RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 EP400Q96L91 3159 aa14.93□□□□□ -0.02
TTC28-207ENST00000490475 FAM83GA6ND36 823 aa14.92□□□□□ -0.02
TTC28-207ENST00000490475 SEPT12Q8IYM1 358 aa14.92□□□□□ -0.02
TTC28-207ENST00000490475 CDK19Q9BWU1 502 aa14.91□□□□□ -0.02
TTC28-207ENST00000490475 PCGF6Q9BYE7 350 aa14.91□□□□□ -0.02
TTC28-207ENST00000490475 POLR3AO14802 1390 aaPredicted RBP14.9□□□□□ -0.02
TTC28-207ENST00000490475 BRD4O60885 1362 aaPredicted RBP14.9□□□□□ -0.02
TTC28-207ENST00000490475 PLEKHG5O94827 1062 aa14.9□□□□□ -0.02
TTC28-207ENST00000490475 KRT27Q7Z3Y8 459 aa14.9□□□□□ -0.02
TTC28-207ENST00000490475 BTG4Q9NY30 223 aa14.9□□□□□ -0.02
TTC28-207ENST00000490475 BRWD3Q6RI45 1802 aa14.89□□□□□ -0.03
TTC28-207ENST00000490475 PLEKHG3A1L390 1219 aa14.89□□□□□ -0.03
TTC28-207ENST00000490475 PRDM11Q9NQV5 511 aa14.89□□□□□ -0.03
TTC28-207ENST00000490475 TOPAZ1Q8N9V7 1692 aa14.88□□□□□ -0.03
TTC28-207ENST00000490475 A0A0G2JS52 829 aa14.88□□□□□ -0.03
TTC28-207ENST00000490475 MYT1Q01538 1121 aa14.88□□□□□ -0.03
TTC28-207ENST00000490475 NRAPQ86VF7 1730 aa14.88□□□□□ -0.03
TTC28-207ENST00000490475 CENPJQ9HC77 1338 aaPredicted RBP14.88□□□□□ -0.03
TTC28-207ENST00000490475 CRYBG1Q9Y4K1 1723 aa14.87□□□□□ -0.03
TTC28-207ENST00000490475 SIN3AQ96ST3 1273 aa14.87□□□□□ -0.03
TTC28-207ENST00000490475 ACEP12821 1306 aa14.87□□□□□ -0.03
TTC28-207ENST00000490475 NBPF8Q3BBV2 869 aa14.86□□□□□ -0.03
TTC28-207ENST00000490475 SRPK2P78362 688 aaKnown RBP14.85□□□□□ -0.03
TTC28-207ENST00000490475 SPATA31A5Q5VU36 1347 aa14.85□□□□□ -0.03
TTC28-207ENST00000490475 SPATA31A7Q8IWB4 1347 aa14.85□□□□□ -0.03
TTC28-207ENST00000490475 NEUROD1Q13562 356 aa14.84□□□□□ -0.03
TTC28-207ENST00000490475 FAM98CQ17RN3 349 aaKnown RBP14.84□□□□□ -0.03
TTC28-207ENST00000490475 NBPF1Q3BBV0 1214 aa14.84□□□□□ -0.03
TTC28-207ENST00000490475 NLRP13Q86W25 1043 aa14.84□□□□□ -0.03
TTC28-207ENST00000490475 ABTB2Q8N961 1025 aa14.84□□□□□ -0.03
TTC28-207ENST00000490475 BAG6P46379 1132 aa14.83□□□□□ -0.04
TTC28-207ENST00000490475 PHRF1Q9P1Y6 1649 aaKnown RBP14.83□□□□□ -0.04
TTC28-207ENST00000490475 KIAA0232Q92628 1395 aa14.83□□□□□ -0.04
TTC28-207ENST00000490475 EVC2Q86UK5 1308 aa14.82□□□□□ -0.04
TTC28-207ENST00000490475 PPIP5K1Q6PFW1 1433 aa14.82□□□□□ -0.04
TTC28-207ENST00000490475 QRICH2Q9H0J4 1663 aa14.81□□□□□ -0.04
TTC28-207ENST00000490475 L3MBTL2Q969R5 705 aa14.81□□□□□ -0.04
TTC28-207ENST00000490475 CPDO75976 1380 aa14.81□□□□□ -0.04
TTC28-207ENST00000490475 EVA1CP58658 441 aa14.8□□□□□ -0.04
TTC28-207ENST00000490475 SPATA31A1Q5TZJ5 1347 aa14.8□□□□□ -0.04
TTC28-207ENST00000490475 C11orf95C9JLR9 678 aaPredicted RBP14.79□□□□□ -0.04
TTC28-207ENST00000490475 USP19O94966 1318 aa14.79□□□□□ -0.04
TTC28-207ENST00000490475 RGPD1P0DJD0 1748 aa14.79□□□□□ -0.04
TTC28-207ENST00000490475 ZC3H6P61129 1189 aaKnown RBP14.79□□□□□ -0.04
TTC28-207ENST00000490475 THSD7AQ9UPZ6 1657 aa14.79□□□□□ -0.04
TTC28-207ENST00000490475 TRPM1Q7Z4N2 1603 aa14.78□□□□□ -0.04
TTC28-207ENST00000490475 ROCK2O75116 1388 aaKnown RBP14.78□□□□□ -0.04
TTC28-207ENST00000490475 BARGINQ6ZT62 677 aa14.78□□□□□ -0.04
TTC28-207ENST00000490475 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
TTC28-207ENST00000490475 THRAP3Q9Y2W1 955 aaKnown RBP14.78□□□□□ -0.04
TTC28-207ENST00000490475 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
TTC28-207ENST00000490475 GCP02774 474 aa14.77□□□□□ -0.05
TTC28-207ENST00000490475 CHRNA2Q15822 529 aa14.77□□□□□ -0.05
TTC28-207ENST00000490475 NUTM2GQ5VZR2 741 aa14.77□□□□□ -0.05
TTC28-207ENST00000490475 FAM196AQ6ZSG2 479 aa14.77□□□□□ -0.05
TTC28-207ENST00000490475 DEFB132Q7Z7B7 95 aa14.77□□□□□ -0.05
TTC28-207ENST00000490475 CABP2Q9NPB3 220 aa14.77□□□□□ -0.05
TTC28-207ENST00000490475 STRN4Q9NRL3 753 aa14.77□□□□□ -0.05
TTC28-207ENST00000490475 USP6P35125 1406 aa14.76□□□□□ -0.05
TTC28-207ENST00000490475 SSH2Q76I76 1423 aa14.76□□□□□ -0.05
TTC28-207ENST00000490475 DISP2A7MBM2 1401 aa14.75□□□□□ -0.05
TTC28-207ENST00000490475 TCP11L2Q8N4U5 519 aa14.75□□□□□ -0.05
TTC28-207ENST00000490475 CABP1Q9NZU7 370 aa14.75□□□□□ -0.05
TTC28-207ENST00000490475 NLRP6P59044 892 aa14.74□□□□□ -0.05
TTC28-207ENST00000490475 PDE3BQ13370 1112 aa14.74□□□□□ -0.05
TTC28-207ENST00000490475 SRCAPQ6ZRS2 3230 aa14.74□□□□□ -0.05
TTC28-207ENST00000490475 LMO7Q8WWI1 1683 aa14.74□□□□□ -0.05
TTC28-207ENST00000490475 PARD3Q8TEW0 1356 aa14.73□□□□□ -0.05
TTC28-207ENST00000490475 SBNO2Q9Y2G9 1366 aa14.73□□□□□ -0.05
TTC28-207ENST00000490475 TTC21AQ8NDW8 1320 aa14.72□□□□□ -0.05
TTC28-207ENST00000490475 CAMTA1Q9Y6Y1 1673 aa14.72□□□□□ -0.05
TTC28-207ENST00000490475 KCNH5Q8NCM2 988 aa14.72□□□□□ -0.05
TTC28-207ENST00000490475 AATKQ6ZMQ8 1374 aa14.72□□□□□ -0.05
TTC28-207ENST00000490475 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
TTC28-207ENST00000490475 USP35Q9P2H5 1018 aa14.71□□□□□ -0.05
TTC28-207ENST00000490475 SLIT3O75094 1523 aa14.71□□□□□ -0.06
TTC28-207ENST00000490475 CRB1P82279 1406 aa14.7□□□□□ -0.06
TTC28-207ENST00000490475 LARP1Q6PKG0 1096 aaKnown RBP14.7□□□□□ -0.06
TTC28-207ENST00000490475 COL5A2P05997 1499 aaPredicted RBP14.69□□□□□ -0.06
TTC28-207ENST00000490475 LRP5O75197 1615 aa14.69□□□□□ -0.06
TTC28-207ENST00000490475 TNS1Q9HBL0 1735 aaKnown RBP14.69□□□□□ -0.06
TTC28-207ENST00000490475 AKAP12Q02952 1782 aa14.68□□□□□ -0.06
TTC28-207ENST00000490475 EN1Q05925 392 aaPredicted RBP14.68□□□□□ -0.06
TTC28-207ENST00000490475 CDCA7Q9BWT1 371 aaPredicted RBP14.68□□□□□ -0.06
TTC28-207ENST00000490475 TONSLQ96HA7 1378 aa14.68□□□□□ -0.06
TTC28-207ENST00000490475 PARP4Q9UKK3 1724 aaKnown RBP14.67□□□□□ -0.06
TTC28-207ENST00000490475 TRIM37O94972 964 aa14.67□□□□□ -0.06
TTC28-207ENST00000490475 FAM182BQ5T319 152 aa14.67□□□□□ -0.06
TTC28-207ENST00000490475 CARD11Q9BXL7 1154 aa14.67□□□□□ -0.06
TTC28-207ENST00000490475 PIK3C2AO00443 1686 aa14.67□□□□□ -0.06
TTC28-207ENST00000490475 TTC21BQ7Z4L5 1316 aa14.66□□□□□ -0.06
TTC28-207ENST00000490475 CPSF1Q10570 1443 aaKnown RBP14.66□□□□□ -0.06
TTC28-207ENST00000490475 KTN1Q86UP2 1357 aaKnown RBP14.66□□□□□ -0.06
TTC28-207ENST00000490475 PUS7Q96PZ0 661 aaKnown RBP14.66□□□□□ -0.06
TTC28-207ENST00000490475 ABCC6O95255 1503 aa14.66□□□□□ -0.06
TTC28-207ENST00000490475 APBA3O96018 575 aa14.65□□□□□ -0.06
TTC28-207ENST00000490475 TOM1L2Q6ZVM7 507 aa14.65□□□□□ -0.06
TTC28-207ENST00000490475 WDR17Q8IZU2 1322 aa14.65□□□□□ -0.06
TTC28-207ENST00000490475 ZBTB7CA1YPR0 619 aa14.64□□□□□ -0.07
TTC28-207ENST00000490475 NBPF14Q5TI25 921 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms