RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 ACEP12821 1306 aa18.65■□□□□ 0.58
NUP188-208ENST00000491502 POLR3AO14802 1390 aaPredicted RBP18.65■□□□□ 0.58
NUP188-208ENST00000491502 CDCA8Q53HL2 280 aa18.64■□□□□ 0.57
NUP188-208ENST00000491502 TRPM3Q9HCF6 1732 aaPredicted RBP18.63■□□□□ 0.57
NUP188-208ENST00000491502 RBM6P78332 1123 aaKnown RBP18.62■□□□□ 0.57
NUP188-208ENST00000491502 TMF1P82094 1093 aa18.62■□□□□ 0.57
NUP188-208ENST00000491502 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
NUP188-208ENST00000491502 CABLES1Q8TDN4 633 aa18.62■□□□□ 0.57
NUP188-208ENST00000491502 TRPC5Q9UL62 973 aaPredicted RBP18.62■□□□□ 0.57
NUP188-208ENST00000491502 CCDC7Q96M83 1385 aa18.62■□□□□ 0.57
NUP188-208ENST00000491502 MARF1Q9Y4F3 1742 aaKnown RBP18.61■□□□□ 0.57
NUP188-208ENST00000491502 TOPAZ1Q8N9V7 1692 aa18.61■□□□□ 0.57
NUP188-208ENST00000491502 PPIP5K1Q6PFW1 1433 aa18.61■□□□□ 0.57
NUP188-208ENST00000491502 SBNO2Q9Y2G9 1366 aa18.61■□□□□ 0.57
NUP188-208ENST00000491502 BRD4O60885 1362 aaPredicted RBP18.6■□□□□ 0.57
NUP188-208ENST00000491502 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
NUP188-208ENST00000491502 CABP1Q9NZU7 370 aa18.6■□□□□ 0.57
NUP188-208ENST00000491502 ALS2Q96Q42 1657 aa18.59■□□□□ 0.57
NUP188-208ENST00000491502 CDK12Q9NYV4 1490 aaPredicted RBP18.58■□□□□ 0.57
NUP188-208ENST00000491502 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
NUP188-208ENST00000491502 PLEKHG5O94827 1062 aa18.58■□□□□ 0.56
NUP188-208ENST00000491502 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
NUP188-208ENST00000491502 UNC5CLQ8IV45 518 aa18.57■□□□□ 0.56
NUP188-208ENST00000491502 ZNF692Q9BU19 519 aaPredicted RBP18.57■□□□□ 0.56
NUP188-208ENST00000491502 BCL9LQ86UU0 1499 aa18.56■□□□□ 0.56
NUP188-208ENST00000491502 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
NUP188-208ENST00000491502 PUS7Q96PZ0 661 aaKnown RBP18.55■□□□□ 0.56
NUP188-208ENST00000491502 ATRNO75882 1429 aa18.55■□□□□ 0.56
NUP188-208ENST00000491502 SLIT2O94813 1529 aa18.54■□□□□ 0.56
NUP188-208ENST00000491502 TESK2Q96S53 571 aa18.54■□□□□ 0.56
NUP188-208ENST00000491502 FAM83GA6ND36 823 aa18.53■□□□□ 0.56
NUP188-208ENST00000491502 NLRP13Q86W25 1043 aa18.53■□□□□ 0.56
NUP188-208ENST00000491502 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
NUP188-208ENST00000491502 ABCA3Q99758 1704 aa18.52■□□□□ 0.56
NUP188-208ENST00000491502 C11orf95C9JLR9 678 aaPredicted RBP18.52■□□□□ 0.56
NUP188-208ENST00000491502 ANP32CO43423 234 aa18.52■□□□□ 0.56
NUP188-208ENST00000491502 GJD4Q96KN9 370 aaPredicted RBP18.52■□□□□ 0.56
NUP188-208ENST00000491502 NUTM2GQ5VZR2 741 aa18.51■□□□□ 0.55
NUP188-208ENST00000491502 USP6P35125 1406 aa18.5■□□□□ 0.55
NUP188-208ENST00000491502 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.5■□□□□ 0.55
NUP188-208ENST00000491502 VPS72Q15906 364 aa18.49■□□□□ 0.55
NUP188-208ENST00000491502 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
NUP188-208ENST00000491502 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
NUP188-208ENST00000491502 BTG4Q9NY30 223 aa18.48■□□□□ 0.55
NUP188-208ENST00000491502 CRYBG1Q9Y4K1 1723 aa18.47■□□□□ 0.55
NUP188-208ENST00000491502 NLRP6P59044 892 aa18.47■□□□□ 0.55
NUP188-208ENST00000491502 TMC1Q8TDI8 760 aa18.47■□□□□ 0.55
NUP188-208ENST00000491502 USP19O94966 1318 aa18.47■□□□□ 0.55
NUP188-208ENST00000491502 TTC21AQ8NDW8 1320 aa18.47■□□□□ 0.55
NUP188-208ENST00000491502 COL14A1Q05707 1796 aaKnown RBP18.46■□□□□ 0.55
NUP188-208ENST00000491502 ZC3H6P61129 1189 aaKnown RBP18.46■□□□□ 0.55
NUP188-208ENST00000491502 HDGFL2Q7Z4V5 671 aaPredicted RBP18.46■□□□□ 0.55
NUP188-208ENST00000491502 RGS12O14924 1447 aa18.46■□□□□ 0.55
NUP188-208ENST00000491502 CPSF1Q10570 1443 aaKnown RBP18.46■□□□□ 0.55
NUP188-208ENST00000491502 SSH2Q76I76 1423 aa18.46■□□□□ 0.55
NUP188-208ENST00000491502 TTC21BQ7Z4L5 1316 aa18.46■□□□□ 0.55
NUP188-208ENST00000491502 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
NUP188-208ENST00000491502 PLCH1Q4KWH8 1693 aa18.45■□□□□ 0.54
NUP188-208ENST00000491502 GCP02774 474 aa18.45■□□□□ 0.54
NUP188-208ENST00000491502 MIER1Q8N108 512 aa18.45■□□□□ 0.54
NUP188-208ENST00000491502 TERF2IPQ9NYB0 399 aa18.45■□□□□ 0.54
NUP188-208ENST00000491502 CCDC9Q9Y3X0 531 aaKnown RBP18.45■□□□□ 0.54
NUP188-208ENST00000491502 KIAA0232Q92628 1395 aa18.44■□□□□ 0.54
NUP188-208ENST00000491502 AKAP12Q02952 1782 aa18.43■□□□□ 0.54
NUP188-208ENST00000491502 PHRF1Q9P1Y6 1649 aaKnown RBP18.43■□□□□ 0.54
NUP188-208ENST00000491502 SLC12A5Q9H2X9 1139 aa18.43■□□□□ 0.54
NUP188-208ENST00000491502 CPDO75976 1380 aa18.42■□□□□ 0.54
NUP188-208ENST00000491502 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
NUP188-208ENST00000491502 ONECUT3O60422 494 aaPredicted RBP18.41■□□□□ 0.54
NUP188-208ENST00000491502 CHRNA2Q15822 529 aa18.41■□□□□ 0.54
NUP188-208ENST00000491502 UPF1Q92900 1129 aaKnown RBP eCLIP18.41■□□□□ 0.54
NUP188-208ENST00000491502 KCNH5Q8NCM2 988 aa18.4■□□□□ 0.54
NUP188-208ENST00000491502 GLI3P10071 1580 aa18.39■□□□□ 0.53
NUP188-208ENST00000491502 EVA1CP58658 441 aa18.39■□□□□ 0.53
NUP188-208ENST00000491502 NRAPQ86VF7 1730 aa18.38■□□□□ 0.53
NUP188-208ENST00000491502 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
NUP188-208ENST00000491502 CCER2I3L3R5 266 aa18.37■□□□□ 0.53
NUP188-208ENST00000491502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
NUP188-208ENST00000491502 SEPT12Q8IYM1 358 aa18.37■□□□□ 0.53
NUP188-208ENST00000491502 SPATA31A5Q5VU36 1347 aa18.37■□□□□ 0.53
NUP188-208ENST00000491502 SPATA31A7Q8IWB4 1347 aa18.37■□□□□ 0.53
NUP188-208ENST00000491502 CD163L1Q9NR16 1453 aa18.37■□□□□ 0.53
NUP188-208ENST00000491502 PIK3C2AO00443 1686 aa18.36■□□□□ 0.53
NUP188-208ENST00000491502 SLIT3O75094 1523 aa18.36■□□□□ 0.53
NUP188-208ENST00000491502 EDC4Q6P2E9 1401 aaKnown RBP18.36■□□□□ 0.53
NUP188-208ENST00000491502 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
NUP188-208ENST00000491502 STRN4Q9NRL3 753 aa18.36■□□□□ 0.53
NUP188-208ENST00000491502 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
NUP188-208ENST00000491502 A0A1W2PP64 1363 aa18.34■□□□□ 0.53
NUP188-208ENST00000491502 AATKQ6ZMQ8 1374 aa18.34■□□□□ 0.53
NUP188-208ENST00000491502 FAM98CQ17RN3 349 aaKnown RBP18.34■□□□□ 0.53
NUP188-208ENST00000491502 SPATA31A1Q5TZJ5 1347 aa18.33■□□□□ 0.53
NUP188-208ENST00000491502 ZBTB7CA1YPR0 619 aa18.33■□□□□ 0.52
NUP188-208ENST00000491502 ARHGEF25Q86VW2 580 aa18.33■□□□□ 0.52
NUP188-208ENST00000491502 PANK3Q9H999 370 aa18.33■□□□□ 0.52
NUP188-208ENST00000491502 CAMTA1Q9Y6Y1 1673 aa18.32■□□□□ 0.52
NUP188-208ENST00000491502 A0A0G2JS52 829 aa18.32■□□□□ 0.52
NUP188-208ENST00000491502 MYT1Q01538 1121 aa18.32■□□□□ 0.52
NUP188-208ENST00000491502 NME9Q86XW9 330 aa18.32■□□□□ 0.52
NUP188-208ENST00000491502 CCDC125Q86Z20 511 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms