RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ARMC2Q8NEN0 867 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 FAM174AQ8TBP5 190 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 DDRGK1Q96HY6 314 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 AAASQ9NRG9 546 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 TOR4AQ9NXH8 423 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 LIMD1Q9UGP4 676 aa3.95□□□□□ -1.78
SNRNP40-207ENST00000491106 POTECB2RU33 542 aa3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 SMPD1P17405 629 aa3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 VARSP26640 1264 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 GJA5P36382 358 aa3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 SKOR1P84550 965 aa3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 QPCTQ16769 361 aa3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 CTC1Q2NKJ3 1217 aa3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 RTL5Q5HYW3 569 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 HPS1Q92902 700 aa3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 CARD14Q9BXL6 1004 aa3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 FAM117AQ9C073 453 aa3.94□□□□□ -1.78
SNRNP40-207ENST00000491106 CAPN5O15484 640 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 CTDSPL2Q05D32 466 aa3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 SKIV2LQ15477 1246 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 TPRNQ4KMQ1 711 aa3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 DESI1Q6ICB0 168 aa3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 BPHLQ86WA6 291 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 ZNF511Q8NB15 262 aa3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 PROCA1Q8NCQ7 364 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 PNMA1Q8ND90 353 aa3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 FOXJ1Q92949 421 aa3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 PCMTD1Q96MG8 357 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 SENP2Q9HC62 589 aa3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 MAP10Q9P2G4 905 aa3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 GMPR2Q9P2T1 348 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 DACH1Q9UI36 760 aa3.93□□□□□ -1.78
SNRNP40-207ENST00000491106 PER1O15534 1290 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-207ENST00000491106 UPP2O95045 317 aa3.92□□□□□ -1.78
SNRNP40-207ENST00000491106 SCARF1Q14162 830 aa3.92□□□□□ -1.78
SNRNP40-207ENST00000491106 ZBTB33Q86T24 672 aa3.92□□□□□ -1.78
SNRNP40-207ENST00000491106 ZNF775Q96BV0 537 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-207ENST00000491106 LCE2BO14633 110 aa3.91□□□□□ -1.78
SNRNP40-207ENST00000491106 LILRB3O75022 631 aa3.91□□□□□ -1.78
SNRNP40-207ENST00000491106 NBPF14Q5TI25 921 aa3.91□□□□□ -1.78
SNRNP40-207ENST00000491106 VASH1Q7L8A9 365 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-207ENST00000491106 ATP13A2Q9NQ11 1180 aa3.91□□□□□ -1.78
SNRNP40-207ENST00000491106 TLL2Q9Y6L7 1015 aa3.91□□□□□ -1.78
SNRNP40-207ENST00000491106 WDR4P57081 412 aaKnown RBP3.9□□□□□ -1.79
SNRNP40-207ENST00000491106 RAB15P59190 212 aa3.9□□□□□ -1.79
SNRNP40-207ENST00000491106 NNTQ13423 1086 aa3.9□□□□□ -1.79
SNRNP40-207ENST00000491106 ARHGAP9Q9BRR9 750 aa3.9□□□□□ -1.79
SNRNP40-207ENST00000491106 ESF1Q9H501 851 aaKnown RBP3.9□□□□□ -1.79
SNRNP40-207ENST00000491106 AVPP01185 164 aa3.89□□□□□ -1.79
SNRNP40-207ENST00000491106 BMP1P13497 986 aa3.89□□□□□ -1.79
SNRNP40-207ENST00000491106 NR6A1Q15406 480 aa3.89□□□□□ -1.79
SNRNP40-207ENST00000491106 C6orf118Q5T5N4 469 aa3.89□□□□□ -1.79
SNRNP40-207ENST00000491106 SLC16A10Q8TF71 515 aa3.89□□□□□ -1.79
SNRNP40-207ENST00000491106 LRRN4Q8WUT4 740 aa3.89□□□□□ -1.79
SNRNP40-207ENST00000491106 KIFC2Q96AC6 838 aa3.89□□□□□ -1.79
SNRNP40-207ENST00000491106 SIAH2O43255 324 aa3.88□□□□□ -1.79
SNRNP40-207ENST00000491106 ZIC2O95409 532 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-207ENST00000491106 BMP2P12643 396 aa3.88□□□□□ -1.79
SNRNP40-207ENST00000491106 SMCPP49901 116 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-207ENST00000491106 PTK2Q05397 1052 aa3.88□□□□□ -1.79
SNRNP40-207ENST00000491106 SH3D19Q5HYK7 790 aa3.88□□□□□ -1.79
SNRNP40-207ENST00000491106 PURBQ96QR8 312 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-207ENST00000491106 MAN1A2O60476 641 aa3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 WFS1O76024 890 aa3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 ADH1CP00326 375 aa3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 SNRPBP14678 240 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 NR5A1Q13285 461 aa3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 TUSC1Q2TAM9 212 aa3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 DZIP3Q86Y13 1208 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 CRIPAKQ8N1N5 446 aa3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 SLC10A4Q96EP9 437 aa3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 FKBPLQ9UIM3 349 aa3.87□□□□□ -1.79
SNRNP40-207ENST00000491106 F12P00748 615 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-207ENST00000491106 FSHRP23945 695 aa3.86□□□□□ -1.79
SNRNP40-207ENST00000491106 TMEM259Q4ZIN3 620 aa3.86□□□□□ -1.79
SNRNP40-207ENST00000491106 ZFP42Q96MM3 310 aa3.86□□□□□ -1.79
SNRNP40-207ENST00000491106 RFC5P40937 340 aa3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 VEGFBP49765 207 aa3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 MRPL14Q6P1L8 145 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 PDXDC2PQ6P474 469 aa3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 TREML4Q6UXN2 200 aa3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 GPKOWQ92917 476 aaPredicted RBP eCLIP3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 TRIM47Q96LD4 638 aa3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 ZFAND3Q9H8U3 227 aa3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 PRM3Q9NNZ6 103 aa3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 PGPEP1Q9NXJ5 209 aa3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 EMILIN1Q9Y6C2 1016 aa3.85□□□□□ -1.79
SNRNP40-207ENST00000491106 FIGNL2A6NMB9 653 aa3.84□□□□□ -1.79
SNRNP40-207ENST00000491106 USP17L8P0C7I0 530 aa3.84□□□□□ -1.79
SNRNP40-207ENST00000491106 DHX9Q08211 1270 aaKnown RBP3.84□□□□□ -1.79
SNRNP40-207ENST00000491106 CCDC116Q8IYX3 515 aa3.84□□□□□ -1.79
SNRNP40-207ENST00000491106 ITPKCQ96DU7 683 aa3.84□□□□□ -1.79
SNRNP40-207ENST00000491106 KCTD15Q96SI1 283 aaPredicted RBP3.84□□□□□ -1.79
SNRNP40-207ENST00000491106 PCDHB9Q9Y5E1 797 aa3.84□□□□□ -1.79
SNRNP40-207ENST00000491106 SOBPA7XYQ1 873 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 TERTO14746 1132 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 TIMP2P16035 220 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 GRM5P41594 1212 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 RELBQ01201 579 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 ERFEQ4G0M1 354 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms