RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 PLEKHG3A1L390 1219 aa10.21□□□□□ -0.77
CPA4-208ENST00000490117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.21□□□□□ -0.77
CPA4-208ENST00000490117 TERF2IPQ9NYB0 399 aa10.21□□□□□ -0.77
CPA4-208ENST00000490117 POLR3AO14802 1390 aaPredicted RBP10.21□□□□□ -0.78
CPA4-208ENST00000490117 EDC4Q6P2E9 1401 aaKnown RBP10.21□□□□□ -0.78
CPA4-208ENST00000490117 PHRF1Q9P1Y6 1649 aaKnown RBP10.21□□□□□ -0.78
CPA4-208ENST00000490117 PER1O15534 1290 aaPredicted RBP10.2□□□□□ -0.78
CPA4-208ENST00000490117 PPP4R3CPQ6ZMV5 832 aa10.2□□□□□ -0.78
CPA4-208ENST00000490117 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
CPA4-208ENST00000490117 PXDNQ92626 1479 aa10.19□□□□□ -0.78
CPA4-208ENST00000490117 FOXO3O43524 673 aa10.19□□□□□ -0.78
CPA4-208ENST00000490117 PLEKHG5O94827 1062 aa10.19□□□□□ -0.78
CPA4-208ENST00000490117 BRINP3Q76B58 766 aa10.19□□□□□ -0.78
CPA4-208ENST00000490117 NME9Q86XW9 330 aa10.19□□□□□ -0.78
CPA4-208ENST00000490117 MIER1Q8N108 512 aa10.19□□□□□ -0.78
CPA4-208ENST00000490117 SLAIN2Q9P270 581 aa10.19□□□□□ -0.78
CPA4-208ENST00000490117 KNSTRNQ9Y448 316 aa10.19□□□□□ -0.78
CPA4-208ENST00000490117 RGPD5Q99666 1765 aa10.19□□□□□ -0.78
CPA4-208ENST00000490117 IQSEC2Q5JU85 1478 aa10.18□□□□□ -0.78
CPA4-208ENST00000490117 SSH2Q76I76 1423 aa10.18□□□□□ -0.78
CPA4-208ENST00000490117 TTC21BQ7Z4L5 1316 aa10.18□□□□□ -0.78
CPA4-208ENST00000490117 PIP4K2BP78356 416 aa10.18□□□□□ -0.78
CPA4-208ENST00000490117 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
CPA4-208ENST00000490117 CERKQ8TCT0 537 aa10.18□□□□□ -0.78
CPA4-208ENST00000490117 GGNBP2Q9H3C7 697 aa10.18□□□□□ -0.78
CPA4-208ENST00000490117 COL16A1Q07092 1604 aaPredicted RBP10.18□□□□□ -0.78
CPA4-208ENST00000490117 AHDC1Q5TGY3 1603 aaPredicted RBP10.18□□□□□ -0.78
CPA4-208ENST00000490117 UBAP1LF5GYI3 381 aa10.17□□□□□ -0.78
CPA4-208ENST00000490117 ANP32CO43423 234 aa10.17□□□□□ -0.78
CPA4-208ENST00000490117 PAK3O75914 559 aaPredicted RBP10.17□□□□□ -0.78
CPA4-208ENST00000490117 KCNA4P22459 653 aa10.17□□□□□ -0.78
CPA4-208ENST00000490117 NUTM2GQ5VZR2 741 aa10.17□□□□□ -0.78
CPA4-208ENST00000490117 PEAK1Q9H792 1746 aa10.16□□□□□ -0.78
CPA4-208ENST00000490117 PSME1Q06323 249 aa10.16□□□□□ -0.78
CPA4-208ENST00000490117 KRT28Q7Z3Y7 464 aa10.16□□□□□ -0.78
CPA4-208ENST00000490117 OVOS2A0A0J9YW53 1432 aa10.16□□□□□ -0.78
CPA4-208ENST00000490117 OVOS2Q6IE36 1432 aa10.16□□□□□ -0.78
CPA4-208ENST00000490117 PARD3Q8TEW0 1356 aa10.15□□□□□ -0.78
CPA4-208ENST00000490117 CGNL1Q0VF96 1302 aa10.15□□□□□ -0.78
CPA4-208ENST00000490117 MED1Q15648 1581 aaPredicted RBP10.15□□□□□ -0.78
CPA4-208ENST00000490117 TNNT2P45379 298 aaPredicted RBP10.15□□□□□ -0.78
CPA4-208ENST00000490117 PRKRIP1Q9H875 184 aaPredicted RBP10.15□□□□□ -0.78
CPA4-208ENST00000490117 RGPD2P0DJD1 1756 aa10.14□□□□□ -0.79
CPA4-208ENST00000490117 NPHP3Q7Z494 1330 aa10.14□□□□□ -0.79
CPA4-208ENST00000490117 FYB1O15117 783 aa10.14□□□□□ -0.79
CPA4-208ENST00000490117 SOX12O15370 315 aa10.14□□□□□ -0.79
CPA4-208ENST00000490117 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
CPA4-208ENST00000490117 ZNF692Q9BU19 519 aaPredicted RBP10.14□□□□□ -0.79
CPA4-208ENST00000490117 SHPRHQ149N8 1683 aa10.14□□□□□ -0.79
CPA4-208ENST00000490117 TNS3Q68CZ2 1445 aa10.14□□□□□ -0.79
CPA4-208ENST00000490117 FBLN1P23142 703 aa10.13□□□□□ -0.79
CPA4-208ENST00000490117 MORC1Q86VD1 984 aa10.13□□□□□ -0.79
CPA4-208ENST00000490117 NSD2O96028 1365 aa10.13□□□□□ -0.79
CPA4-208ENST00000490117 NPC1L1Q9UHC9 1359 aa10.13□□□□□ -0.79
CPA4-208ENST00000490117 SLIT3O75094 1523 aa10.12□□□□□ -0.79
CPA4-208ENST00000490117 TTC21AQ8NDW8 1320 aa10.12□□□□□ -0.79
CPA4-208ENST00000490117 COL22A1Q8NFW1 1626 aaPredicted RBP10.12□□□□□ -0.79
CPA4-208ENST00000490117 TOM1O60784 492 aa10.12□□□□□ -0.79
CPA4-208ENST00000490117 CCDC184Q52MB2 194 aa10.12□□□□□ -0.79
CPA4-208ENST00000490117 NFAT5O94916 1531 aa10.12□□□□□ -0.79
CPA4-208ENST00000490117 ABTB2Q8N961 1025 aa10.11□□□□□ -0.79
CPA4-208ENST00000490117 SBNO1A3KN83 1393 aa10.11□□□□□ -0.79
CPA4-208ENST00000490117 SOS2Q07890 1332 aaPredicted RBP10.1□□□□□ -0.79
CPA4-208ENST00000490117 MYBBP1AQ9BQG0 1328 aaKnown RBP10.1□□□□□ -0.79
CPA4-208ENST00000490117 DCAF8L1A6NGE4 600 aa10.1□□□□□ -0.79
CPA4-208ENST00000490117 PPP2R1AP30153 589 aa10.1□□□□□ -0.79
CPA4-208ENST00000490117 NLRP6P59044 892 aa10.1□□□□□ -0.79
CPA4-208ENST00000490117 COG3Q96JB2 828 aa10.1□□□□□ -0.79
CPA4-208ENST00000490117 BRD4O60885 1362 aaPredicted RBP10.1□□□□□ -0.79
CPA4-208ENST00000490117 USP31Q70CQ4 1352 aa10.1□□□□□ -0.79
CPA4-208ENST00000490117 SPATA31A3Q5VYP0 1347 aa10.09□□□□□ -0.79
CPA4-208ENST00000490117 COL18A1P39060 1754 aa10.09□□□□□ -0.79
CPA4-208ENST00000490117 ZBTB7CA1YPR0 619 aa10.09□□□□□ -0.79
CPA4-208ENST00000490117 HOXD11P31277 338 aaPredicted RBP10.09□□□□□ -0.79
CPA4-208ENST00000490117 RALBP1Q15311 655 aa10.09□□□□□ -0.79
CPA4-208ENST00000490117 CABLES1Q8TDN4 633 aa10.09□□□□□ -0.79
CPA4-208ENST00000490117 PLCH1Q4KWH8 1693 aa10.09□□□□□ -0.79
CPA4-208ENST00000490117 CACNB1Q02641 598 aaPredicted RBP10.08□□□□□ -0.8
CPA4-208ENST00000490117 RRS1Q15050 365 aaKnown RBP10.08□□□□□ -0.8
CPA4-208ENST00000490117 COL3A1P02461 1466 aaPredicted RBP10.07□□□□□ -0.8
CPA4-208ENST00000490117 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
CPA4-208ENST00000490117 USP19O94966 1318 aa10.07□□□□□ -0.8
CPA4-208ENST00000490117 ARHGEF10O15013 1369 aa10.06□□□□□ -0.8
CPA4-208ENST00000490117 PNPLA6Q8IY17 1366 aa10.06□□□□□ -0.8
CPA4-208ENST00000490117 PPM1GO15355 546 aaPredicted RBP10.06□□□□□ -0.8
CPA4-208ENST00000490117 NLRP13Q86W25 1043 aa10.06□□□□□ -0.8
CPA4-208ENST00000490117 CNKSR2Q8WXI2 1034 aa10.06□□□□□ -0.8
CPA4-208ENST00000490117 MRS2Q9HD23 443 aa10.06□□□□□ -0.8
CPA4-208ENST00000490117 SMG6Q86US8 1419 aaKnown RBP10.06□□□□□ -0.8
CPA4-208ENST00000490117 CDK12Q9NYV4 1490 aaPredicted RBP10.05□□□□□ -0.8
CPA4-208ENST00000490117 RGPD1P0DJD0 1748 aa10.05□□□□□ -0.8
CPA4-208ENST00000490117 MTHFSP49914 203 aa10.05□□□□□ -0.8
CPA4-208ENST00000490117 LMO7Q8WWI1 1683 aa10.05□□□□□ -0.8
CPA4-208ENST00000490117 MAP3K19Q56UN5 1328 aa10.05□□□□□ -0.8
CPA4-208ENST00000490117 POLKQ9UBT6 870 aa10.04□□□□□ -0.8
CPA4-208ENST00000490117 COL14A1Q05707 1796 aaKnown RBP10.03□□□□□ -0.8
CPA4-208ENST00000490117 AATKQ6ZMQ8 1374 aa10.03□□□□□ -0.8
CPA4-208ENST00000490117 VIRMAQ69YN4 1812 aaKnown RBP10.03□□□□□ -0.8
CPA4-208ENST00000490117 CCER2I3L3R5 266 aa10.03□□□□□ -0.8
CPA4-208ENST00000490117 HSPA1LP34931 641 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms