RNA–Protein interactions for RNA: ENST00000490875.5

TFAP2A-217, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 3

Gene TFAP2A, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-217ENST00000490875 COL14A1Q05707 1796 aaKnown RBP22.48■■□□□ 1.19
TFAP2A-217ENST00000490875 PLEKHG5O94827 1062 aa22.48■■□□□ 1.19
TFAP2A-217ENST00000490875 BRWD3Q6RI45 1802 aa22.45■■□□□ 1.19
TFAP2A-217ENST00000490875 NGDNQ8NEJ9 315 aaKnown RBP22.45■■□□□ 1.18
TFAP2A-217ENST00000490875 VPS72Q15906 364 aa22.44■■□□□ 1.18
TFAP2A-217ENST00000490875 PHRF1Q9P1Y6 1649 aaKnown RBP22.43■■□□□ 1.18
TFAP2A-217ENST00000490875 NBPF8Q3BBV2 869 aa22.41■■□□□ 1.18
TFAP2A-217ENST00000490875 CCDC9Q9Y3X0 531 aaKnown RBP22.41■■□□□ 1.18
TFAP2A-217ENST00000490875 QRICH2Q9H0J4 1663 aa22.4■■□□□ 1.18
TFAP2A-217ENST00000490875 CCDC125Q86Z20 511 aa22.4■■□□□ 1.18
TFAP2A-217ENST00000490875 NUDT16Q96DE0 195 aaKnown RBP22.4■■□□□ 1.18
TFAP2A-217ENST00000490875 PAK3O75914 559 aaPredicted RBP22.39■■□□□ 1.17
TFAP2A-217ENST00000490875 ROCK2O75116 1388 aaKnown RBP22.38■■□□□ 1.17
TFAP2A-217ENST00000490875 BLMP54132 1417 aaPredicted RBP22.38■■□□□ 1.17
TFAP2A-217ENST00000490875 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
TFAP2A-217ENST00000490875 FAM83GA6ND36 823 aa22.37■■□□□ 1.17
TFAP2A-217ENST00000490875 NBPF1Q3BBV0 1214 aa22.37■■□□□ 1.17
TFAP2A-217ENST00000490875 SEPT12Q8IYM1 358 aa22.36■■□□□ 1.17
TFAP2A-217ENST00000490875 CDK19Q9BWU1 502 aa22.36■■□□□ 1.17
TFAP2A-217ENST00000490875 BTG4Q9NY30 223 aa22.34■■□□□ 1.17
TFAP2A-217ENST00000490875 TRPM1Q7Z4N2 1603 aa22.34■■□□□ 1.17
TFAP2A-217ENST00000490875 NRKQ7Z2Y5 1582 aa22.33■■□□□ 1.17
TFAP2A-217ENST00000490875 CENPJQ9HC77 1338 aaPredicted RBP22.33■■□□□ 1.17
TFAP2A-217ENST00000490875 A0A0G2JS52 829 aa22.33■■□□□ 1.17
TFAP2A-217ENST00000490875 MYT1Q01538 1121 aa22.33■■□□□ 1.17
TFAP2A-217ENST00000490875 PRDM11Q9NQV5 511 aa22.33■■□□□ 1.17
TFAP2A-217ENST00000490875 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
TFAP2A-217ENST00000490875 CCDC61Q9Y6R9 512 aa22.32■■□□□ 1.16
TFAP2A-217ENST00000490875 ACEP12821 1306 aa22.31■■□□□ 1.16
TFAP2A-217ENST00000490875 THSD7AQ9UPZ6 1657 aa22.31■■□□□ 1.16
TFAP2A-217ENST00000490875 ONECUT3O60422 494 aaPredicted RBP22.31■■□□□ 1.16
TFAP2A-217ENST00000490875 ZEB1P37275 1124 aaPredicted RBP22.31■■□□□ 1.16
TFAP2A-217ENST00000490875 KIAA0232Q92628 1395 aa22.3■■□□□ 1.16
TFAP2A-217ENST00000490875 KRT27Q7Z3Y8 459 aa22.3■■□□□ 1.16
TFAP2A-217ENST00000490875 PPIP5K1Q6PFW1 1433 aa22.3■■□□□ 1.16
TFAP2A-217ENST00000490875 SF3B2Q13435 895 aaKnown RBP22.29■■□□□ 1.16
TFAP2A-217ENST00000490875 ZRANB1Q9UGI0 708 aa22.29■■□□□ 1.16
TFAP2A-217ENST00000490875 PLEKHG3A1L390 1219 aa22.28■■□□□ 1.16
TFAP2A-217ENST00000490875 SRPK2P78362 688 aaKnown RBP22.28■■□□□ 1.16
TFAP2A-217ENST00000490875 RGPD1P0DJD0 1748 aa22.27■■□□□ 1.16
TFAP2A-217ENST00000490875 FAM98CQ17RN3 349 aaKnown RBP22.27■■□□□ 1.16
TFAP2A-217ENST00000490875 SPATA31A5Q5VU36 1347 aa22.27■■□□□ 1.16
TFAP2A-217ENST00000490875 SPATA31A7Q8IWB4 1347 aa22.27■■□□□ 1.16
TFAP2A-217ENST00000490875 BRD4O60885 1362 aaPredicted RBP22.25■■□□□ 1.15
TFAP2A-217ENST00000490875 LMO7Q8WWI1 1683 aa22.23■■□□□ 1.15
TFAP2A-217ENST00000490875 NUTM2GQ5VZR2 741 aa22.23■■□□□ 1.15
TFAP2A-217ENST00000490875 USP19O94966 1318 aa22.23■■□□□ 1.15
TFAP2A-217ENST00000490875 CHRNA2Q15822 529 aa22.21■■□□□ 1.15
TFAP2A-217ENST00000490875 ABTB2Q8N961 1025 aa22.21■■□□□ 1.15
TFAP2A-217ENST00000490875 CABP2Q9NPB3 220 aa22.21■■□□□ 1.15
TFAP2A-217ENST00000490875 CPDO75976 1380 aa22.21■■□□□ 1.15
TFAP2A-217ENST00000490875 SSH2Q76I76 1423 aa22.21■■□□□ 1.15
TFAP2A-217ENST00000490875 USP6P35125 1406 aa22.2■■□□□ 1.14
TFAP2A-217ENST00000490875 ZC3H6P61129 1189 aaKnown RBP22.19■■□□□ 1.14
TFAP2A-217ENST00000490875 DEFB132Q7Z7B7 95 aa22.19■■□□□ 1.14
TFAP2A-217ENST00000490875 STRN4Q9NRL3 753 aa22.19■■□□□ 1.14
TFAP2A-217ENST00000490875 SPATA31A1Q5TZJ5 1347 aa22.19■■□□□ 1.14
TFAP2A-217ENST00000490875 TNS1Q9HBL0 1735 aaKnown RBP22.19■■□□□ 1.14
TFAP2A-217ENST00000490875 EVC2Q86UK5 1308 aa22.18■■□□□ 1.14
TFAP2A-217ENST00000490875 PIK3C2AO00443 1686 aa22.17■■□□□ 1.14
TFAP2A-217ENST00000490875 SLIT3O75094 1523 aa22.17■■□□□ 1.14
TFAP2A-217ENST00000490875 AKAP12Q02952 1782 aa22.17■■□□□ 1.14
TFAP2A-217ENST00000490875 CAMTA1Q9Y6Y1 1673 aa22.17■■□□□ 1.14
TFAP2A-217ENST00000490875 USP47Q96K76 1375 aa22.16■■□□□ 1.14
TFAP2A-217ENST00000490875 BAG6P46379 1132 aa22.16■■□□□ 1.14
TFAP2A-217ENST00000490875 NLRP13Q86W25 1043 aa22.16■■□□□ 1.14
TFAP2A-217ENST00000490875 SRCAPQ6ZRS2 3230 aa22.14■■□□□ 1.14
TFAP2A-217ENST00000490875 DISP2A7MBM2 1401 aa22.14■■□□□ 1.13
TFAP2A-217ENST00000490875 EVA1CP58658 441 aa22.13■■□□□ 1.13
TFAP2A-217ENST00000490875 CABP1Q9NZU7 370 aa22.13■■□□□ 1.13
TFAP2A-217ENST00000490875 COL5A2P05997 1499 aaPredicted RBP22.13■■□□□ 1.13
TFAP2A-217ENST00000490875 EIF4G2P78344 907 aaKnown RBP eCLIP22.12■■□□□ 1.13
TFAP2A-217ENST00000490875 LRP5O75197 1615 aa22.11■■□□□ 1.13
TFAP2A-217ENST00000490875 GCP02774 474 aa22.11■■□□□ 1.13
TFAP2A-217ENST00000490875 PARP4Q9UKK3 1724 aaKnown RBP22.11■■□□□ 1.13
TFAP2A-217ENST00000490875 ST20-MTHFSA0A0A6YYL1 179 aa22.1■■□□□ 1.13
TFAP2A-217ENST00000490875 BARGINQ6ZT62 677 aa22.1■■□□□ 1.13
TFAP2A-217ENST00000490875 USP35Q9P2H5 1018 aa22.1■■□□□ 1.13
TFAP2A-217ENST00000490875 SBNO2Q9Y2G9 1366 aa22.1■■□□□ 1.13
TFAP2A-217ENST00000490875 MON2Q7Z3U7 1717 aa22.09■■□□□ 1.13
TFAP2A-217ENST00000490875 FAM182BQ5T319 152 aa22.08■■□□□ 1.13
TFAP2A-217ENST00000490875 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
TFAP2A-217ENST00000490875 CRB1P82279 1406 aa22.07■■□□□ 1.12
TFAP2A-217ENST00000490875 HSPA5P11021 654 aaKnown RBP22.07■■□□□ 1.12
TFAP2A-217ENST00000490875 NLRP6P59044 892 aa22.07■■□□□ 1.12
TFAP2A-217ENST00000490875 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
TFAP2A-217ENST00000490875 WNK3Q9BYP7 1800 aa22.07■■□□□ 1.12
TFAP2A-217ENST00000490875 FAM196AQ6ZSG2 479 aa22.06■■□□□ 1.12
TFAP2A-217ENST00000490875 THRAP3Q9Y2W1 955 aaKnown RBP22.06■■□□□ 1.12
TFAP2A-217ENST00000490875 AATKQ6ZMQ8 1374 aa22.06■■□□□ 1.12
TFAP2A-217ENST00000490875 CPSF1Q10570 1443 aaKnown RBP22.06■■□□□ 1.12
TFAP2A-217ENST00000490875 LRRC37A3O60309 1634 aa22.05■■□□□ 1.12
TFAP2A-217ENST00000490875 ZBTB7CA1YPR0 619 aa22.04■■□□□ 1.12
TFAP2A-217ENST00000490875 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
TFAP2A-217ENST00000490875 ZNF692Q9BU19 519 aaPredicted RBP22.04■■□□□ 1.12
TFAP2A-217ENST00000490875 COL18A1P39060 1754 aa22.04■■□□□ 1.12
TFAP2A-217ENST00000490875 TTC21AQ8NDW8 1320 aa22.04■■□□□ 1.12
TFAP2A-217ENST00000490875 ABCC6O95255 1503 aa22.03■■□□□ 1.12
TFAP2A-217ENST00000490875 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.12
TFAP2A-217ENST00000490875 USP54Q70EL1 1684 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms