RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 COL14A1Q05707 1796 aaKnown RBP12.41□□□□□ -0.42
GABRE-211ENST00000491339 FNBP4Q8N3X1 1017 aaPredicted RBP12.4□□□□□ -0.42
GABRE-211ENST00000491339 NUDT16Q96DE0 195 aaKnown RBP12.4□□□□□ -0.42
GABRE-211ENST00000491339 CDK19Q9BWU1 502 aa12.4□□□□□ -0.42
GABRE-211ENST00000491339 RALGAPBQ86X10 1494 aa12.39□□□□□ -0.43
GABRE-211ENST00000491339 SLIT2O94813 1529 aa12.39□□□□□ -0.43
GABRE-211ENST00000491339 NRAPQ86VF7 1730 aa12.39□□□□□ -0.43
GABRE-211ENST00000491339 SRPK2P78362 688 aaKnown RBP12.39□□□□□ -0.43
GABRE-211ENST00000491339 PPIP5K1Q6PFW1 1433 aa12.38□□□□□ -0.43
GABRE-211ENST00000491339 BCL9LQ86UU0 1499 aa12.38□□□□□ -0.43
GABRE-211ENST00000491339 POLR3AO14802 1390 aaPredicted RBP12.38□□□□□ -0.43
GABRE-211ENST00000491339 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
GABRE-211ENST00000491339 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
GABRE-211ENST00000491339 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
GABRE-211ENST00000491339 AKAP12Q02952 1782 aa12.36□□□□□ -0.43
GABRE-211ENST00000491339 EVC2Q86UK5 1308 aa12.36□□□□□ -0.43
GABRE-211ENST00000491339 GLI3P10071 1580 aa12.36□□□□□ -0.43
GABRE-211ENST00000491339 NRKQ7Z2Y5 1582 aa12.36□□□□□ -0.43
GABRE-211ENST00000491339 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
GABRE-211ENST00000491339 CABLES1Q8TDN4 633 aa12.35□□□□□ -0.43
GABRE-211ENST00000491339 ATAD2Q6PL18 1390 aa12.35□□□□□ -0.43
GABRE-211ENST00000491339 ACEP12821 1306 aa12.35□□□□□ -0.43
GABRE-211ENST00000491339 BRD4O60885 1362 aaPredicted RBP12.34□□□□□ -0.43
GABRE-211ENST00000491339 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
GABRE-211ENST00000491339 SBNO2Q9Y2G9 1366 aa12.33□□□□□ -0.44
GABRE-211ENST00000491339 CARD11Q9BXL7 1154 aa12.33□□□□□ -0.44
GABRE-211ENST00000491339 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
GABRE-211ENST00000491339 BRWD3Q6RI45 1802 aa12.32□□□□□ -0.44
GABRE-211ENST00000491339 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
GABRE-211ENST00000491339 GJD4Q96KN9 370 aaPredicted RBP12.32□□□□□ -0.44
GABRE-211ENST00000491339 CCDC9Q9Y3X0 531 aaKnown RBP12.31□□□□□ -0.44
GABRE-211ENST00000491339 USP6P35125 1406 aa12.31□□□□□ -0.44
GABRE-211ENST00000491339 NBPF8Q3BBV2 869 aa12.31□□□□□ -0.44
GABRE-211ENST00000491339 PIK3C2AO00443 1686 aa12.31□□□□□ -0.44
GABRE-211ENST00000491339 UPF1Q92900 1129 aaKnown RBP eCLIP12.3□□□□□ -0.44
GABRE-211ENST00000491339 PRDM11Q9NQV5 511 aa12.3□□□□□ -0.44
GABRE-211ENST00000491339 VPS72Q15906 364 aa12.3□□□□□ -0.44
GABRE-211ENST00000491339 ABTB2Q8N961 1025 aa12.29□□□□□ -0.44
GABRE-211ENST00000491339 PCGF6Q9BYE7 350 aa12.29□□□□□ -0.44
GABRE-211ENST00000491339 KIAA0232Q92628 1395 aa12.28□□□□□ -0.44
GABRE-211ENST00000491339 BTG4Q9NY30 223 aa12.28□□□□□ -0.44
GABRE-211ENST00000491339 LMO7Q8WWI1 1683 aa12.27□□□□□ -0.44
GABRE-211ENST00000491339 SLIT3O75094 1523 aa12.27□□□□□ -0.44
GABRE-211ENST00000491339 FAM83GA6ND36 823 aa12.27□□□□□ -0.45
GABRE-211ENST00000491339 NUTM2GQ5VZR2 741 aa12.27□□□□□ -0.45
GABRE-211ENST00000491339 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
GABRE-211ENST00000491339 CABP1Q9NZU7 370 aa12.27□□□□□ -0.45
GABRE-211ENST00000491339 USP19O94966 1318 aa12.27□□□□□ -0.45
GABRE-211ENST00000491339 A0A0G2JS52 829 aa12.26□□□□□ -0.45
GABRE-211ENST00000491339 MYT1Q01538 1121 aa12.26□□□□□ -0.45
GABRE-211ENST00000491339 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
GABRE-211ENST00000491339 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
GABRE-211ENST00000491339 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
GABRE-211ENST00000491339 CPDO75976 1380 aa12.25□□□□□ -0.45
GABRE-211ENST00000491339 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
GABRE-211ENST00000491339 KTN1Q86UP2 1357 aaKnown RBP12.24□□□□□ -0.45
GABRE-211ENST00000491339 RGPD1P0DJD0 1748 aa12.24□□□□□ -0.45
GABRE-211ENST00000491339 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
GABRE-211ENST00000491339 ZC3H6P61129 1189 aaKnown RBP12.23□□□□□ -0.45
GABRE-211ENST00000491339 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
GABRE-211ENST00000491339 EP400Q96L91 3159 aa12.23□□□□□ -0.45
GABRE-211ENST00000491339 WNK3Q9BYP7 1800 aa12.23□□□□□ -0.45
GABRE-211ENST00000491339 SEPT12Q8IYM1 358 aa12.23□□□□□ -0.45
GABRE-211ENST00000491339 NINLQ9Y2I6 1382 aa12.23□□□□□ -0.45
GABRE-211ENST00000491339 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
GABRE-211ENST00000491339 SSH2Q76I76 1423 aa12.23□□□□□ -0.45
GABRE-211ENST00000491339 NLRP6P59044 892 aa12.22□□□□□ -0.45
GABRE-211ENST00000491339 CHRNA2Q15822 529 aa12.22□□□□□ -0.45
GABRE-211ENST00000491339 SPATA31A5Q5VU36 1347 aa12.22□□□□□ -0.45
GABRE-211ENST00000491339 SPATA31A7Q8IWB4 1347 aa12.22□□□□□ -0.45
GABRE-211ENST00000491339 ABCC6O95255 1503 aa12.22□□□□□ -0.45
GABRE-211ENST00000491339 STRN4Q9NRL3 753 aa12.22□□□□□ -0.45
GABRE-211ENST00000491339 LTN1O94822 1766 aa12.21□□□□□ -0.45
GABRE-211ENST00000491339 BLMP54132 1417 aaPredicted RBP12.21□□□□□ -0.45
GABRE-211ENST00000491339 USP47Q96K76 1375 aa12.21□□□□□ -0.45
GABRE-211ENST00000491339 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
GABRE-211ENST00000491339 HDGFL2Q7Z4V5 671 aaPredicted RBP12.21□□□□□ -0.45
GABRE-211ENST00000491339 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
GABRE-211ENST00000491339 TIMELESSQ9UNS1 1208 aa12.21□□□□□ -0.45
GABRE-211ENST00000491339 CAMTA1Q9Y6Y1 1673 aa12.21□□□□□ -0.46
GABRE-211ENST00000491339 TTC21BQ7Z4L5 1316 aa12.2□□□□□ -0.46
GABRE-211ENST00000491339 GCP02774 474 aa12.2□□□□□ -0.46
GABRE-211ENST00000491339 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
GABRE-211ENST00000491339 COL5A2P05997 1499 aaPredicted RBP12.2□□□□□ -0.46
GABRE-211ENST00000491339 RGPD5Q99666 1765 aa12.2□□□□□ -0.46
GABRE-211ENST00000491339 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
GABRE-211ENST00000491339 ZBTB7CA1YPR0 619 aa12.2□□□□□ -0.46
GABRE-211ENST00000491339 EVA1CP58658 441 aa12.2□□□□□ -0.46
GABRE-211ENST00000491339 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
GABRE-211ENST00000491339 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
GABRE-211ENST00000491339 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
GABRE-211ENST00000491339 SPATA31A1Q5TZJ5 1347 aa12.19□□□□□ -0.46
GABRE-211ENST00000491339 ONECUT3O60422 494 aaPredicted RBP12.19□□□□□ -0.46
GABRE-211ENST00000491339 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
GABRE-211ENST00000491339 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
GABRE-211ENST00000491339 PUS7Q96PZ0 661 aaKnown RBP12.19□□□□□ -0.46
GABRE-211ENST00000491339 TERF2IPQ9NYB0 399 aa12.19□□□□□ -0.46
GABRE-211ENST00000491339 NFAT5O94916 1531 aa12.19□□□□□ -0.46
GABRE-211ENST00000491339 COL18A1P39060 1754 aa12.19□□□□□ -0.46
GABRE-211ENST00000491339 CD163L1Q9NR16 1453 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms