RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 SPATA31A7Q8IWB4 1347 aa12.41□□□□□ -0.42
APOBEC3F-204ENST00000491387 CCDC9Q9Y3X0 531 aaKnown RBP12.41□□□□□ -0.42
APOBEC3F-204ENST00000491387 LRP5O75197 1615 aa12.4□□□□□ -0.42
APOBEC3F-204ENST00000491387 ATP7BP35670 1465 aa12.4□□□□□ -0.43
APOBEC3F-204ENST00000491387 THSD7AQ9UPZ6 1657 aa12.39□□□□□ -0.43
APOBEC3F-204ENST00000491387 DISP2A7MBM2 1401 aa12.39□□□□□ -0.43
APOBEC3F-204ENST00000491387 BAG6P46379 1132 aa12.39□□□□□ -0.43
APOBEC3F-204ENST00000491387 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
APOBEC3F-204ENST00000491387 NGDNQ8NEJ9 315 aaKnown RBP12.39□□□□□ -0.43
APOBEC3F-204ENST00000491387 KDM2AQ9Y2K7 1162 aa12.39□□□□□ -0.43
APOBEC3F-204ENST00000491387 ITSN1Q15811 1721 aa12.39□□□□□ -0.43
APOBEC3F-204ENST00000491387 ARHGEF28Q8N1W1 1705 aaKnown RBP12.39□□□□□ -0.43
APOBEC3F-204ENST00000491387 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
APOBEC3F-204ENST00000491387 POLR3AO14802 1390 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3F-204ENST00000491387 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
APOBEC3F-204ENST00000491387 PRDM11Q9NQV5 511 aa12.37□□□□□ -0.43
APOBEC3F-204ENST00000491387 RGPD1P0DJD0 1748 aa12.37□□□□□ -0.43
APOBEC3F-204ENST00000491387 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
APOBEC3F-204ENST00000491387 PLEKHG3A1L390 1219 aa12.36□□□□□ -0.43
APOBEC3F-204ENST00000491387 KIAA1210Q9ULL0 1709 aa12.36□□□□□ -0.43
APOBEC3F-204ENST00000491387 KIAA0232Q92628 1395 aa12.35□□□□□ -0.43
APOBEC3F-204ENST00000491387 CCDC61Q9Y6R9 512 aa12.35□□□□□ -0.43
APOBEC3F-204ENST00000491387 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
APOBEC3F-204ENST00000491387 A0A0G2JS52 829 aa12.34□□□□□ -0.43
APOBEC3F-204ENST00000491387 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3F-204ENST00000491387 MYT1Q01538 1121 aa12.34□□□□□ -0.43
APOBEC3F-204ENST00000491387 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
APOBEC3F-204ENST00000491387 BARGINQ6ZT62 677 aa12.34□□□□□ -0.43
APOBEC3F-204ENST00000491387 CDK19Q9BWU1 502 aa12.34□□□□□ -0.43
APOBEC3F-204ENST00000491387 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.43
APOBEC3F-204ENST00000491387 CPDO75976 1380 aa12.33□□□□□ -0.44
APOBEC3F-204ENST00000491387 TNS1Q9HBL0 1735 aaKnown RBP12.33□□□□□ -0.44
APOBEC3F-204ENST00000491387 BRD4O60885 1362 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3F-204ENST00000491387 EN1Q05925 392 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3F-204ENST00000491387 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
APOBEC3F-204ENST00000491387 USP19O94966 1318 aa12.32□□□□□ -0.44
APOBEC3F-204ENST00000491387 ACEP12821 1306 aa12.32□□□□□ -0.44
APOBEC3F-204ENST00000491387 PARD3Q8TEW0 1356 aa12.31□□□□□ -0.44
APOBEC3F-204ENST00000491387 CAMKK2Q96RR4 588 aa12.31□□□□□ -0.44
APOBEC3F-204ENST00000491387 SSH2Q76I76 1423 aa12.3□□□□□ -0.44
APOBEC3F-204ENST00000491387 LMO7Q8WWI1 1683 aa12.3□□□□□ -0.44
APOBEC3F-204ENST00000491387 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
APOBEC3F-204ENST00000491387 CHRNA2Q15822 529 aa12.3□□□□□ -0.44
APOBEC3F-204ENST00000491387 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
APOBEC3F-204ENST00000491387 NRKQ7Z2Y5 1582 aa12.3□□□□□ -0.44
APOBEC3F-204ENST00000491387 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
APOBEC3F-204ENST00000491387 ZC3H6P61129 1189 aaKnown RBP12.29□□□□□ -0.44
APOBEC3F-204ENST00000491387 ABTB2Q8N961 1025 aa12.28□□□□□ -0.44
APOBEC3F-204ENST00000491387 STRN4Q9NRL3 753 aa12.28□□□□□ -0.44
APOBEC3F-204ENST00000491387 THRAP3Q9Y2W1 955 aaKnown RBP12.28□□□□□ -0.44
APOBEC3F-204ENST00000491387 C11orf95C9JLR9 678 aaPredicted RBP12.27□□□□□ -0.45
APOBEC3F-204ENST00000491387 EZH2Q15910 746 aaKnown RBP12.27□□□□□ -0.45
APOBEC3F-204ENST00000491387 NBPF1Q3BBV0 1214 aa12.27□□□□□ -0.45
APOBEC3F-204ENST00000491387 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
APOBEC3F-204ENST00000491387 TCP11L2Q8N4U5 519 aa12.27□□□□□ -0.45
APOBEC3F-204ENST00000491387 TRIM37O94972 964 aa12.26□□□□□ -0.45
APOBEC3F-204ENST00000491387 GCP02774 474 aa12.26□□□□□ -0.45
APOBEC3F-204ENST00000491387 EVA1CP58658 441 aa12.26□□□□□ -0.45
APOBEC3F-204ENST00000491387 R3HDM1Q15032 1099 aaKnown RBP12.26□□□□□ -0.45
APOBEC3F-204ENST00000491387 NUTM2GQ5VZR2 741 aa12.26□□□□□ -0.45
APOBEC3F-204ENST00000491387 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
APOBEC3F-204ENST00000491387 CENPJQ9HC77 1338 aaPredicted RBP12.26□□□□□ -0.45
APOBEC3F-204ENST00000491387 PPIP5K1Q6PFW1 1433 aa12.26□□□□□ -0.45
APOBEC3F-204ENST00000491387 QRICH2Q9H0J4 1663 aa12.26□□□□□ -0.45
APOBEC3F-204ENST00000491387 PDE3BQ13370 1112 aa12.25□□□□□ -0.45
APOBEC3F-204ENST00000491387 APBA3O96018 575 aa12.24□□□□□ -0.45
APOBEC3F-204ENST00000491387 COL5A2P05997 1499 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3F-204ENST00000491387 AATKQ6ZMQ8 1374 aa12.24□□□□□ -0.45
APOBEC3F-204ENST00000491387 TRPM1Q7Z4N2 1603 aa12.24□□□□□ -0.45
APOBEC3F-204ENST00000491387 RREB1Q92766 1687 aa12.24□□□□□ -0.45
APOBEC3F-204ENST00000491387 PARP4Q9UKK3 1724 aaKnown RBP12.24□□□□□ -0.45
APOBEC3F-204ENST00000491387 SLIT3O75094 1523 aa12.23□□□□□ -0.45
APOBEC3F-204ENST00000491387 USP6P35125 1406 aa12.23□□□□□ -0.45
APOBEC3F-204ENST00000491387 CRB1P82279 1406 aa12.23□□□□□ -0.45
APOBEC3F-204ENST00000491387 SRPK2P78362 688 aaKnown RBP12.23□□□□□ -0.45
APOBEC3F-204ENST00000491387 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
APOBEC3F-204ENST00000491387 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
APOBEC3F-204ENST00000491387 NUP188Q5SRE5 1749 aa12.21□□□□□ -0.45
APOBEC3F-204ENST00000491387 PEAK1Q9H792 1746 aa12.21□□□□□ -0.45
APOBEC3F-204ENST00000491387 CABP1Q9NZU7 370 aa12.21□□□□□ -0.45
APOBEC3F-204ENST00000491387 BCL9O00512 1426 aa12.2□□□□□ -0.46
APOBEC3F-204ENST00000491387 COL18A1P39060 1754 aa12.2□□□□□ -0.46
APOBEC3F-204ENST00000491387 NLRP6P59044 892 aa12.2□□□□□ -0.46
APOBEC3F-204ENST00000491387 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
APOBEC3F-204ENST00000491387 RGPD3A6NKT7 1758 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3F-204ENST00000491387 RGPD4Q7Z3J3 1758 aa12.2□□□□□ -0.46
APOBEC3F-204ENST00000491387 PLSCR1O15162 318 aa12.19□□□□□ -0.46
APOBEC3F-204ENST00000491387 OVOS2A0A0G2JMS6 1433 aa12.19□□□□□ -0.46
APOBEC3F-204ENST00000491387 OVOS2A0A0J9YW53 1432 aa12.19□□□□□ -0.46
APOBEC3F-204ENST00000491387 OVOS2Q6IE36 1432 aa12.19□□□□□ -0.46
APOBEC3F-204ENST00000491387 EVC2Q86UK5 1308 aa12.18□□□□□ -0.46
APOBEC3F-204ENST00000491387 L3MBTL2Q969R5 705 aa12.18□□□□□ -0.46
APOBEC3F-204ENST00000491387 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3F-204ENST00000491387 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3F-204ENST00000491387 PIK3C2AO00443 1686 aa12.17□□□□□ -0.46
APOBEC3F-204ENST00000491387 SBF2Q86WG5 1849 aa12.17□□□□□ -0.46
APOBEC3F-204ENST00000491387 ARHGEF25Q86VW2 580 aa12.17□□□□□ -0.46
APOBEC3F-204ENST00000491387 WDR17Q8IZU2 1322 aa12.16□□□□□ -0.46
APOBEC3F-204ENST00000491387 LRRC37A3O60309 1634 aa12.16□□□□□ -0.46
APOBEC3F-204ENST00000491387 KCNH5Q8NCM2 988 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms