RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
SREBF2-207ENST00000490262 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
SREBF2-207ENST00000490262 CRYBG1Q9Y4K1 1723 aa17.1■□□□□ 0.33
SREBF2-207ENST00000490262 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
SREBF2-207ENST00000490262 NRAPQ86VF7 1730 aa17.09■□□□□ 0.33
SREBF2-207ENST00000490262 COL14A1Q05707 1796 aaKnown RBP17.09■□□□□ 0.33
SREBF2-207ENST00000490262 TOPAZ1Q8N9V7 1692 aa17.07■□□□□ 0.32
SREBF2-207ENST00000490262 POLR3AO14802 1390 aaPredicted RBP17.07■□□□□ 0.32
SREBF2-207ENST00000490262 ACEP12821 1306 aa17.07■□□□□ 0.32
SREBF2-207ENST00000490262 L3MBTL2Q969R5 705 aa17.07■□□□□ 0.32
SREBF2-207ENST00000490262 CENPJQ9HC77 1338 aaPredicted RBP17.06■□□□□ 0.32
SREBF2-207ENST00000490262 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
SREBF2-207ENST00000490262 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
SREBF2-207ENST00000490262 KRT27Q7Z3Y8 459 aa17.05■□□□□ 0.32
SREBF2-207ENST00000490262 SIN3AQ96ST3 1273 aa17.05■□□□□ 0.32
SREBF2-207ENST00000490262 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
SREBF2-207ENST00000490262 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
SREBF2-207ENST00000490262 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
SREBF2-207ENST00000490262 FAM98CQ17RN3 349 aaKnown RBP17.04■□□□□ 0.32
SREBF2-207ENST00000490262 ZRANB1Q9UGI0 708 aa17.04■□□□□ 0.32
SREBF2-207ENST00000490262 A0A0G2JS52 829 aa17.03■□□□□ 0.32
SREBF2-207ENST00000490262 MYT1Q01538 1121 aa17.03■□□□□ 0.32
SREBF2-207ENST00000490262 NUTM2GQ5VZR2 741 aa17.03■□□□□ 0.32
SREBF2-207ENST00000490262 PHRF1Q9P1Y6 1649 aaKnown RBP17.03■□□□□ 0.32
SREBF2-207ENST00000490262 KIAA0232Q92628 1395 aa17.02■□□□□ 0.32
SREBF2-207ENST00000490262 SPATA31A5Q5VU36 1347 aa17.02■□□□□ 0.32
SREBF2-207ENST00000490262 SPATA31A7Q8IWB4 1347 aa17.02■□□□□ 0.32
SREBF2-207ENST00000490262 CABP2Q9NPB3 220 aa17.02■□□□□ 0.32
SREBF2-207ENST00000490262 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
SREBF2-207ENST00000490262 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
SREBF2-207ENST00000490262 ZC3H6P61129 1189 aaKnown RBP17■□□□□ 0.31
SREBF2-207ENST00000490262 SF3B2Q13435 895 aaKnown RBP17■□□□□ 0.31
SREBF2-207ENST00000490262 NEUROD1Q13562 356 aa17■□□□□ 0.31
SREBF2-207ENST00000490262 CHRNA2Q15822 529 aa17■□□□□ 0.31
SREBF2-207ENST00000490262 ABTB2Q8N961 1025 aa17■□□□□ 0.31
SREBF2-207ENST00000490262 SRCAPQ6ZRS2 3230 aa17■□□□□ 0.31
SREBF2-207ENST00000490262 DEFB132Q7Z7B7 95 aa16.99■□□□□ 0.31
SREBF2-207ENST00000490262 TRPM1Q7Z4N2 1603 aa16.99■□□□□ 0.31
SREBF2-207ENST00000490262 STRN4Q9NRL3 753 aa16.97■□□□□ 0.31
SREBF2-207ENST00000490262 CABP1Q9NZU7 370 aa16.97■□□□□ 0.31
SREBF2-207ENST00000490262 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
SREBF2-207ENST00000490262 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
SREBF2-207ENST00000490262 NRKQ7Z2Y5 1582 aa16.96■□□□□ 0.31
SREBF2-207ENST00000490262 THSD7AQ9UPZ6 1657 aa16.96■□□□□ 0.31
SREBF2-207ENST00000490262 USP19O94966 1318 aa16.96■□□□□ 0.3
SREBF2-207ENST00000490262 BRD4O60885 1362 aaPredicted RBP16.95■□□□□ 0.3
SREBF2-207ENST00000490262 ROCK2O75116 1388 aaKnown RBP16.95■□□□□ 0.3
SREBF2-207ENST00000490262 CPDO75976 1380 aa16.94■□□□□ 0.3
SREBF2-207ENST00000490262 EVA1CP58658 441 aa16.94■□□□□ 0.3
SREBF2-207ENST00000490262 FAM182BQ5T319 152 aa16.94■□□□□ 0.3
SREBF2-207ENST00000490262 EVC2Q86UK5 1308 aa16.94■□□□□ 0.3
SREBF2-207ENST00000490262 GCP02774 474 aa16.93■□□□□ 0.3
SREBF2-207ENST00000490262 USP6P35125 1406 aa16.93■□□□□ 0.3
SREBF2-207ENST00000490262 CAMTA1Q9Y6Y1 1673 aa16.92■□□□□ 0.3
SREBF2-207ENST00000490262 BAG6P46379 1132 aa16.92■□□□□ 0.3
SREBF2-207ENST00000490262 SSH2Q76I76 1423 aa16.92■□□□□ 0.3
SREBF2-207ENST00000490262 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
SREBF2-207ENST00000490262 LMO7Q8WWI1 1683 aa16.91■□□□□ 0.3
SREBF2-207ENST00000490262 NLRP6P59044 892 aa16.9■□□□□ 0.3
SREBF2-207ENST00000490262 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
SREBF2-207ENST00000490262 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
SREBF2-207ENST00000490262 BARGINQ6ZT62 677 aa16.89■□□□□ 0.29
SREBF2-207ENST00000490262 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
SREBF2-207ENST00000490262 EN1Q05925 392 aaPredicted RBP16.87■□□□□ 0.29
SREBF2-207ENST00000490262 TCP11L2Q8N4U5 519 aa16.87■□□□□ 0.29
SREBF2-207ENST00000490262 SLIT3O75094 1523 aa16.86■□□□□ 0.29
SREBF2-207ENST00000490262 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
SREBF2-207ENST00000490262 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
SREBF2-207ENST00000490262 FAM196AQ6ZSG2 479 aa16.86■□□□□ 0.29
SREBF2-207ENST00000490262 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
SREBF2-207ENST00000490262 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
SREBF2-207ENST00000490262 PDE3BQ13370 1112 aa16.85■□□□□ 0.29
SREBF2-207ENST00000490262 THRAP3Q9Y2W1 955 aaKnown RBP16.85■□□□□ 0.29
SREBF2-207ENST00000490262 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
SREBF2-207ENST00000490262 AATKQ6ZMQ8 1374 aa16.85■□□□□ 0.29
SREBF2-207ENST00000490262 TNS1Q9HBL0 1735 aaKnown RBP16.84■□□□□ 0.29
SREBF2-207ENST00000490262 TRIM37O94972 964 aa16.84■□□□□ 0.29
SREBF2-207ENST00000490262 CARD11Q9BXL7 1154 aa16.84■□□□□ 0.29
SREBF2-207ENST00000490262 DISP2A7MBM2 1401 aa16.83■□□□□ 0.28
SREBF2-207ENST00000490262 SBNO2Q9Y2G9 1366 aa16.83■□□□□ 0.28
SREBF2-207ENST00000490262 CRB1P82279 1406 aa16.82■□□□□ 0.28
SREBF2-207ENST00000490262 CPSF1Q10570 1443 aaKnown RBP16.82■□□□□ 0.28
SREBF2-207ENST00000490262 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
SREBF2-207ENST00000490262 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
SREBF2-207ENST00000490262 COL18A1P39060 1754 aa16.82■□□□□ 0.28
SREBF2-207ENST00000490262 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
SREBF2-207ENST00000490262 PSDA5PKW4 1024 aaPredicted RBP16.81■□□□□ 0.28
SREBF2-207ENST00000490262 PARP4Q9UKK3 1724 aaKnown RBP16.8■□□□□ 0.28
SREBF2-207ENST00000490262 EZH2Q15910 746 aaKnown RBP16.8■□□□□ 0.28
SREBF2-207ENST00000490262 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
SREBF2-207ENST00000490262 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
SREBF2-207ENST00000490262 APBA3O96018 575 aa16.79■□□□□ 0.28
SREBF2-207ENST00000490262 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
SREBF2-207ENST00000490262 CAMKK2Q96RR4 588 aa16.79■□□□□ 0.28
SREBF2-207ENST00000490262 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
SREBF2-207ENST00000490262 SOX12O15370 315 aa16.78■□□□□ 0.28
SREBF2-207ENST00000490262 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
SREBF2-207ENST00000490262 WDR17Q8IZU2 1322 aa16.77■□□□□ 0.28
SREBF2-207ENST00000490262 RGPD5Q99666 1765 aa16.77■□□□□ 0.27
SREBF2-207ENST00000490262 R3HDM1Q15032 1099 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms