RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 ONECUT3O60422 494 aaPredicted RBP25.85■■□□□ 1.73
YIPF3-208ENST00000490447 KRT27Q7Z3Y8 459 aa25.85■■□□□ 1.73
YIPF3-208ENST00000490447 NUDT16Q96DE0 195 aaKnown RBP25.84■■□□□ 1.73
YIPF3-208ENST00000490447 BRWD3Q6RI45 1802 aa25.83■■□□□ 1.73
YIPF3-208ENST00000490447 ATP7BP35670 1465 aa25.83■■□□□ 1.73
YIPF3-208ENST00000490447 ITSN1Q15811 1721 aa25.83■■□□□ 1.72
YIPF3-208ENST00000490447 COL14A1Q05707 1796 aaKnown RBP25.82■■□□□ 1.72
YIPF3-208ENST00000490447 FAM98CQ17RN3 349 aaKnown RBP25.8■■□□□ 1.72
YIPF3-208ENST00000490447 CDK19Q9BWU1 502 aa25.8■■□□□ 1.72
YIPF3-208ENST00000490447 PRDM11Q9NQV5 511 aa25.8■■□□□ 1.72
YIPF3-208ENST00000490447 NRAPQ86VF7 1730 aa25.8■■□□□ 1.72
YIPF3-208ENST00000490447 DEFB132Q7Z7B7 95 aa25.77■■□□□ 1.72
YIPF3-208ENST00000490447 KIAA1210Q9ULL0 1709 aa25.75■■□□□ 1.71
YIPF3-208ENST00000490447 CCDC61Q9Y6R9 512 aa25.74■■□□□ 1.71
YIPF3-208ENST00000490447 CRYBG1Q9Y4K1 1723 aa25.73■■□□□ 1.71
YIPF3-208ENST00000490447 SPATA31A5Q5VU36 1347 aa25.73■■□□□ 1.71
YIPF3-208ENST00000490447 SPATA31A7Q8IWB4 1347 aa25.73■■□□□ 1.71
YIPF3-208ENST00000490447 ACEP12821 1306 aa25.72■■□□□ 1.71
YIPF3-208ENST00000490447 POLR3AO14802 1390 aaPredicted RBP25.72■■□□□ 1.71
YIPF3-208ENST00000490447 KIAA0232Q92628 1395 aa25.72■■□□□ 1.71
YIPF3-208ENST00000490447 BAG6P46379 1132 aa25.71■■□□□ 1.71
YIPF3-208ENST00000490447 NBPF1Q3BBV0 1214 aa25.7■■□□□ 1.71
YIPF3-208ENST00000490447 NUTM2GQ5VZR2 741 aa25.7■■□□□ 1.71
YIPF3-208ENST00000490447 SRPK2P78362 688 aaKnown RBP25.69■■□□□ 1.7
YIPF3-208ENST00000490447 NBPF8Q3BBV2 869 aa25.69■■□□□ 1.7
YIPF3-208ENST00000490447 TOPAZ1Q8N9V7 1692 aa25.69■■□□□ 1.7
YIPF3-208ENST00000490447 ZC3H6P61129 1189 aaKnown RBP25.68■■□□□ 1.7
YIPF3-208ENST00000490447 CHRNA2Q15822 529 aa25.68■■□□□ 1.7
YIPF3-208ENST00000490447 PHRF1Q9P1Y6 1649 aaKnown RBP25.68■■□□□ 1.7
YIPF3-208ENST00000490447 PLEKHG3A1L390 1219 aa25.67■■□□□ 1.7
YIPF3-208ENST00000490447 STRN4Q9NRL3 753 aa25.67■■□□□ 1.7
YIPF3-208ENST00000490447 CENPJQ9HC77 1338 aaPredicted RBP25.67■■□□□ 1.7
YIPF3-208ENST00000490447 ABTB2Q8N961 1025 aa25.66■■□□□ 1.7
YIPF3-208ENST00000490447 PPIP5K1Q6PFW1 1433 aa25.64■■□□□ 1.7
YIPF3-208ENST00000490447 SPATA31A1Q5TZJ5 1347 aa25.64■■□□□ 1.7
YIPF3-208ENST00000490447 FAM182BQ5T319 152 aa25.63■■□□□ 1.69
YIPF3-208ENST00000490447 THSD7AQ9UPZ6 1657 aa25.63■■□□□ 1.69
YIPF3-208ENST00000490447 EVA1CP58658 441 aa25.63■■□□□ 1.69
YIPF3-208ENST00000490447 CABP2Q9NPB3 220 aa25.62■■□□□ 1.69
YIPF3-208ENST00000490447 USP35Q9P2H5 1018 aa25.61■■□□□ 1.69
YIPF3-208ENST00000490447 NRKQ7Z2Y5 1582 aa25.6■■□□□ 1.69
YIPF3-208ENST00000490447 NLRP13Q86W25 1043 aa25.6■■□□□ 1.69
YIPF3-208ENST00000490447 RGPD1P0DJD0 1748 aa25.59■■□□□ 1.69
YIPF3-208ENST00000490447 EN1Q05925 392 aaPredicted RBP25.58■■□□□ 1.69
YIPF3-208ENST00000490447 USP19O94966 1318 aa25.57■■□□□ 1.68
YIPF3-208ENST00000490447 SSH2Q76I76 1423 aa25.57■■□□□ 1.68
YIPF3-208ENST00000490447 CPDO75976 1380 aa25.56■■□□□ 1.68
YIPF3-208ENST00000490447 QRICH2Q9H0J4 1663 aa25.56■■□□□ 1.68
YIPF3-208ENST00000490447 L3MBTL2Q969R5 705 aa25.56■■□□□ 1.68
YIPF3-208ENST00000490447 BRD4O60885 1362 aaPredicted RBP25.55■■□□□ 1.68
YIPF3-208ENST00000490447 FAM196AQ6ZSG2 479 aa25.55■■□□□ 1.68
YIPF3-208ENST00000490447 PSDA5PKW4 1024 aaPredicted RBP25.54■■□□□ 1.68
YIPF3-208ENST00000490447 GCP02774 474 aa25.54■■□□□ 1.68
YIPF3-208ENST00000490447 PDE3BQ13370 1112 aa25.53■■□□□ 1.68
YIPF3-208ENST00000490447 LARP1Q6PKG0 1096 aaKnown RBP25.53■■□□□ 1.68
YIPF3-208ENST00000490447 BARGINQ6ZT62 677 aa25.53■■□□□ 1.68
YIPF3-208ENST00000490447 CABP1Q9NZU7 370 aa25.53■■□□□ 1.68
YIPF3-208ENST00000490447 DISP2A7MBM2 1401 aa25.52■■□□□ 1.68
YIPF3-208ENST00000490447 CAMTA1Q9Y6Y1 1673 aa25.52■■□□□ 1.68
YIPF3-208ENST00000490447 EVC2Q86UK5 1308 aa25.51■■□□□ 1.67
YIPF3-208ENST00000490447 TCP11L2Q8N4U5 519 aa25.51■■□□□ 1.67
YIPF3-208ENST00000490447 USP6P35125 1406 aa25.5■■□□□ 1.67
YIPF3-208ENST00000490447 ZBTB7CA1YPR0 619 aa25.5■■□□□ 1.67
YIPF3-208ENST00000490447 TRIM37O94972 964 aa25.5■■□□□ 1.67
YIPF3-208ENST00000490447 ROCK2O75116 1388 aaKnown RBP25.49■■□□□ 1.67
YIPF3-208ENST00000490447 NLRP6P59044 892 aa25.49■■□□□ 1.67
YIPF3-208ENST00000490447 NEUROD1Q13562 356 aa25.49■■□□□ 1.67
YIPF3-208ENST00000490447 SIN3AQ96ST3 1273 aa25.49■■□□□ 1.67
YIPF3-208ENST00000490447 LMO7Q8WWI1 1683 aa25.49■■□□□ 1.67
YIPF3-208ENST00000490447 TNS1Q9HBL0 1735 aaKnown RBP25.48■■□□□ 1.67
YIPF3-208ENST00000490447 THRAP3Q9Y2W1 955 aaKnown RBP25.48■■□□□ 1.67
YIPF3-208ENST00000490447 LRP5O75197 1615 aa25.47■■□□□ 1.67
YIPF3-208ENST00000490447 EZH2Q15910 746 aaKnown RBP25.47■■□□□ 1.67
YIPF3-208ENST00000490447 APBA3O96018 575 aa25.46■■□□□ 1.67
YIPF3-208ENST00000490447 COL5A2P05997 1499 aaPredicted RBP25.46■■□□□ 1.67
YIPF3-208ENST00000490447 TRPM1Q7Z4N2 1603 aa25.46■■□□□ 1.67
YIPF3-208ENST00000490447 R3HDM1Q15032 1099 aaKnown RBP25.44■■□□□ 1.66
YIPF3-208ENST00000490447 PARD3Q8TEW0 1356 aa25.43■■□□□ 1.66
YIPF3-208ENST00000490447 CRB1P82279 1406 aa25.42■■□□□ 1.66
YIPF3-208ENST00000490447 CAMKK2Q96RR4 588 aa25.42■■□□□ 1.66
YIPF3-208ENST00000490447 SLIT3O75094 1523 aa25.41■■□□□ 1.66
YIPF3-208ENST00000490447 ZNF692Q9BU19 519 aaPredicted RBP25.4■■□□□ 1.66
YIPF3-208ENST00000490447 AATKQ6ZMQ8 1374 aa25.4■■□□□ 1.66
YIPF3-208ENST00000490447 C11orf95C9JLR9 678 aaPredicted RBP25.38■■□□□ 1.65
YIPF3-208ENST00000490447 TOM1L2Q6ZVM7 507 aa25.38■■□□□ 1.65
YIPF3-208ENST00000490447 PIK3C2AO00443 1686 aa25.38■■□□□ 1.65
YIPF3-208ENST00000490447 KCNH5Q8NCM2 988 aa25.37■■□□□ 1.65
YIPF3-208ENST00000490447 PARP4Q9UKK3 1724 aaKnown RBP25.36■■□□□ 1.65
YIPF3-208ENST00000490447 TTC21BQ7Z4L5 1316 aa25.36■■□□□ 1.65
YIPF3-208ENST00000490447 TTC21AQ8NDW8 1320 aa25.34■■□□□ 1.65
YIPF3-208ENST00000490447 OVOS2A0A0G2JMS6 1433 aa25.34■■□□□ 1.65
YIPF3-208ENST00000490447 OVOS2A0A0J9YW53 1432 aa25.34■■□□□ 1.65
YIPF3-208ENST00000490447 CPSF1Q10570 1443 aaKnown RBP25.34■■□□□ 1.65
YIPF3-208ENST00000490447 OVOS2Q6IE36 1432 aa25.34■■□□□ 1.65
YIPF3-208ENST00000490447 SOX12O15370 315 aa25.34■■□□□ 1.65
YIPF3-208ENST00000490447 DDB1Q16531 1140 aa25.33■■□□□ 1.64
YIPF3-208ENST00000490447 NBPF14Q5TI25 921 aa25.33■■□□□ 1.64
YIPF3-208ENST00000490447 KTN1Q86UP2 1357 aaKnown RBP25.32■■□□□ 1.64
YIPF3-208ENST00000490447 WDR17Q8IZU2 1322 aa25.32■■□□□ 1.64
YIPF3-208ENST00000490447 CSB-PGBD3P0DP91 1061 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms