RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 KCNH2Q12809 1159 aa7.78□□□□□ -1.16
CD46-216ENST00000490278 ZNF330Q9Y3S2 320 aaPredicted RBP7.78□□□□□ -1.16
CD46-216ENST00000490278 GPR37L1O60883 481 aa7.77□□□□□ -1.17
CD46-216ENST00000490278 IRF5Q13568 498 aa7.77□□□□□ -1.17
CD46-216ENST00000490278 CCDC24Q8N4L8 307 aa7.77□□□□□ -1.17
CD46-216ENST00000490278 LAPTM4AQ15012 233 aa7.76□□□□□ -1.17
CD46-216ENST00000490278 WASHC4Q2M389 1173 aa7.76□□□□□ -1.17
CD46-216ENST00000490278 FKBPLQ9UIM3 349 aa7.76□□□□□ -1.17
CD46-216ENST00000490278 ZNF777Q9ULD5 760 aaPredicted RBP7.76□□□□□ -1.17
CD46-216ENST00000490278 ARID3CA6NKF2 412 aa7.75□□□□□ -1.17
CD46-216ENST00000490278 GGCXP38435 758 aa7.75□□□□□ -1.17
CD46-216ENST00000490278 TRAF7Q6Q0C0 670 aa7.75□□□□□ -1.17
CD46-216ENST00000490278 ARMC2Q8NEN0 867 aa7.75□□□□□ -1.17
CD46-216ENST00000490278 FCF1Q9Y324 198 aaKnown RBP7.75□□□□□ -1.17
CD46-216ENST00000490278 ZC3H4Q9UPT8 1303 aaKnown RBP7.75□□□□□ -1.17
CD46-216ENST00000490278 PTCRAQ6ISU1 281 aaPredicted RBP7.73□□□□□ -1.17
CD46-216ENST00000490278 UNC93B1Q9H1C4 597 aa7.73□□□□□ -1.17
CD46-216ENST00000490278 C1orf115Q9H7X2 142 aa7.73□□□□□ -1.17
CD46-216ENST00000490278 RNF223E7ERA6 249 aa7.72□□□□□ -1.17
CD46-216ENST00000490278 PPEF1O14829 653 aaPredicted RBP7.72□□□□□ -1.17
CD46-216ENST00000490278 VAC14Q08AM6 782 aa7.72□□□□□ -1.17
CD46-216ENST00000490278 NBPF14Q5TI25 921 aa7.72□□□□□ -1.17
CD46-216ENST00000490278 GPKOWQ92917 476 aaPredicted RBP eCLIP7.72□□□□□ -1.17
CD46-216ENST00000490278 POM121CA8CG34 1229 aa7.71□□□□□ -1.18
CD46-216ENST00000490278 GFRA3O60609 400 aa7.71□□□□□ -1.18
CD46-216ENST00000490278 ANKLE1Q8NAG6 615 aa7.71□□□□□ -1.18
CD46-216ENST00000490278 ZBBXA8MT70 800 aa7.7□□□□□ -1.18
CD46-216ENST00000490278 PPP1R18Q6NYC8 613 aa7.7□□□□□ -1.18
CD46-216ENST00000490278 PDXDC2PQ6P474 469 aa7.7□□□□□ -1.18
CD46-216ENST00000490278 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.7□□□□□ -1.18
CD46-216ENST00000490278 FBXO45P0C2W1 286 aa7.69□□□□□ -1.18
CD46-216ENST00000490278 PTK2Q05397 1052 aa7.69□□□□□ -1.18
CD46-216ENST00000490278 NR1H3Q13133 447 aa7.69□□□□□ -1.18
CD46-216ENST00000490278 GPSM3Q9Y4H4 160 aa7.69□□□□□ -1.18
CD46-216ENST00000490278 ZBTB24O43167 697 aaPredicted RBP7.68□□□□□ -1.18
CD46-216ENST00000490278 BAP1Q92560 729 aa7.68□□□□□ -1.18
CD46-216ENST00000490278 GLMNQ92990 594 aa7.68□□□□□ -1.18
CD46-216ENST00000490278 CALR3Q96L12 384 aaKnown RBP7.68□□□□□ -1.18
CD46-216ENST00000490278 SOX11P35716 441 aa7.67□□□□□ -1.18
CD46-216ENST00000490278 EIF4G2P78344 907 aaKnown RBP eCLIP7.67□□□□□ -1.18
CD46-216ENST00000490278 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
CD46-216ENST00000490278 HDGFL1Q5TGJ6 251 aa7.66□□□□□ -1.18
CD46-216ENST00000490278 CCDC82Q8N4S0 544 aa7.66□□□□□ -1.18
CD46-216ENST00000490278 ZNF511Q8NB15 262 aa7.66□□□□□ -1.18
CD46-216ENST00000490278 ARHGAP9Q9BRR9 750 aa7.66□□□□□ -1.18
CD46-216ENST00000490278 SEMA3FQ13275 785 aa7.65□□□□□ -1.18
CD46-216ENST00000490278 LINC01559Q495D7 138 aa7.65□□□□□ -1.18
CD46-216ENST00000490278 SH3BP5LQ7L8J4 393 aa7.65□□□□□ -1.18
CD46-216ENST00000490278 ADAMTS19Q8TE59 1207 aa7.65□□□□□ -1.18
CD46-216ENST00000490278 CCDC97Q96F63 343 aaPredicted RBP7.65□□□□□ -1.18
CD46-216ENST00000490278 ARID3AQ99856 593 aa7.65□□□□□ -1.18
CD46-216ENST00000490278 OCSTAMPQ9BR26 566 aa7.65□□□□□ -1.18
CD46-216ENST00000490278 ALG2Q9H553 416 aa7.65□□□□□ -1.18
CD46-216ENST00000490278 SERPINA10Q9UK55 444 aa7.65□□□□□ -1.18
CD46-216ENST00000490278 RPIAP49247 311 aa7.64□□□□□ -1.19
CD46-216ENST00000490278 TRIM32Q13049 653 aa7.64□□□□□ -1.19
CD46-216ENST00000490278 AGERQ15109 404 aa7.64□□□□□ -1.19
CD46-216ENST00000490278 SH3RF1Q7Z6J0 888 aa7.64□□□□□ -1.19
CD46-216ENST00000490278 BPHLQ86WA6 291 aaPredicted RBP7.64□□□□□ -1.19
CD46-216ENST00000490278 NRG2O14511 850 aaPredicted RBP7.63□□□□□ -1.19
CD46-216ENST00000490278 SH3BP2P78314 561 aa7.63□□□□□ -1.19
CD46-216ENST00000490278 ZBTB33Q86T24 672 aa7.63□□□□□ -1.19
CD46-216ENST00000490278 ADAM32Q8TC27 787 aa7.63□□□□□ -1.19
CD46-216ENST00000490278 ZNF592Q92610 1267 aa7.63□□□□□ -1.19
CD46-216ENST00000490278 FOXJ1Q92949 421 aa7.63□□□□□ -1.19
CD46-216ENST00000490278 MAGEB6P1A0A0J9YX57 407 aa7.62□□□□□ -1.19
CD46-216ENST00000490278 MCCD1P59942 119 aaPredicted RBP7.62□□□□□ -1.19
CD46-216ENST00000490278 CD2BP2O95400 341 aaKnown RBP7.61□□□□□ -1.19
CD46-216ENST00000490278 WNT7BP56706 349 aa7.61□□□□□ -1.19
CD46-216ENST00000490278 CARD14Q9BXL6 1004 aa7.61□□□□□ -1.19
CD46-216ENST00000490278 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
CD46-216ENST00000490278 ZNF787Q6DD87 383 aa7.6□□□□□ -1.19
CD46-216ENST00000490278 LIAT1Q6ZQX7 453 aa7.6□□□□□ -1.19
CD46-216ENST00000490278 PRKD2Q9BZL6 878 aa7.6□□□□□ -1.19
CD46-216ENST00000490278 PCDHB9Q9Y5E1 797 aa7.6□□□□□ -1.19
CD46-216ENST00000490278 SKOR1P84550 965 aa7.59□□□□□ -1.19
CD46-216ENST00000490278 ERFEQ4G0M1 354 aa7.59□□□□□ -1.19
CD46-216ENST00000490278 DZIP3Q86Y13 1208 aaKnown RBP7.59□□□□□ -1.19
CD46-216ENST00000490278 SLC19A1P41440 591 aa7.58□□□□□ -1.2
CD46-216ENST00000490278 EMID1Q96A84 441 aaPredicted RBP7.58□□□□□ -1.2
CD46-216ENST00000490278 C1QTNF2Q9BXJ5 285 aa7.58□□□□□ -1.2
CD46-216ENST00000490278 VARSP26640 1264 aaKnown RBP7.57□□□□□ -1.2
CD46-216ENST00000490278 SLC10A4Q96EP9 437 aa7.57□□□□□ -1.2
CD46-216ENST00000490278 UCN2Q96RP3 112 aa7.57□□□□□ -1.2
CD46-216ENST00000490278 PPP1R12CQ9BZL4 782 aa7.57□□□□□ -1.2
CD46-216ENST00000490278 CEP126Q9P2H0 1117 aa7.57□□□□□ -1.2
CD46-216ENST00000490278 TRMT44Q8IYL2 757 aaKnown RBP7.56□□□□□ -1.2
CD46-216ENST00000490278 EHBP1Q8NDI1 1231 aa7.56□□□□□ -1.2
CD46-216ENST00000490278 FAM174AQ8TBP5 190 aa7.56□□□□□ -1.2
CD46-216ENST00000490278 ZNF775Q96BV0 537 aaPredicted RBP7.56□□□□□ -1.2
CD46-216ENST00000490278 V9GY48 417 aaPredicted RBP7.56□□□□□ -1.2
CD46-216ENST00000490278 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
CD46-216ENST00000490278 SLFNL1Q499Z3 407 aa7.55□□□□□ -1.2
CD46-216ENST00000490278 RC3H1Q5TC82 1133 aaKnown RBP7.55□□□□□ -1.2
CD46-216ENST00000490278 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
CD46-216ENST00000490278 ARXQ96QS3 562 aa7.55□□□□□ -1.2
CD46-216ENST00000490278 CDV3Q9UKY7 258 aaKnown RBP7.55□□□□□ -1.2
CD46-216ENST00000490278 NBPF20Q3BBV1 942 aa7.54□□□□□ -1.2
CD46-216ENST00000490278 TBC1D9Q6ZT07 1266 aa7.54□□□□□ -1.2
CD46-216ENST00000490278 NFATC2IPQ8NCF5 419 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms