RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 ABTB2Q8N961 1025 aa18.65■□□□□ 0.58
SHC1-211ENST00000490667 GJD4Q96KN9 370 aaPredicted RBP18.65■□□□□ 0.58
SHC1-211ENST00000490667 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
SHC1-211ENST00000490667 CLSPNQ9HAW4 1339 aa18.64■□□□□ 0.57
SHC1-211ENST00000490667 SLIT2O94813 1529 aa18.64■□□□□ 0.57
SHC1-211ENST00000490667 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
SHC1-211ENST00000490667 TRPM3Q9HCF6 1732 aaPredicted RBP18.62■□□□□ 0.57
SHC1-211ENST00000490667 QRICH2Q9H0J4 1663 aa18.61■□□□□ 0.57
SHC1-211ENST00000490667 RGS12O14924 1447 aa18.61■□□□□ 0.57
SHC1-211ENST00000490667 VPS72Q15906 364 aa18.61■□□□□ 0.57
SHC1-211ENST00000490667 ZNF692Q9BU19 519 aaPredicted RBP18.61■□□□□ 0.57
SHC1-211ENST00000490667 BTG4Q9NY30 223 aa18.61■□□□□ 0.57
SHC1-211ENST00000490667 BRD4O60885 1362 aaPredicted RBP18.6■□□□□ 0.57
SHC1-211ENST00000490667 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
SHC1-211ENST00000490667 NLRP13Q86W25 1043 aa18.6■□□□□ 0.57
SHC1-211ENST00000490667 UPF1Q92900 1129 aaKnown RBP eCLIP18.6■□□□□ 0.577e-7■■■■■ 29.1
SHC1-211ENST00000490667 ITSN1Q15811 1721 aa18.6■□□□□ 0.57
SHC1-211ENST00000490667 ATAD2Q6PL18 1390 aa18.59■□□□□ 0.57
SHC1-211ENST00000490667 ST20-MTHFSA0A0A6YYL1 179 aa18.59■□□□□ 0.57
SHC1-211ENST00000490667 ZC3H6P61129 1189 aaKnown RBP18.59■□□□□ 0.57
SHC1-211ENST00000490667 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
SHC1-211ENST00000490667 CCDC9Q9Y3X0 531 aaKnown RBP18.59■□□□□ 0.57
SHC1-211ENST00000490667 TOPAZ1Q8N9V7 1692 aa18.58■□□□□ 0.57
SHC1-211ENST00000490667 ALS2Q96Q42 1657 aa18.58■□□□□ 0.57
SHC1-211ENST00000490667 CCER1Q8TC90 406 aaPredicted RBP18.58■□□□□ 0.56
SHC1-211ENST00000490667 USP6P35125 1406 aa18.57■□□□□ 0.56
SHC1-211ENST00000490667 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
SHC1-211ENST00000490667 NLRP6P59044 892 aa18.56■□□□□ 0.56
SHC1-211ENST00000490667 CHRNA2Q15822 529 aa18.56■□□□□ 0.56
SHC1-211ENST00000490667 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
SHC1-211ENST00000490667 GCP02774 474 aa18.55■□□□□ 0.56
SHC1-211ENST00000490667 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
SHC1-211ENST00000490667 PUS7Q96PZ0 661 aaKnown RBP18.55■□□□□ 0.56
SHC1-211ENST00000490667 TESK2Q96S53 571 aa18.55■□□□□ 0.56
SHC1-211ENST00000490667 MARF1Q9Y4F3 1742 aaKnown RBP18.54■□□□□ 0.56
SHC1-211ENST00000490667 USP19O94966 1318 aa18.54■□□□□ 0.56
SHC1-211ENST00000490667 TTC21BQ7Z4L5 1316 aa18.54■□□□□ 0.56
SHC1-211ENST00000490667 ONECUT3O60422 494 aaPredicted RBP18.53■□□□□ 0.56
SHC1-211ENST00000490667 SSH2Q76I76 1423 aa18.53■□□□□ 0.56
SHC1-211ENST00000490667 SLC12A5Q9H2X9 1139 aa18.53■□□□□ 0.56
SHC1-211ENST00000490667 SEPT12Q8IYM1 358 aa18.52■□□□□ 0.56
SHC1-211ENST00000490667 CPSF1Q10570 1443 aaKnown RBP18.51■□□□□ 0.55
SHC1-211ENST00000490667 KTN1Q86UP2 1357 aaKnown RBP18.51■□□□□ 0.55
SHC1-211ENST00000490667 EVA1CP58658 441 aa18.5■□□□□ 0.55
SHC1-211ENST00000490667 HDGFL2Q7Z4V5 671 aaPredicted RBP18.5■□□□□ 0.55
SHC1-211ENST00000490667 STRN4Q9NRL3 753 aa18.5■□□□□ 0.55
SHC1-211ENST00000490667 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
SHC1-211ENST00000490667 ABCA3Q99758 1704 aa18.49■□□□□ 0.55
SHC1-211ENST00000490667 TERF2IPQ9NYB0 399 aa18.49■□□□□ 0.55
SHC1-211ENST00000490667 CPDO75976 1380 aa18.49■□□□□ 0.55
SHC1-211ENST00000490667 USP47Q96K76 1375 aa18.49■□□□□ 0.55
SHC1-211ENST00000490667 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
SHC1-211ENST00000490667 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
SHC1-211ENST00000490667 FAM98CQ17RN3 349 aaKnown RBP18.48■□□□□ 0.55
SHC1-211ENST00000490667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHC1-211ENST00000490667 GLI3P10071 1580 aa18.47■□□□□ 0.55
SHC1-211ENST00000490667 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
SHC1-211ENST00000490667 A0A0G2JS52 829 aa18.47■□□□□ 0.55
SHC1-211ENST00000490667 ZBTB7CA1YPR0 619 aa18.47■□□□□ 0.55
SHC1-211ENST00000490667 TMF1P82094 1093 aa18.47■□□□□ 0.55
SHC1-211ENST00000490667 MYT1Q01538 1121 aa18.47■□□□□ 0.55
SHC1-211ENST00000490667 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
SHC1-211ENST00000490667 KCNH5Q8NCM2 988 aa18.45■□□□□ 0.54
SHC1-211ENST00000490667 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
SHC1-211ENST00000490667 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
SHC1-211ENST00000490667 PLCH1Q4KWH8 1693 aa18.44■□□□□ 0.54
SHC1-211ENST00000490667 CRYBG1Q9Y4K1 1723 aa18.44■□□□□ 0.54
SHC1-211ENST00000490667 KRT27Q7Z3Y8 459 aa18.44■□□□□ 0.54
SHC1-211ENST00000490667 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
SHC1-211ENST00000490667 SOX12O15370 315 aa18.43■□□□□ 0.54
SHC1-211ENST00000490667 LARP1Q6PKG0 1096 aaKnown RBP18.43■□□□□ 0.54
SHC1-211ENST00000490667 NME9Q86XW9 330 aa18.43■□□□□ 0.54
SHC1-211ENST00000490667 CD163L1Q9NR16 1453 aa18.43■□□□□ 0.54
SHC1-211ENST00000490667 PHRF1Q9P1Y6 1649 aaKnown RBP18.42■□□□□ 0.54
SHC1-211ENST00000490667 CDCA8Q53HL2 280 aa18.42■□□□□ 0.54
SHC1-211ENST00000490667 ARHGEF25Q86VW2 580 aa18.42■□□□□ 0.54
SHC1-211ENST00000490667 CCDC125Q86Z20 511 aa18.42■□□□□ 0.54
SHC1-211ENST00000490667 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
SHC1-211ENST00000490667 NRKQ7Z2Y5 1582 aa18.41■□□□□ 0.54
SHC1-211ENST00000490667 A0A1W2PP64 1363 aa18.41■□□□□ 0.54
SHC1-211ENST00000490667 AATKQ6ZMQ8 1374 aa18.41■□□□□ 0.54
SHC1-211ENST00000490667 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
SHC1-211ENST00000490667 CAMTA1Q9Y6Y1 1673 aa18.4■□□□□ 0.54
SHC1-211ENST00000490667 USP31Q70CQ4 1352 aa18.4■□□□□ 0.54
SHC1-211ENST00000490667 SLIT3O75094 1523 aa18.39■□□□□ 0.54
SHC1-211ENST00000490667 AXIN2Q9Y2T1 843 aa18.39■□□□□ 0.53
SHC1-211ENST00000490667 EDC4Q6P2E9 1401 aaKnown RBP18.39■□□□□ 0.53
SHC1-211ENST00000490667 NRAPQ86VF7 1730 aa18.38■□□□□ 0.53
SHC1-211ENST00000490667 BARGINQ6ZT62 677 aa18.38■□□□□ 0.53
SHC1-211ENST00000490667 TCP11L2Q8N4U5 519 aa18.38■□□□□ 0.53
SHC1-211ENST00000490667 PIK3C2AO00443 1686 aa18.37■□□□□ 0.53
SHC1-211ENST00000490667 THRAP3Q9Y2W1 955 aaKnown RBP18.36■□□□□ 0.53
SHC1-211ENST00000490667 AKAP12Q02952 1782 aa18.35■□□□□ 0.53
SHC1-211ENST00000490667 EIF4G2P78344 907 aaKnown RBP eCLIP18.35■□□□□ 0.53
SHC1-211ENST00000490667 COL5A2P05997 1499 aaPredicted RBP18.34■□□□□ 0.53
SHC1-211ENST00000490667 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
SHC1-211ENST00000490667 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
SHC1-211ENST00000490667 TOM1L2Q6ZVM7 507 aa18.34■□□□□ 0.53
SHC1-211ENST00000490667 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
SHC1-211ENST00000490667 LMO7Q8WWI1 1683 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms