41■■□□□ 1.82
SMIM4-205ENST00000491607 PPIP5K1Q6PFW1 1433 aa26.41■■□□□ 1.82
SMIM4-205ENST00000491607 KRT27Q7Z3Y8 459 aa26.41■■□□□ 1.82
SMIM4-205ENST00000491607 KIAA0232Q92628 1395 aa26.41■■□□□ 1.82
SMIM4-205ENST00000491607 BLMP54132 1417 aaPredicted RBP26.4■■□□□ 1.82
SMIM4-205ENST00000491607 PHRF1Q9P1Y6 1649 aaKnown RBP26.4■■□□□ 1.82
SMIM4-205ENST00000491607 ZC3H6P61129 1189 aaKnown RBP26.39■■□□□ 1.82
SMIM4-205ENST00000491607 CHRNA2Q15822 529 aa26.39■■□□□ 1.82
SMIM4-205ENST00000491607 ABTB2Q8N961 1025 aa26.39■■□□□ 1.82
SMIM4-205ENST00000491607 TRPM1Q7Z4N2 1603 aa26.37■■□□□ 1.81
SMIM4-205ENST00000491607 SF3B2Q13435 895 aaKnown RBP26.37■■□□□ 1.81
SMIM4-205ENST00000491607 ZRANB1Q9UGI0 708 aa26.37■■□□□ 1.81
SMIM4-205ENST00000491607 SPATA31A5Q5VU36 1347 aa26.37■■□□□ 1.81
SMIM4-205ENST00000491607 SPATA31A7Q8IWB4 1347 aa26.37■■□□□ 1.81
SMIM4-205ENST00000491607 ROCK2O75116 1388 aaKnown RBP26.36■■□□□ 1.81
SMIM4-205ENST00000491607 STRN4Q9NRL3 753 aa26.35■■□□□ 1.81
SMIM4-205ENST00000491607 CABP1Q9NZU7 370 aa26.33■■□□□ 1.81
SMIM4-205ENST00000491607 EVC2Q86UK5 1308 aa26.32■■□□□ 1.8
SMIM4-205ENST00000491607 DEFB132Q7Z7B7 95 aa26.31■■□□□ 1.8
SMIM4-205ENST00000491607 NRKQ7Z2Y5 1582 aa26.31■■□□□ 1.8
SMIM4-205ENST00000491607 NLRP13Q86W25 1043 aa26.3■■□□□ 1.8
SMIM4-205ENST00000491607 EVA1CP58658 441 aa26.29■■□□□ 1.8
SMIM4-205ENST00000491607 SPATA31A1Q5TZJ5 1347 aa26.29■■□□□ 1.8
SMIM4-205ENST00000491607 USP19O94966 1318 aa26.28■■□□□ 1.8
SMIM4-205ENST00000491607 BRD4O60885 1362 aaPredicted RBP26.27■■□□□ 1.8
SMIM4-205ENST00000491607 USP6P35125 1406 aa26.27■■□□□ 1.8
SMIM4-205ENST00000491607 FAM182BQ5T319 152 aa26.26■■□□□ 1.79
SMIM4-205ENST00000491607 USP35Q9P2H5 1018 aa26.26■■□□□ 1.79
SMIM4-205ENST00000491607 THSD7AQ9UPZ6 1657 aa26.25■■□□□ 1.79
SMIM4-205ENST00000491607 CPDO75976 1380 aa26.25■■□□□ 1.79
SMIM4-205ENST00000491607 GCP02774 474 aa26.25■■□□□ 1.79
SMIM4-205ENST00000491607 SSH2Q76I76 1423 aa26.23■■□□□ 1.79
SMIM4-205ENST00000491607 ZBTB7CA1YPR0 619 aa26.23■■□□□ 1.79
SMIM4-205ENST00000491607 NLRP6P59044 892 aa26.23■■□□□ 1.79
SMIM4-205ENST00000491607 CAMTA1Q9Y6Y1 1673 aa26.22■■□□□ 1.79
SMIM4-205ENST00000491607 BAG6P46379 1132 aa26.21■■□□□ 1.79
SMIM4-205ENST00000491607 LARP1Q6PKG0 1096 aaKnown RBP26.2■■□□□ 1.78
SMIM4-205ENST00000491607 TONSLQ96HA7 1378 aa26.2■■□□□ 1.78
SMIM4-205ENST00000491607 LMO7Q8WWI1 1683 aa26.19■■□□□ 1.78
SMIM4-205ENST00000491607 CARD11Q9BXL7 1154 aa26.19■■□□□ 1.78
SMIM4-205ENST00000491607 BARGINQ6ZT62 677 aa26.16■■□□□ 1.78
SMIM4-205ENST00000491607 ZNF692Q9BU19 519 aaPredicted RBP26.16■■□□□ 1.78
SMIM4-205ENST00000491607 PIK3C2AO00443 1686 aa26.15■■□□□ 1.78
SMIM4-205ENST00000491607 RGPD1P0DJD0 1748 aa26.15■■□□□ 1.78
SMIM4-205ENST00000491607 TCP11L2Q8N4U5 519 aa26.15■■□□□ 1.78
SMIM4-205ENST00000491607 SLIT3O75094 1523 aa26.14■■□□□ 1.78
SMIM4-205ENST00000491607 COL5A2P05997 1499 aaPredicted RBP26.14■■□□□ 1.78
SMIM4-205ENST00000491607 TTC21BQ7Z4L5 1316 aa26.14■■□□□ 1.77
SMIM4-205ENST00000491607 EN1Q05925 392 aaPredicted RBP26.13■■□□□ 1.77
SMIM4-205ENST00000491607 PDE3BQ13370 1112 aa26.13■■□□□ 1.77
SMIM4-205ENST00000491607 SRCAPQ6ZRS2 3230 aa26.13■■□□□ 1.77
SMIM4-205ENST00000491607 FAM196AQ6ZSG2 479 aa26.12■■□□□ 1.77
SMIM4-205ENST00000491607 KTN1Q86UP2 1357 aaKnown RBP26.11■■□□□ 1.77
SMIM4-205ENST00000491607 AKAP12Q02952 1782 aa26.1■■□□□ 1.77
SMIM4-205ENST00000491607 AATKQ6ZMQ8 1374 aa26.1■■□□□ 1.77
SMIM4-205ENST00000491607 SBNO2Q9Y2G9 1366 aa26.1■■□□□ 1.77
SMIM4-205ENST00000491607 SOX12O15370 315 aa26.1■■□□□ 1.77
SMIM4-205ENST00000491607 THRAP3Q9Y2W1 955 aaKnown RBP26.1■■□□□ 1.77
SMIM4-205ENST00000491607 CRB1P82279 1406 aa26.09■■□□□ 1.77
SMIM4-205ENST00000491607 CPSF1Q10570 1443 aaKnown RBP26.09■■□□□ 1.77
SMIM4-205ENST00000491607 TRIM37O94972 964 aa26.09■■□□□ 1.77
SMIM4-205ENST00000491607 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
SMIM4-205ENST00000491607 TTC21AQ8NDW8 1320 aa26.09■■□□□ 1.77
SMIM4-205ENST00000491607 KCNH5Q8NCM2 988 aa26.07■■□□□ 1.76
SMIM4-205ENST00000491607 TNS1Q9HBL0 1735 aaKnown RBP26.07■■□□□ 1.76
SMIM4-205ENST00000491607 TMC1Q8TDI8 760 aa26.06■■□□□ 1.76
SMIM4-205ENST00000491607 PSDA5PKW4 1024 aaPredicted RBP26.05■■□□□ 1.76
SMIM4-205ENST00000491607 TOM1L2Q6ZVM7 507 aa26.05■■□□□ 1.76
SMIM4-205ENST00000491607 DISP2A7MBM2 1401 aa26.05■■□□□ 1.76
SMIM4-205ENST00000491607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.04■■□□□ 1.76
SMIM4-205ENST00000491607 APBA3O96018 575 aa26.03■■□□□ 1.76
SMIM4-205ENST00000491607 EZH2Q15910 746 aaKnown RBP26.03■■□□□ 1.76
SMIM4-205ENST00000491607 AXIN2Q9Y2T1 843 aa26.03■■□□□ 1.76
SMIM4-205ENST00000491607 ARHGEF25Q86VW2 580 aa26.02■■□□□ 1.76
SMIM4-205ENST00000491607 MON2Q7Z3U7 1717 aa26.02■■□□□ 1.76
SMIM4-205ENST00000491607 PARP4Q9UKK3 1724 aaKnown RBP26.01■■□□□ 1.75
SMIM4-205ENST00000491607 COL18A1P39060 1754 aa26■■□□□ 1.75
SMIM4-205ENST00000491607 WDR17Q8IZU2 1322 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms