RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 BCL9LQ86UU0 1499 aa23.96■■□□□ 1.43
RAPGEF3-212ENST00000490387 NGDNQ8NEJ9 315 aaKnown RBP23.95■■□□□ 1.42
RAPGEF3-212ENST00000490387 CABLES1Q8TDN4 633 aa23.95■■□□□ 1.42
RAPGEF3-212ENST00000490387 UPF1Q92900 1129 aaKnown RBP eCLIP23.95■■□□□ 1.42
RAPGEF3-212ENST00000490387 ALS2Q96Q42 1657 aa23.94■■□□□ 1.42
RAPGEF3-212ENST00000490387 NUDT16Q96DE0 195 aaKnown RBP23.93■■□□□ 1.42
RAPGEF3-212ENST00000490387 CDK19Q9BWU1 502 aa23.93■■□□□ 1.42
RAPGEF3-212ENST00000490387 SLIT2O94813 1529 aa23.93■■□□□ 1.42
RAPGEF3-212ENST00000490387 EVC2Q86UK5 1308 aa23.92■■□□□ 1.42
RAPGEF3-212ENST00000490387 TOPAZ1Q8N9V7 1692 aa23.92■■□□□ 1.42
RAPGEF3-212ENST00000490387 SLC24A1O60721 1099 aa23.91■■□□□ 1.42
RAPGEF3-212ENST00000490387 PLCH1Q4KWH8 1693 aa23.91■■□□□ 1.42
RAPGEF3-212ENST00000490387 UNC5CLQ8IV45 518 aa23.9■■□□□ 1.42
RAPGEF3-212ENST00000490387 PAK3O75914 559 aaPredicted RBP23.89■■□□□ 1.41
RAPGEF3-212ENST00000490387 NWD2Q9ULI1 1742 aa23.89■■□□□ 1.41
RAPGEF3-212ENST00000490387 GJD4Q96KN9 370 aaPredicted RBP23.88■■□□□ 1.41
RAPGEF3-212ENST00000490387 TMF1P82094 1093 aa23.86■■□□□ 1.41
RAPGEF3-212ENST00000490387 PUS7Q96PZ0 661 aaKnown RBP23.86■■□□□ 1.41
RAPGEF3-212ENST00000490387 CABP2Q9NPB3 220 aa23.86■■□□□ 1.41
RAPGEF3-212ENST00000490387 CCDC61Q9Y6R9 512 aa23.85■■□□□ 1.41
RAPGEF3-212ENST00000490387 GLI3P10071 1580 aa23.84■■□□□ 1.41
RAPGEF3-212ENST00000490387 ATAD2Q6PL18 1390 aa23.84■■□□□ 1.41
RAPGEF3-212ENST00000490387 SRPK2P78362 688 aaKnown RBP23.84■■□□□ 1.41
RAPGEF3-212ENST00000490387 CRYBG1Q9Y4K1 1723 aa23.84■■□□□ 1.41
RAPGEF3-212ENST00000490387 POLR3AO14802 1390 aaPredicted RBP23.82■■□□□ 1.4
RAPGEF3-212ENST00000490387 ACEP12821 1306 aa23.82■■□□□ 1.4
RAPGEF3-212ENST00000490387 FAM83GA6ND36 823 aa23.81■■□□□ 1.4
RAPGEF3-212ENST00000490387 C11orf95C9JLR9 678 aaPredicted RBP23.81■■□□□ 1.4
RAPGEF3-212ENST00000490387 COL14A1Q05707 1796 aaKnown RBP23.8■■□□□ 1.4
RAPGEF3-212ENST00000490387 MYOM1P52179 1685 aa23.8■■□□□ 1.4
RAPGEF3-212ENST00000490387 PPIP5K1Q6PFW1 1433 aa23.79■■□□□ 1.4
RAPGEF3-212ENST00000490387 PLEKHG3A1L390 1219 aa23.79■■□□□ 1.4
RAPGEF3-212ENST00000490387 VPS72Q15906 364 aa23.79■■□□□ 1.4
RAPGEF3-212ENST00000490387 CCDC9Q9Y3X0 531 aaKnown RBP23.79■■□□□ 1.4
RAPGEF3-212ENST00000490387 NRAPQ86VF7 1730 aa23.79■■□□□ 1.4
RAPGEF3-212ENST00000490387 PHRF1Q9P1Y6 1649 aaKnown RBP23.78■■□□□ 1.4
RAPGEF3-212ENST00000490387 CDCA8Q53HL2 280 aa23.78■■□□□ 1.4
RAPGEF3-212ENST00000490387 BRWD3Q6RI45 1802 aa23.75■■□□□ 1.39
RAPGEF3-212ENST00000490387 BTG4Q9NY30 223 aa23.75■■□□□ 1.39
RAPGEF3-212ENST00000490387 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
RAPGEF3-212ENST00000490387 NINLQ9Y2I6 1382 aa23.75■■□□□ 1.39
RAPGEF3-212ENST00000490387 AKAP12Q02952 1782 aa23.74■■□□□ 1.39
RAPGEF3-212ENST00000490387 NUTM2GQ5VZR2 741 aa23.74■■□□□ 1.39
RAPGEF3-212ENST00000490387 PRDM11Q9NQV5 511 aa23.74■■□□□ 1.39
RAPGEF3-212ENST00000490387 CD163L1Q9NR16 1453 aa23.74■■□□□ 1.39
RAPGEF3-212ENST00000490387 CABP1Q9NZU7 370 aa23.73■■□□□ 1.39
RAPGEF3-212ENST00000490387 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
RAPGEF3-212ENST00000490387 CPSF1Q10570 1443 aaKnown RBP23.71■■□□□ 1.39
RAPGEF3-212ENST00000490387 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
RAPGEF3-212ENST00000490387 ABTB2Q8N961 1025 aa23.71■■□□□ 1.39
RAPGEF3-212ENST00000490387 KIAA0232Q92628 1395 aa23.7■■□□□ 1.38
RAPGEF3-212ENST00000490387 SEPT12Q8IYM1 358 aa23.7■■□□□ 1.38
RAPGEF3-212ENST00000490387 SLC12A5Q9H2X9 1139 aa23.69■■□□□ 1.38
RAPGEF3-212ENST00000490387 MON2Q7Z3U7 1717 aa23.69■■□□□ 1.38
RAPGEF3-212ENST00000490387 EP400Q96L91 3159 aa23.68■■□□□ 1.38
RAPGEF3-212ENST00000490387 A0A0G2JS52 829 aa23.68■■□□□ 1.38
RAPGEF3-212ENST00000490387 MYT1Q01538 1121 aa23.68■■□□□ 1.38
RAPGEF3-212ENST00000490387 NRKQ7Z2Y5 1582 aa23.68■■□□□ 1.38
RAPGEF3-212ENST00000490387 BRD4O60885 1362 aaPredicted RBP23.67■■□□□ 1.38
RAPGEF3-212ENST00000490387 ZC3H6P61129 1189 aaKnown RBP23.67■■□□□ 1.38
RAPGEF3-212ENST00000490387 ONECUT3O60422 494 aaPredicted RBP23.66■■□□□ 1.38
RAPGEF3-212ENST00000490387 CHRNA2Q15822 529 aa23.66■■□□□ 1.38
RAPGEF3-212ENST00000490387 USP6P35125 1406 aa23.66■■□□□ 1.38
RAPGEF3-212ENST00000490387 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
RAPGEF3-212ENST00000490387 TMC1Q8TDI8 760 aa23.65■■□□□ 1.38
RAPGEF3-212ENST00000490387 ANKRD36BQ8N2N9 1353 aa23.65■■□□□ 1.38
RAPGEF3-212ENST00000490387 FAM98CQ17RN3 349 aaKnown RBP23.64■■□□□ 1.37
RAPGEF3-212ENST00000490387 NLRP13Q86W25 1043 aa23.64■■□□□ 1.37
RAPGEF3-212ENST00000490387 CCDC125Q86Z20 511 aa23.64■■□□□ 1.37
RAPGEF3-212ENST00000490387 SSH2Q76I76 1423 aa23.64■■□□□ 1.37
RAPGEF3-212ENST00000490387 USP19O94966 1318 aa23.63■■□□□ 1.37
RAPGEF3-212ENST00000490387 SPATA31A5Q5VU36 1347 aa23.62■■□□□ 1.37
RAPGEF3-212ENST00000490387 SPATA31A7Q8IWB4 1347 aa23.62■■□□□ 1.37
RAPGEF3-212ENST00000490387 KRT27Q7Z3Y8 459 aa23.62■■□□□ 1.37
RAPGEF3-212ENST00000490387 POLR3GLQ9BT43 218 aa23.61■■□□□ 1.37
RAPGEF3-212ENST00000490387 STRN4Q9NRL3 753 aa23.61■■□□□ 1.37
RAPGEF3-212ENST00000490387 TERF2IPQ9NYB0 399 aa23.61■■□□□ 1.37
RAPGEF3-212ENST00000490387 ZNF692Q9BU19 519 aaPredicted RBP23.6■■□□□ 1.37
RAPGEF3-212ENST00000490387 CPDO75976 1380 aa23.6■■□□□ 1.37
RAPGEF3-212ENST00000490387 BLMP54132 1417 aaPredicted RBP23.59■■□□□ 1.37
RAPGEF3-212ENST00000490387 GCP02774 474 aa23.59■■□□□ 1.37
RAPGEF3-212ENST00000490387 KTN1Q86UP2 1357 aaKnown RBP23.59■■□□□ 1.37
RAPGEF3-212ENST00000490387 PIK3C2AO00443 1686 aa23.58■■□□□ 1.37
RAPGEF3-212ENST00000490387 NLRP6P59044 892 aa23.58■■□□□ 1.37
RAPGEF3-212ENST00000490387 HDGFL2Q7Z4V5 671 aaPredicted RBP23.58■■□□□ 1.37
RAPGEF3-212ENST00000490387 EDC4Q6P2E9 1401 aaKnown RBP23.58■■□□□ 1.36
RAPGEF3-212ENST00000490387 LMO7Q8WWI1 1683 aa23.57■■□□□ 1.36
RAPGEF3-212ENST00000490387 EVA1CP58658 441 aa23.57■■□□□ 1.36
RAPGEF3-212ENST00000490387 THSD7AQ9UPZ6 1657 aa23.57■■□□□ 1.36
RAPGEF3-212ENST00000490387 SPATA31A1Q5TZJ5 1347 aa23.57■■□□□ 1.36
RAPGEF3-212ENST00000490387 ZNF316A6NFI3 1004 aaPredicted RBP23.56■■□□□ 1.36
RAPGEF3-212ENST00000490387 CAMTA1Q9Y6Y1 1673 aa23.56■■□□□ 1.36
RAPGEF3-212ENST00000490387 SLIT3O75094 1523 aa23.55■■□□□ 1.36
RAPGEF3-212ENST00000490387 SF3B2Q13435 895 aaKnown RBP23.55■■□□□ 1.36
RAPGEF3-212ENST00000490387 CARD14Q9BXL6 1004 aa23.55■■□□□ 1.36
RAPGEF3-212ENST00000490387 ZBTB7CA1YPR0 619 aa23.53■■□□□ 1.36
RAPGEF3-212ENST00000490387 PANK3Q9H999 370 aa23.53■■□□□ 1.36
RAPGEF3-212ENST00000490387 TTC21BQ7Z4L5 1316 aa23.53■■□□□ 1.36
RAPGEF3-212ENST00000490387 USP54Q70EL1 1684 aa23.52■■□□□ 1.36
RAPGEF3-212ENST00000490387 USP35Q9P2H5 1018 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms