RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
ECM1-205ENST00000490346 USP6P35125 1406 aa12.85□□□□□ -0.35
ECM1-205ENST00000490346 ABCA3Q99758 1704 aa12.84□□□□□ -0.35
ECM1-205ENST00000490346 CPSF1Q10570 1443 aaKnown RBP12.83□□□□□ -0.36
ECM1-205ENST00000490346 HAP1P54257 671 aaPredicted RBP12.83□□□□□ -0.36
ECM1-205ENST00000490346 NUTM2GQ5VZR2 741 aa12.83□□□□□ -0.36
ECM1-205ENST00000490346 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
ECM1-205ENST00000490346 CD163L1Q9NR16 1453 aa12.83□□□□□ -0.36
ECM1-205ENST00000490346 KTN1Q86UP2 1357 aaKnown RBP12.82□□□□□ -0.36
ECM1-205ENST00000490346 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
ECM1-205ENST00000490346 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
ECM1-205ENST00000490346 ABTB2Q8N961 1025 aa12.82□□□□□ -0.36
ECM1-205ENST00000490346 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
ECM1-205ENST00000490346 RGS17Q9UGC6 210 aaPredicted RBP12.82□□□□□ -0.36
ECM1-205ENST00000490346 MON2Q7Z3U7 1717 aa12.82□□□□□ -0.36
ECM1-205ENST00000490346 MARF1Q9Y4F3 1742 aaKnown RBP12.82□□□□□ -0.36
ECM1-205ENST00000490346 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
ECM1-205ENST00000490346 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
ECM1-205ENST00000490346 NRKQ7Z2Y5 1582 aa12.81□□□□□ -0.36
ECM1-205ENST00000490346 HDGFL2Q7Z4V5 671 aaPredicted RBP12.81□□□□□ -0.36
ECM1-205ENST00000490346 CRYBG1Q9Y4K1 1723 aa12.81□□□□□ -0.36
ECM1-205ENST00000490346 A0A1W2PP64 1363 aa12.81□□□□□ -0.36
ECM1-205ENST00000490346 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
ECM1-205ENST00000490346 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
ECM1-205ENST00000490346 TERF2IPQ9NYB0 399 aa12.8□□□□□ -0.36
ECM1-205ENST00000490346 AFF2P51816 1311 aa12.8□□□□□ -0.36
ECM1-205ENST00000490346 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
ECM1-205ENST00000490346 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
ECM1-205ENST00000490346 MYOM1P52179 1685 aa12.8□□□□□ -0.36
ECM1-205ENST00000490346 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
ECM1-205ENST00000490346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.78□□□□□ -0.36
ECM1-205ENST00000490346 ANKRD36BQ8N2N9 1353 aa12.78□□□□□ -0.36
ECM1-205ENST00000490346 NLRP6P59044 892 aa12.77□□□□□ -0.37
ECM1-205ENST00000490346 NLRP13Q86W25 1043 aa12.77□□□□□ -0.37
ECM1-205ENST00000490346 USP19O94966 1318 aa12.77□□□□□ -0.37
ECM1-205ENST00000490346 TTC21AQ8NDW8 1320 aa12.77□□□□□ -0.37
ECM1-205ENST00000490346 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
ECM1-205ENST00000490346 C11orf95C9JLR9 678 aaPredicted RBP12.76□□□□□ -0.37
ECM1-205ENST00000490346 ZNF772Q68DY9 489 aaPredicted RBP12.76□□□□□ -0.37
ECM1-205ENST00000490346 POTEAQ6S8J7 498 aa12.76□□□□□ -0.37
ECM1-205ENST00000490346 ILDR2Q71H61 639 aa12.75□□□□□ -0.37
ECM1-205ENST00000490346 NME9Q86XW9 330 aa12.75□□□□□ -0.37
ECM1-205ENST00000490346 FNBP4Q8N3X1 1017 aaPredicted RBP12.75□□□□□ -0.37
ECM1-205ENST00000490346 ZRANB1Q9UGI0 708 aa12.75□□□□□ -0.37
ECM1-205ENST00000490346 USP21Q9UK80 565 aa12.75□□□□□ -0.37
ECM1-205ENST00000490346 PLCH1Q4KWH8 1693 aa12.74□□□□□ -0.37
ECM1-205ENST00000490346 SLIT3O75094 1523 aa12.74□□□□□ -0.37
ECM1-205ENST00000490346 KIAA0232Q92628 1395 aa12.74□□□□□ -0.37
ECM1-205ENST00000490346 FAM83GA6ND36 823 aa12.74□□□□□ -0.37
ECM1-205ENST00000490346 ZC3H6P61129 1189 aaKnown RBP12.74□□□□□ -0.37
ECM1-205ENST00000490346 SLIT2O94813 1529 aa12.73□□□□□ -0.37
ECM1-205ENST00000490346 BCL9LQ86UU0 1499 aa12.73□□□□□ -0.37
ECM1-205ENST00000490346 GCP02774 474 aa12.73□□□□□ -0.37
ECM1-205ENST00000490346 PRDM11Q9NQV5 511 aa12.73□□□□□ -0.37
ECM1-205ENST00000490346 COL14A1Q05707 1796 aaKnown RBP12.73□□□□□ -0.37
ECM1-205ENST00000490346 USP31Q70CQ4 1352 aa12.72□□□□□ -0.37
ECM1-205ENST00000490346 KIF7Q2M1P5 1343 aa12.72□□□□□ -0.37
ECM1-205ENST00000490346 SOX12O15370 315 aa12.72□□□□□ -0.37
ECM1-205ENST00000490346 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
ECM1-205ENST00000490346 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
ECM1-205ENST00000490346 USP54Q70EL1 1684 aa12.72□□□□□ -0.37
ECM1-205ENST00000490346 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.37
ECM1-205ENST00000490346 UNC5CLQ8IV45 518 aa12.71□□□□□ -0.37
ECM1-205ENST00000490346 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.37
ECM1-205ENST00000490346 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.38
ECM1-205ENST00000490346 ATRNO75882 1429 aa12.71□□□□□ -0.38
ECM1-205ENST00000490346 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.38
ECM1-205ENST00000490346 CPDO75976 1380 aa12.7□□□□□ -0.38
ECM1-205ENST00000490346 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
ECM1-205ENST00000490346 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
ECM1-205ENST00000490346 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
ECM1-205ENST00000490346 NRAPQ86VF7 1730 aa12.7□□□□□ -0.38
ECM1-205ENST00000490346 OVOS2A0A0J9YW53 1432 aa12.7□□□□□ -0.38
ECM1-205ENST00000490346 OVOS2Q6IE36 1432 aa12.7□□□□□ -0.38
ECM1-205ENST00000490346 NFAT5O94916 1531 aa12.69□□□□□ -0.38
ECM1-205ENST00000490346 KCNH5Q8NCM2 988 aa12.69□□□□□ -0.38
ECM1-205ENST00000490346 PANK3Q9H999 370 aa12.69□□□□□ -0.38
ECM1-205ENST00000490346 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
ECM1-205ENST00000490346 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
ECM1-205ENST00000490346 FYB1O15117 783 aa12.68□□□□□ -0.38
ECM1-205ENST00000490346 RXRBP28702 533 aa12.68□□□□□ -0.38
ECM1-205ENST00000490346 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
ECM1-205ENST00000490346 COG3Q96JB2 828 aa12.68□□□□□ -0.38
ECM1-205ENST00000490346 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
ECM1-205ENST00000490346 RBM6P78332 1123 aaKnown RBP12.67□□□□□ -0.38
ECM1-205ENST00000490346 GGNBP2Q9H3C7 697 aa12.67□□□□□ -0.38
ECM1-205ENST00000490346 CAMTA1Q9Y6Y1 1673 aa12.67□□□□□ -0.38
ECM1-205ENST00000490346 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
ECM1-205ENST00000490346 ARHGEF25Q86VW2 580 aa12.66□□□□□ -0.38
ECM1-205ENST00000490346 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
ECM1-205ENST00000490346 VPS72Q15906 364 aa12.65□□□□□ -0.38
ECM1-205ENST00000490346 GJD4Q96KN9 370 aaPredicted RBP12.65□□□□□ -0.38
ECM1-205ENST00000490346 STRN4Q9NRL3 753 aa12.65□□□□□ -0.38
ECM1-205ENST00000490346 LTN1O94822 1766 aa12.65□□□□□ -0.38
ECM1-205ENST00000490346 COL18A1P39060 1754 aa12.65□□□□□ -0.38
ECM1-205ENST00000490346 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.38
ECM1-205ENST00000490346 GLI3P10071 1580 aa12.64□□□□□ -0.39
ECM1-205ENST00000490346 CGNL1Q0VF96 1302 aa12.64□□□□□ -0.39
ECM1-205ENST00000490346 FBLN1P23142 703 aa12.64□□□□□ -0.39
ECM1-205ENST00000490346 EVA1CP58658 441 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms