RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
PCYT1A-216ENST00000491544 BTG4Q9NY30 223 aa15.45■□□□□ 0.06
PCYT1A-216ENST00000491544 ABCA3Q99758 1704 aa15.45■□□□□ 0.06
PCYT1A-216ENST00000491544 ANKRD50Q9ULJ7 1429 aa15.44■□□□□ 0.06
PCYT1A-216ENST00000491544 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
PCYT1A-216ENST00000491544 TNS3Q68CZ2 1445 aa15.43■□□□□ 0.06
PCYT1A-216ENST00000491544 CDC42BPGQ6DT37 1551 aa15.42■□□□□ 0.06
PCYT1A-216ENST00000491544 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
PCYT1A-216ENST00000491544 ARXQ96QS3 562 aa15.41■□□□□ 0.06
PCYT1A-216ENST00000491544 MTFR1LQ9H019 292 aa15.4■□□□□ 0.06
PCYT1A-216ENST00000491544 WWC3Q9ULE0 1092 aa15.4■□□□□ 0.06
PCYT1A-216ENST00000491544 RAB3GAP2Q9H2M9 1393 aa15.39■□□□□ 0.05
PCYT1A-216ENST00000491544 IQGAP3Q86VI3 1631 aa15.39■□□□□ 0.05
PCYT1A-216ENST00000491544 RGPD3A6NKT7 1758 aaPredicted RBP15.38■□□□□ 0.05
PCYT1A-216ENST00000491544 RGPD4Q7Z3J3 1758 aa15.38■□□□□ 0.05
PCYT1A-216ENST00000491544 PRAG1Q86YV5 1406 aa15.37■□□□□ 0.05
PCYT1A-216ENST00000491544 KRT28Q7Z3Y7 464 aa15.37■□□□□ 0.05
PCYT1A-216ENST00000491544 JMYQ8N9B5 988 aa15.37■□□□□ 0.05
PCYT1A-216ENST00000491544 ZNF526Q8TF50 670 aaPredicted RBP15.37■□□□□ 0.05
PCYT1A-216ENST00000491544 COL14A1Q05707 1796 aaKnown RBP15.35■□□□□ 0.05
PCYT1A-216ENST00000491544 BCL11BQ9C0K0 894 aaPredicted RBP15.35■□□□□ 0.05
PCYT1A-216ENST00000491544 SPATA31A1Q5TZJ5 1347 aa15.35■□□□□ 0.05
PCYT1A-216ENST00000491544 ADCY9O60503 1353 aa15.35■□□□□ 0.05
PCYT1A-216ENST00000491544 AATKQ6ZMQ8 1374 aa15.35■□□□□ 0.05
PCYT1A-216ENST00000491544 NUTM2FA1L443 756 aa15.33■□□□□ 0.04
PCYT1A-216ENST00000491544 PDE3BQ13370 1112 aa15.33■□□□□ 0.04
PCYT1A-216ENST00000491544 KIF1AQ12756 1690 aa15.32■□□□□ 0.04
PCYT1A-216ENST00000491544 PLSCR1O15162 318 aa15.32■□□□□ 0.04
PCYT1A-216ENST00000491544 KLRG1Q96E93 195 aa15.32■□□□□ 0.04
PCYT1A-216ENST00000491544 KIF3CO14782 793 aa15.31■□□□□ 0.04
PCYT1A-216ENST00000491544 ARHGEF10O15013 1369 aa15.31■□□□□ 0.04
PCYT1A-216ENST00000491544 TNS2Q63HR2 1409 aa15.31■□□□□ 0.04
PCYT1A-216ENST00000491544 NUP155O75694 1391 aa15.3■□□□□ 0.04
PCYT1A-216ENST00000491544 YBX3P16989 372 aaKnown RBP eCLIP15.3■□□□□ 0.043e-8■□□□□ 10.5
PCYT1A-216ENST00000491544 TECPR2O15040 1411 aa15.29■□□□□ 0.04
PCYT1A-216ENST00000491544 SBNO1A3KN83 1393 aa15.29■□□□□ 0.04
PCYT1A-216ENST00000491544 GRIN3BO60391 1043 aa15.29■□□□□ 0.04
PCYT1A-216ENST00000491544 LMOD2Q6P5Q4 547 aa15.29■□□□□ 0.04
PCYT1A-216ENST00000491544 PROM2Q8N271 834 aa15.29■□□□□ 0.04
PCYT1A-216ENST00000491544 STK32BQ9NY57 414 aa15.29■□□□□ 0.04
PCYT1A-216ENST00000491544 SLC15A2Q16348 729 aa15.28■□□□□ 0.04
PCYT1A-216ENST00000491544 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
PCYT1A-216ENST00000491544 WDR90Q96KV7 1748 aa15.28■□□□□ 0.04
PCYT1A-216ENST00000491544 E9PCH4 1651 aa15.28■□□□□ 0.04
PCYT1A-216ENST00000491544 PSME1Q06323 249 aa15.26■□□□□ 0.03
PCYT1A-216ENST00000491544 NLGN2Q8NFZ4 835 aa15.26■□□□□ 0.03
PCYT1A-216ENST00000491544 HTRA3P83110 453 aa15.25■□□□□ 0.03
PCYT1A-216ENST00000491544 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
PCYT1A-216ENST00000491544 ZNF326Q5BKZ1 582 aaKnown RBP15.24■□□□□ 0.03
PCYT1A-216ENST00000491544 BARGINQ6ZT62 677 aa15.23■□□□□ 0.03
PCYT1A-216ENST00000491544 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
PCYT1A-216ENST00000491544 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
PCYT1A-216ENST00000491544 PTF1AQ7RTS3 328 aa15.21■□□□□ 0.03
PCYT1A-216ENST00000491544 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
PCYT1A-216ENST00000491544 OVOS2A0A0G2JMS6 1433 aa15.2■□□□□ 0.02
PCYT1A-216ENST00000491544 OVOS2A0A0J9YW53 1432 aa15.2■□□□□ 0.02
PCYT1A-216ENST00000491544 OVOS2Q6IE36 1432 aa15.2■□□□□ 0.02
PCYT1A-216ENST00000491544 MPHOSPH9Q99550 1183 aa15.2■□□□□ 0.02
PCYT1A-216ENST00000491544 STRN4Q9NRL3 753 aa15.2■□□□□ 0.02
PCYT1A-216ENST00000491544 FMN2Q9NZ56 1722 aa15.2■□□□□ 0.02
PCYT1A-216ENST00000491544 C11orf95C9JLR9 678 aaPredicted RBP15.19■□□□□ 0.02
PCYT1A-216ENST00000491544 PRDM11Q9NQV5 511 aa15.19■□□□□ 0.02
PCYT1A-216ENST00000491544 ACIN1Q9UKV3 1341 aaKnown RBP15.18■□□□□ 0.02
PCYT1A-216ENST00000491544 TOMM70O94826 608 aa15.18■□□□□ 0.02
PCYT1A-216ENST00000491544 HSPA1AP0DMV8 641 aaKnown RBP15.18■□□□□ 0.02
PCYT1A-216ENST00000491544 HSPA1BP0DMV9 641 aaKnown RBP15.18■□□□□ 0.02
PCYT1A-216ENST00000491544 TXNRD1Q16881 649 aa15.18■□□□□ 0.02
PCYT1A-216ENST00000491544 PHF8Q9UPP1 1060 aa15.18■□□□□ 0.02
PCYT1A-216ENST00000491544 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
PCYT1A-216ENST00000491544 NRXN1Q9ULB1 1477 aa15.18■□□□□ 0.02
PCYT1A-216ENST00000491544 SBF2Q86WG5 1849 aa15.13■□□□□ 0.01
PCYT1A-216ENST00000491544 POLD1P28340 1107 aa15.13■□□□□ 0.01
PCYT1A-216ENST00000491544 SSH2Q76I76 1423 aa15.13■□□□□ 0.01
PCYT1A-216ENST00000491544 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
PCYT1A-216ENST00000491544 PARP4Q9UKK3 1724 aaKnown RBP15.13■□□□□ 0.01
PCYT1A-216ENST00000491544 CRYBG1Q9Y4K1 1723 aa15.12■□□□□ 0.01
PCYT1A-216ENST00000491544 CHRNA2Q15822 529 aa15.12■□□□□ 0.01
PCYT1A-216ENST00000491544 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
PCYT1A-216ENST00000491544 CLTCL1P53675 1640 aa15.12■□□□□ 0.01
PCYT1A-216ENST00000491544 ATP7BP35670 1465 aa15.12■□□□□ 0.01
PCYT1A-216ENST00000491544 KIAA0232Q92628 1395 aa15.11■□□□□ 0.01
PCYT1A-216ENST00000491544 TRPM3Q9HCF6 1732 aaPredicted RBP15.11■□□□□ 0.01
PCYT1A-216ENST00000491544 PAPPAQ13219 1627 aa15.1■□□□□ 0.01
PCYT1A-216ENST00000491544 TOPAZ1Q8N9V7 1692 aa15.1■□□□□ 0.01
PCYT1A-216ENST00000491544 ALS2Q96Q42 1657 aa15.1■□□□□ 0.01
PCYT1A-216ENST00000491544 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
PCYT1A-216ENST00000491544 PLEKHH1Q9ULM0 1364 aa15.1■□□□□ 0.01
PCYT1A-216ENST00000491544 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
PCYT1A-216ENST00000491544 KIF1BO60333 1816 aa15.09■□□□□ 0.01
PCYT1A-216ENST00000491544 COL24A1Q17RW2 1714 aa15.09■□□□□ 0.01
PCYT1A-216ENST00000491544 LARP1Q6PKG0 1096 aaKnown RBP15.08■□□□□ 0
PCYT1A-216ENST00000491544 ARHGEF28Q8N1W1 1705 aaKnown RBP15.07■□□□□ 0
PCYT1A-216ENST00000491544 ZNF827Q17R98 1081 aa15.07■□□□□ 0
PCYT1A-216ENST00000491544 RGPD8O14715 1765 aaPredicted RBP15.06■□□□□ 0
PCYT1A-216ENST00000491544 ANKRD30BQ9BXX2 1392 aa15.06■□□□□ 0
PCYT1A-216ENST00000491544 EVA1CP58658 441 aa15.05■□□□□ -0
PCYT1A-216ENST00000491544 RBM46Q8TBY0 533 aaKnown RBP15.05■□□□□ -0
PCYT1A-216ENST00000491544 THRAP3Q9Y2W1 955 aaKnown RBP15.05■□□□□ -0
PCYT1A-216ENST00000491544 LRRC37A3O60309 1634 aa15.05■□□□□ -0
PCYT1A-216ENST00000491544 MLLT1Q03111 559 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms